RNA–Protein interactions for RNA: ENST00000541542.1

CCND2-204, Transcript of cyclin D2, humanhuman

TSL 3

Gene CCND2, Length 322 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND2-204ENST00000541542 NISCHQ9Y2I1 1504 aa20.77■□□□□ 0.92
CCND2-204ENST00000541542 ABCC9O60706 1549 aa19.04■□□□□ 0.64
CCND2-204ENST00000541542 CCDC180Q9P1Z9 1646 aa18.8■□□□□ 0.6
CCND2-204ENST00000541542 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
CCND2-204ENST00000541542 RB1CC1Q8TDY2 1594 aa17.97■□□□□ 0.47
CCND2-204ENST00000541542 NACADO15069 1562 aa17.78■□□□□ 0.44
CCND2-204ENST00000541542 UNC13AQ9UPW8 1703 aa17.69■□□□□ 0.42
CCND2-204ENST00000541542 PABPN1Q86U42 306 aaKnown RBP eCLIP17.63■□□□□ 0.41
CCND2-204ENST00000541542 BICRAQ9NZM4 1560 aa17.54■□□□□ 0.4
CCND2-204ENST00000541542 DCAF8L2P0C7V8 631 aa17.53■□□□□ 0.4
CCND2-204ENST00000541542 MYO15BQ96JP2 1530 aa17.43■□□□□ 0.38
CCND2-204ENST00000541542 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
CCND2-204ENST00000541542 ZCCHC6Q5VYS8 1495 aaKnown RBP17.19■□□□□ 0.34
CCND2-204ENST00000541542 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
CCND2-204ENST00000541542 CECR2Q9BXF3 1484 aa17.16■□□□□ 0.34
CCND2-204ENST00000541542 SCRIBQ14160 1630 aa17.13■□□□□ 0.33
CCND2-204ENST00000541542 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
CCND2-204ENST00000541542 EIF4G1Q04637 1599 aaKnown RBP17.1■□□□□ 0.33
CCND2-204ENST00000541542 DNAJC5Q9H3Z4 198 aa16.74■□□□□ 0.27
CCND2-204ENST00000541542 CUX2O14529 1486 aa16.48■□□□□ 0.23
CCND2-204ENST00000541542 NCAPD3P42695 1498 aa16.41■□□□□ 0.22
CCND2-204ENST00000541542 ERCC6Q03468 1493 aa16.41■□□□□ 0.22
CCND2-204ENST00000541542 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
CCND2-204ENST00000541542 NESP48681 1621 aa16.3■□□□□ 0.2
CCND2-204ENST00000541542 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
CCND2-204ENST00000541542 HMGXB3Q12766 1538 aa16.3■□□□□ 0.2
CCND2-204ENST00000541542 SMARCA2P51531 1590 aa16.26■□□□□ 0.19
CCND2-204ENST00000541542 THOC2Q8NI27 1593 aaKnown RBP16.23■□□□□ 0.19
CCND2-204ENST00000541542 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
CCND2-204ENST00000541542 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
CCND2-204ENST00000541542 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
CCND2-204ENST00000541542 KIF21AQ7Z4S6 1674 aa16.12■□□□□ 0.17
CCND2-204ENST00000541542 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
CCND2-204ENST00000541542 MROH2BQ7Z745 1585 aa16.03■□□□□ 0.16
CCND2-204ENST00000541542 PDS5BQ9NTI5 1447 aa15.95■□□□□ 0.14
CCND2-204ENST00000541542 WDR62O43379 1518 aa15.9■□□□□ 0.14
CCND2-204ENST00000541542 TRIM41Q8WV44 630 aa15.9■□□□□ 0.14
CCND2-204ENST00000541542 MRC2Q9UBG0 1479 aa15.9■□□□□ 0.14
CCND2-204ENST00000541542 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
CCND2-204ENST00000541542 WIZO95785 1651 aa15.85■□□□□ 0.13
CCND2-204ENST00000541542 CEP164Q9UPV0 1460 aa15.77■□□□□ 0.11
CCND2-204ENST00000541542 FANCD2Q9BXW9 1451 aa15.73■□□□□ 0.11
CCND2-204ENST00000541542 CFTRP13569 1480 aa15.67■□□□□ 0.1
CCND2-204ENST00000541542 URB2Q14146 1524 aaKnown RBP15.67■□□□□ 0.1
CCND2-204ENST00000541542 TOP2AP11388 1531 aaKnown RBP15.6■□□□□ 0.09
CCND2-204ENST00000541542 OSCARQ8IYS5 282 aa15.6■□□□□ 0.09
CCND2-204ENST00000541542 RIMBP3CA6NJZ7 1639 aa15.57■□□□□ 0.08
CCND2-204ENST00000541542 RIMBP3BA6NNM3 1639 aa15.57■□□□□ 0.08
CCND2-204ENST00000541542 RIMBP3Q9UFD9 1639 aa15.57■□□□□ 0.08
CCND2-204ENST00000541542 PRDM2Q13029 1718 aa15.57■□□□□ 0.08
CCND2-204ENST00000541542 RSF1Q96T23 1441 aaPredicted RBP15.56■□□□□ 0.08
CCND2-204ENST00000541542 ZNF608Q9ULD9 1512 aaPredicted RBP15.52■□□□□ 0.07
CCND2-204ENST00000541542 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
CCND2-204ENST00000541542 IFT140Q96RY7 1462 aa15.45■□□□□ 0.06
CCND2-204ENST00000541542 EIF4G3O43432 1585 aaKnown RBP15.45■□□□□ 0.06
CCND2-204ENST00000541542 TOPBP1Q92547 1522 aa15.43■□□□□ 0.06
CCND2-204ENST00000541542 CCDC88BA6NC98 1476 aa15.4■□□□□ 0.06
CCND2-204ENST00000541542 CHD1O14646 1710 aa15.39■□□□□ 0.05
CCND2-204ENST00000541542 DNMBPQ6XZF7 1577 aa15.35■□□□□ 0.05
CCND2-204ENST00000541542 TARBP1Q13395 1621 aaKnown RBP15.34■□□□□ 0.05
CCND2-204ENST00000541542 ARAP1Q96P48 1450 aa15.32■□□□□ 0.04
CCND2-204ENST00000541542 AQRO60306 1485 aaKnown RBP eCLIP15.3■□□□□ 0.042e-6■□□□□ 10.6
CCND2-204ENST00000541542 CYB5RLQ6IPT4 315 aa15.28■□□□□ 0.04
CCND2-204ENST00000541542 ABCC8Q09428 1581 aa15.28■□□□□ 0.04
CCND2-204ENST00000541542 POLA1P09884 1462 aaPredicted RBP15.26■□□□□ 0.03
CCND2-204ENST00000541542 RAD54L2Q9Y4B4 1467 aa15.2■□□□□ 0.02
CCND2-204ENST00000541542 CLASP1Q7Z460 1538 aa15.18■□□□□ 0.02
CCND2-204ENST00000541542 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
CCND2-204ENST00000541542 FBLN2P98095 1184 aa15.17■□□□□ 0.02
CCND2-204ENST00000541542 SNAPC4Q5SXM2 1469 aa15.15■□□□□ 0.02
CCND2-204ENST00000541542 TDRD9Q8NDG6 1382 aaKnown RBP15.14■□□□□ 0.01
CCND2-204ENST00000541542 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
CCND2-204ENST00000541542 SOGA1O94964 1423 aa15.11■□□□□ 0.01
CCND2-204ENST00000541542 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
CCND2-204ENST00000541542 CUX1P39880 1505 aa15.09■□□□□ 0.01
CCND2-204ENST00000541542 SYNJ1O43426 1573 aa15.09■□□□□ 0.01
CCND2-204ENST00000541542 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0
CCND2-204ENST00000541542 PBRM1Q86U86 1689 aa15.05■□□□□ -0
CCND2-204ENST00000541542 SYNJ2O15056 1496 aa15.03■□□□□ -0
CCND2-204ENST00000541542 GRIN2BQ13224 1484 aa15.03■□□□□ -0
CCND2-204ENST00000541542 CHMP7Q8WUX9 453 aaPredicted RBP15□□□□□ -0.01
CCND2-204ENST00000541542 GAPVD1Q14C86 1478 aa14.98□□□□□ -0.01
CCND2-204ENST00000541542 ABCA5Q8WWZ7 1642 aa14.98□□□□□ -0.01
CCND2-204ENST00000541542 ERCC6L2Q5T890 1561 aa14.96□□□□□ -0.01
CCND2-204ENST00000541542 ABCA10Q8WWZ4 1543 aa14.91□□□□□ -0.02
CCND2-204ENST00000541542 AEBP2Q6ZN18 517 aaPredicted RBP14.89□□□□□ -0.03
CCND2-204ENST00000541542 ADAMTS12P58397 1594 aa14.88□□□□□ -0.03
CCND2-204ENST00000541542 CEP170Q5SW79 1584 aa14.88□□□□□ -0.03
CCND2-204ENST00000541542 GRIN2AQ12879 1464 aa14.88□□□□□ -0.03
CCND2-204ENST00000541542 SHROOM2Q13796 1616 aa14.84□□□□□ -0.03
CCND2-204ENST00000541542 NUP160Q12769 1436 aa14.83□□□□□ -0.03
CCND2-204ENST00000541542 KIF13AQ9H1H9 1805 aa14.82□□□□□ -0.04
CCND2-204ENST00000541542 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.04
CCND2-204ENST00000541542 TOP2BQ02880 1626 aa14.75□□□□□ -0.05
CCND2-204ENST00000541542 WRNQ14191 1432 aaPredicted RBP eCLIP14.75□□□□□ -0.05
CCND2-204ENST00000541542 FHAD1B1AJZ9 1412 aa14.73□□□□□ -0.05
CCND2-204ENST00000541542 ERICH3Q5RHP9 1530 aa14.71□□□□□ -0.05
CCND2-204ENST00000541542 RUSC2Q8N2Y8 1516 aa14.69□□□□□ -0.06
CCND2-204ENST00000541542 PRG4Q92954 1404 aaPredicted RBP14.68□□□□□ -0.06
CCND2-204ENST00000541542 DIP2BQ9P265 1576 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms