RNA–Protein interactions for RNA: ENST00000541570.6

PPFIA2-205, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2 BASIC

Gene PPFIA2, Length 2,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-205ENST00000541570 NISCHQ9Y2I1 1504 aa16.1■□□□□ 0.17
PPFIA2-205ENST00000541570 CCDC180Q9P1Z9 1646 aa14.11□□□□□ -0.15
PPFIA2-205ENST00000541570 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
PPFIA2-205ENST00000541570 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
PPFIA2-205ENST00000541570 MYO15BQ96JP2 1530 aa13.32□□□□□ -0.28
PPFIA2-205ENST00000541570 NACADO15069 1562 aa13.05□□□□□ -0.32
PPFIA2-205ENST00000541570 SHROOM4Q9ULL8 1493 aa12.89□□□□□ -0.35
PPFIA2-205ENST00000541570 DCAF8L2P0C7V8 631 aa12.84□□□□□ -0.35
PPFIA2-205ENST00000541570 RB1CC1Q8TDY2 1594 aa12.84□□□□□ -0.35
PPFIA2-205ENST00000541570 ABCC9O60706 1549 aa12.8□□□□□ -0.36
PPFIA2-205ENST00000541570 SCRIBQ14160 1630 aa12.71□□□□□ -0.38
PPFIA2-205ENST00000541570 SUPT5HO00267 1087 aaKnown RBP12.54□□□□□ -0.4
PPFIA2-205ENST00000541570 UNC13AQ9UPW8 1703 aa12.52□□□□□ -0.41
PPFIA2-205ENST00000541570 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
PPFIA2-205ENST00000541570 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.42
PPFIA2-205ENST00000541570 BICRAQ9NZM4 1560 aa12.37□□□□□ -0.43
PPFIA2-205ENST00000541570 MROH2BQ7Z745 1585 aa12.35□□□□□ -0.43
PPFIA2-205ENST00000541570 CECR2Q9BXF3 1484 aa12.34□□□□□ -0.43
PPFIA2-205ENST00000541570 SMARCA4P51532 1647 aa12.33□□□□□ -0.43
PPFIA2-205ENST00000541570 PEG3Q9GZU2 1588 aa12.31□□□□□ -0.44
PPFIA2-205ENST00000541570 CHIC1Q5VXU3 224 aa12.27□□□□□ -0.44
PPFIA2-205ENST00000541570 TOP2AP11388 1531 aaKnown RBP12.26□□□□□ -0.45
PPFIA2-205ENST00000541570 WIZO95785 1651 aa12.25□□□□□ -0.45
PPFIA2-205ENST00000541570 SMARCA2P51531 1590 aa12.15□□□□□ -0.47
PPFIA2-205ENST00000541570 EIF4G1Q04637 1599 aaKnown RBP12.13□□□□□ -0.47
PPFIA2-205ENST00000541570 ATAD2BQ9ULI0 1458 aa12.05□□□□□ -0.48
PPFIA2-205ENST00000541570 HMGXB3Q12766 1538 aa12.04□□□□□ -0.48
PPFIA2-205ENST00000541570 CCDC88BA6NC98 1476 aa12.04□□□□□ -0.48
PPFIA2-205ENST00000541570 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
PPFIA2-205ENST00000541570 NCAPD3P42695 1498 aa12□□□□□ -0.49
PPFIA2-205ENST00000541570 BAZ1BQ9UIG0 1483 aaKnown RBP11.98□□□□□ -0.49
PPFIA2-205ENST00000541570 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
PPFIA2-205ENST00000541570 EEA1Q15075 1411 aa11.87□□□□□ -0.51
PPFIA2-205ENST00000541570 PRDM2Q13029 1718 aa11.82□□□□□ -0.52
PPFIA2-205ENST00000541570 WRNQ14191 1432 aaPredicted RBP eCLIP11.76□□□□□ -0.53
PPFIA2-205ENST00000541570 CFTRP13569 1480 aa11.75□□□□□ -0.53
PPFIA2-205ENST00000541570 BIVM-ERCC5R4GMW8 1640 aa11.75□□□□□ -0.53
PPFIA2-205ENST00000541570 ABCC8Q09428 1581 aa11.74□□□□□ -0.53
PPFIA2-205ENST00000541570 TOP2BQ02880 1626 aa11.73□□□□□ -0.53
PPFIA2-205ENST00000541570 CC2D2AQ9P2K1 1620 aa11.71□□□□□ -0.53
PPFIA2-205ENST00000541570 SYNJ1O43426 1573 aa11.68□□□□□ -0.54
PPFIA2-205ENST00000541570 KIF21BO75037 1637 aa11.65□□□□□ -0.54
PPFIA2-205ENST00000541570 LOC105371045A0A1W2PR82 267 aa11.64□□□□□ -0.55
PPFIA2-205ENST00000541570 CADPSQ9ULU8 1353 aa11.63□□□□□ -0.55
PPFIA2-205ENST00000541570 TNIKQ9UKE5 1360 aa11.61□□□□□ -0.55
PPFIA2-205ENST00000541570 CEP164Q9UPV0 1460 aa11.59□□□□□ -0.55
PPFIA2-205ENST00000541570 CSRNP3Q8WYN3 585 aa11.59□□□□□ -0.55
PPFIA2-205ENST00000541570 GOLGA3Q08378 1498 aa11.59□□□□□ -0.55
PPFIA2-205ENST00000541570 LAMC3Q9Y6N6 1575 aa11.57□□□□□ -0.56
PPFIA2-205ENST00000541570 SOGA1O94964 1423 aa11.57□□□□□ -0.56
PPFIA2-205ENST00000541570 ERICH3Q5RHP9 1530 aa11.56□□□□□ -0.56
PPFIA2-205ENST00000541570 CUX1P39880 1505 aa11.56□□□□□ -0.56
PPFIA2-205ENST00000541570 TRIM26Q12899 539 aaPredicted RBP11.5□□□□□ -0.57
PPFIA2-205ENST00000541570 FAM9AQ8IZU1 332 aaPredicted RBP11.49□□□□□ -0.57
PPFIA2-205ENST00000541570 KIF27Q86VH2 1401 aa11.49□□□□□ -0.57
PPFIA2-205ENST00000541570 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
PPFIA2-205ENST00000541570 PRXQ9BXM0 1461 aa11.48□□□□□ -0.57
PPFIA2-205ENST00000541570 RUSC2Q8N2Y8 1516 aa11.48□□□□□ -0.57
PPFIA2-205ENST00000541570 FANCD2Q9BXW9 1451 aa11.47□□□□□ -0.57
PPFIA2-205ENST00000541570 CEP162Q5TB80 1403 aa11.47□□□□□ -0.57
PPFIA2-205ENST00000541570 PDS5BQ9NTI5 1447 aa11.42□□□□□ -0.58
PPFIA2-205ENST00000541570 ABCA10Q8WWZ4 1543 aa11.39□□□□□ -0.59
PPFIA2-205ENST00000541570 FGD5Q6ZNL6 1462 aa11.39□□□□□ -0.59
PPFIA2-205ENST00000541570 TOPBP1Q92547 1522 aa11.38□□□□□ -0.59
PPFIA2-205ENST00000541570 WDR97A6NE52 1622 aa11.37□□□□□ -0.59
PPFIA2-205ENST00000541570 RAPGEF2Q9Y4G8 1499 aa11.37□□□□□ -0.59
PPFIA2-205ENST00000541570 CUL7Q14999 1698 aa11.36□□□□□ -0.59
PPFIA2-205ENST00000541570 CLIP1P30622 1438 aa11.35□□□□□ -0.59
PPFIA2-205ENST00000541570 UBTFP17480 764 aaKnown RBP11.34□□□□□ -0.59
PPFIA2-205ENST00000541570 PCGF6Q9BYE7 350 aa11.34□□□□□ -0.59
PPFIA2-205ENST00000541570 HRCP23327 699 aa11.33□□□□□ -0.6
PPFIA2-205ENST00000541570 VPS8Q8N3P4 1428 aa11.33□□□□□ -0.6
PPFIA2-205ENST00000541570 CUX2O14529 1486 aa11.33□□□□□ -0.6
PPFIA2-205ENST00000541570 IGF1RP08069 1367 aa11.32□□□□□ -0.6
PPFIA2-205ENST00000541570 POLA1P09884 1462 aaPredicted RBP11.32□□□□□ -0.6
PPFIA2-205ENST00000541570 URB2Q14146 1524 aaKnown RBP11.29□□□□□ -0.6
PPFIA2-205ENST00000541570 NESP48681 1621 aa11.29□□□□□ -0.6
PPFIA2-205ENST00000541570 ABCA5Q8WWZ7 1642 aa11.28□□□□□ -0.6
PPFIA2-205ENST00000541570 KIF21AQ7Z4S6 1674 aa11.28□□□□□ -0.6
PPFIA2-205ENST00000541570 ZEB1P37275 1124 aaPredicted RBP11.28□□□□□ -0.6
PPFIA2-205ENST00000541570 MAP3K1Q13233 1512 aa11.27□□□□□ -0.61
PPFIA2-205ENST00000541570 CARMIL1Q5VZK9 1371 aa11.26□□□□□ -0.61
PPFIA2-205ENST00000541570 MRC2Q9UBG0 1479 aa11.25□□□□□ -0.61
PPFIA2-205ENST00000541570 TARBP1Q13395 1621 aaKnown RBP11.24□□□□□ -0.61
PPFIA2-205ENST00000541570 EFCAB5A4FU69 1503 aa11.23□□□□□ -0.61
PPFIA2-205ENST00000541570 WDR62O43379 1518 aa11.22□□□□□ -0.61
PPFIA2-205ENST00000541570 ARAP1Q96P48 1450 aa11.21□□□□□ -0.61
PPFIA2-205ENST00000541570 CTTNBP2Q8WZ74 1663 aa11.21□□□□□ -0.61
PPFIA2-205ENST00000541570 RAD54L2Q9Y4B4 1467 aa11.18□□□□□ -0.62
PPFIA2-205ENST00000541570 GAPVD1Q14C86 1478 aa11.18□□□□□ -0.62
PPFIA2-205ENST00000541570 ARHGAP35Q9NRY4 1499 aa11.18□□□□□ -0.62
PPFIA2-205ENST00000541570 AQRO60306 1485 aaKnown RBP eCLIP11.17□□□□□ -0.62
PPFIA2-205ENST00000541570 IFT140Q96RY7 1462 aa11.17□□□□□ -0.62
PPFIA2-205ENST00000541570 FHAD1B1AJZ9 1412 aa11.16□□□□□ -0.62
PPFIA2-205ENST00000541570 EHMT2Q96KQ7 1210 aa11.15□□□□□ -0.62
PPFIA2-205ENST00000541570 PBRM1Q86U86 1689 aa11.15□□□□□ -0.62
PPFIA2-205ENST00000541570 APLP2Q06481 763 aa11.14□□□□□ -0.63
PPFIA2-205ENST00000541570 SAMD9Q5K651 1589 aa11.12□□□□□ -0.63
PPFIA2-205ENST00000541570 GRIN2BQ13224 1484 aa11.11□□□□□ -0.63
PPFIA2-205ENST00000541570 THOC2Q8NI27 1593 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms