RNA–Protein interactions for RNA: ENST00000541473.1

TMEM216-204, Transcript of transmembrane protein 216, humanhuman

TSL 3

Gene TMEM216, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM216-204ENST00000541473 NISCHQ9Y2I1 1504 aa30.43■■■□□ 2.46
TMEM216-204ENST00000541473 CCDC180Q9P1Z9 1646 aa27.35■■□□□ 1.97
TMEM216-204ENST00000541473 ABCC9O60706 1549 aa27.08■■□□□ 1.93
TMEM216-204ENST00000541473 RB1CC1Q8TDY2 1594 aa25.92■■□□□ 1.74
TMEM216-204ENST00000541473 DCAF8L2P0C7V8 631 aa25.74■■□□□ 1.71
TMEM216-204ENST00000541473 NACADO15069 1562 aa25.73■■□□□ 1.71
TMEM216-204ENST00000541473 UNC13AQ9UPW8 1703 aa25.38■■□□□ 1.65
TMEM216-204ENST00000541473 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
TMEM216-204ENST00000541473 ZCCHC6Q5VYS8 1495 aaKnown RBP25.28■■□□□ 1.64
TMEM216-204ENST00000541473 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
TMEM216-204ENST00000541473 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
TMEM216-204ENST00000541473 BICRAQ9NZM4 1560 aa25.01■■□□□ 1.59
TMEM216-204ENST00000541473 DNAJC5BQ9UF47 199 aa24.99■■□□□ 1.59
TMEM216-204ENST00000541473 SCRIBQ14160 1630 aa24.95■■□□□ 1.58
TMEM216-204ENST00000541473 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
TMEM216-204ENST00000541473 CC2D2AQ9P2K1 1620 aa24.49■■□□□ 1.51
TMEM216-204ENST00000541473 EIF4G1Q04637 1599 aaKnown RBP24.46■■□□□ 1.51
TMEM216-204ENST00000541473 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
TMEM216-204ENST00000541473 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
TMEM216-204ENST00000541473 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
TMEM216-204ENST00000541473 BAZ1AQ9NRL2 1556 aaPredicted RBP23.69■■□□□ 1.38
TMEM216-204ENST00000541473 NCAPD3P42695 1498 aa23.65■■□□□ 1.38
TMEM216-204ENST00000541473 ATAD2BQ9ULI0 1458 aa23.64■■□□□ 1.38
TMEM216-204ENST00000541473 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
TMEM216-204ENST00000541473 BAZ1BQ9UIG0 1483 aaKnown RBP23.54■■□□□ 1.36
TMEM216-204ENST00000541473 ERCC6Q03468 1493 aa23.46■■□□□ 1.35
TMEM216-204ENST00000541473 MROH2BQ7Z745 1585 aa23.44■■□□□ 1.34
TMEM216-204ENST00000541473 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
TMEM216-204ENST00000541473 NESP48681 1621 aa23.27■■□□□ 1.32
TMEM216-204ENST00000541473 WIZO95785 1651 aa23.27■■□□□ 1.32
TMEM216-204ENST00000541473 CUX2O14529 1486 aa23.24■■□□□ 1.31
TMEM216-204ENST00000541473 LAMC3Q9Y6N6 1575 aa23.23■■□□□ 1.31
TMEM216-204ENST00000541473 KIF21AQ7Z4S6 1674 aa23.13■■□□□ 1.29
TMEM216-204ENST00000541473 PDS5BQ9NTI5 1447 aa23.06■■□□□ 1.28
TMEM216-204ENST00000541473 THOC2Q8NI27 1593 aaKnown RBP23.05■■□□□ 1.28
TMEM216-204ENST00000541473 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
TMEM216-204ENST00000541473 CADPSQ9ULU8 1353 aa22.98■■□□□ 1.27
TMEM216-204ENST00000541473 TOP2AP11388 1531 aaKnown RBP22.97■■□□□ 1.27
TMEM216-204ENST00000541473 DNAJC5Q9H3Z4 198 aa22.87■■□□□ 1.25
TMEM216-204ENST00000541473 MRC2Q9UBG0 1479 aa22.85■■□□□ 1.25
TMEM216-204ENST00000541473 CEP164Q9UPV0 1460 aa22.84■■□□□ 1.25
TMEM216-204ENST00000541473 PRDM2Q13029 1718 aa22.8■■□□□ 1.24
TMEM216-204ENST00000541473 FANCD2Q9BXW9 1451 aa22.78■■□□□ 1.24
TMEM216-204ENST00000541473 WDR62O43379 1518 aa22.77■■□□□ 1.24
TMEM216-204ENST00000541473 CFTRP13569 1480 aa22.75■■□□□ 1.23
TMEM216-204ENST00000541473 CCDC88BA6NC98 1476 aa22.63■■□□□ 1.21
TMEM216-204ENST00000541473 URB2Q14146 1524 aaKnown RBP22.53■■□□□ 1.2
TMEM216-204ENST00000541473 ABCC8Q09428 1581 aa22.38■■□□□ 1.17
TMEM216-204ENST00000541473 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
TMEM216-204ENST00000541473 DNMBPQ6XZF7 1577 aa22.35■■□□□ 1.17
TMEM216-204ENST00000541473 IFT140Q96RY7 1462 aa22.33■■□□□ 1.16
TMEM216-204ENST00000541473 SUPT5HO00267 1087 aaKnown RBP22.28■■□□□ 1.16
TMEM216-204ENST00000541473 EIF4G3O43432 1585 aaKnown RBP22.22■■□□□ 1.15
TMEM216-204ENST00000541473 ZNF608Q9ULD9 1512 aaPredicted RBP22.21■■□□□ 1.15
TMEM216-204ENST00000541473 OSCARQ8IYS5 282 aa22.2■■□□□ 1.14
TMEM216-204ENST00000541473 TARBP1Q13395 1621 aaKnown RBP22.14■■□□□ 1.14
TMEM216-204ENST00000541473 TRIM41Q8WV44 630 aa22.14■■□□□ 1.13
TMEM216-204ENST00000541473 POLA1P09884 1462 aaPredicted RBP22.13■■□□□ 1.13
TMEM216-204ENST00000541473 CHD1O14646 1710 aa22.09■■□□□ 1.13
TMEM216-204ENST00000541473 FGD5Q6ZNL6 1462 aa22.06■■□□□ 1.12
TMEM216-204ENST00000541473 AQRO60306 1485 aaKnown RBP eCLIP22.05■■□□□ 1.12
TMEM216-204ENST00000541473 SOGA1O94964 1423 aa22.05■■□□□ 1.12
TMEM216-204ENST00000541473 RAD54L2Q9Y4B4 1467 aa22.04■■□□□ 1.12
TMEM216-204ENST00000541473 CUX1P39880 1505 aa22.03■■□□□ 1.12
TMEM216-204ENST00000541473 WDR97A6NE52 1622 aa22■■□□□ 1.11
TMEM216-204ENST00000541473 FBLN2P98095 1184 aa21.99■■□□□ 1.11
TMEM216-204ENST00000541473 RIMBP3CA6NJZ7 1639 aa21.95■■□□□ 1.1
TMEM216-204ENST00000541473 RIMBP3BA6NNM3 1639 aa21.95■■□□□ 1.1
TMEM216-204ENST00000541473 RIMBP3Q9UFD9 1639 aa21.95■■□□□ 1.1
TMEM216-204ENST00000541473 TDRD9Q8NDG6 1382 aaKnown RBP21.95■■□□□ 1.1
TMEM216-204ENST00000541473 PBRM1Q86U86 1689 aa21.93■■□□□ 1.1
TMEM216-204ENST00000541473 SNAPC4Q5SXM2 1469 aa21.9■■□□□ 1.1
TMEM216-204ENST00000541473 ARHGEF11O15085 1522 aa21.86■■□□□ 1.09
TMEM216-204ENST00000541473 GRIN2BQ13224 1484 aa21.85■■□□□ 1.09
TMEM216-204ENST00000541473 MAGI1Q96QZ7 1491 aaPredicted RBP21.84■■□□□ 1.09
TMEM216-204ENST00000541473 BIVM-ERCC5R4GMW8 1640 aa21.82■■□□□ 1.08
TMEM216-204ENST00000541473 CHMP7Q8WUX9 453 aaPredicted RBP21.81■■□□□ 1.08
TMEM216-204ENST00000541473 GAPVD1Q14C86 1478 aa21.81■■□□□ 1.08
TMEM216-204ENST00000541473 SYNJ1O43426 1573 aa21.81■■□□□ 1.08
TMEM216-204ENST00000541473 TOP2BQ02880 1626 aa21.79■■□□□ 1.08
TMEM216-204ENST00000541473 ABCA5Q8WWZ7 1642 aa21.78■■□□□ 1.08
TMEM216-204ENST00000541473 ABCA10Q8WWZ4 1543 aa21.78■■□□□ 1.08
TMEM216-204ENST00000541473 WRNQ14191 1432 aaPredicted RBP eCLIP21.78■■□□□ 1.08
TMEM216-204ENST00000541473 SYNJ2O15056 1496 aa21.75■■□□□ 1.07
TMEM216-204ENST00000541473 CYB5RLQ6IPT4 315 aa21.68■■□□□ 1.06
TMEM216-204ENST00000541473 CLASP1Q7Z460 1538 aa21.68■■□□□ 1.06
TMEM216-204ENST00000541473 ADAMTS12P58397 1594 aa21.63■■□□□ 1.05
TMEM216-204ENST00000541473 ARAP1Q96P48 1450 aa21.62■■□□□ 1.05
TMEM216-204ENST00000541473 GRIN2AQ12879 1464 aa21.57■■□□□ 1.04
TMEM216-204ENST00000541473 ERICH3Q5RHP9 1530 aa21.55■■□□□ 1.04
TMEM216-204ENST00000541473 FHAD1B1AJZ9 1412 aa21.52■■□□□ 1.04
TMEM216-204ENST00000541473 CEP170Q5SW79 1584 aa21.48■■□□□ 1.03
TMEM216-204ENST00000541473 TRHP20396 242 aaPredicted RBP21.48■■□□□ 1.03
TMEM216-204ENST00000541473 NUP160Q12769 1436 aa21.42■■□□□ 1.02
TMEM216-204ENST00000541473 KIF27Q86VH2 1401 aa21.38■■□□□ 1.01
TMEM216-204ENST00000541473 CUL7Q14999 1698 aa21.38■■□□□ 1.01
TMEM216-204ENST00000541473 SHROOM2Q13796 1616 aa21.37■■□□□ 1.01
TMEM216-204ENST00000541473 ERCC6L2Q5T890 1561 aa21.35■■□□□ 1.01
TMEM216-204ENST00000541473 RUSC2Q8N2Y8 1516 aa21.32■■□□□ 1
TMEM216-204ENST00000541473 PRG4Q92954 1404 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms