RNA–Protein interactions for RNA: ENST00000541444.5

CACNA2D4-213, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-213ENST00000541444 NISCHQ9Y2I1 1504 aa26.3■■□□□ 1.8
CACNA2D4-213ENST00000541444 ABCC9O60706 1549 aa24.28■■□□□ 1.48
CACNA2D4-213ENST00000541444 CCDC180Q9P1Z9 1646 aa23.8■■□□□ 1.4
CACNA2D4-213ENST00000541444 DNAJC5BQ9UF47 199 aa23.22■■□□□ 1.31
CACNA2D4-213ENST00000541444 RB1CC1Q8TDY2 1594 aa22.88■■□□□ 1.25
CACNA2D4-213ENST00000541444 NACADO15069 1562 aa22.6■■□□□ 1.21
CACNA2D4-213ENST00000541444 PABPN1Q86U42 306 aaKnown RBP eCLIP22.54■■□□□ 1.2
CACNA2D4-213ENST00000541444 UNC13AQ9UPW8 1703 aa22.4■■□□□ 1.18
CACNA2D4-213ENST00000541444 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
CACNA2D4-213ENST00000541444 BICRAQ9NZM4 1560 aa22.27■■□□□ 1.16
CACNA2D4-213ENST00000541444 MYO15BQ96JP2 1530 aa22.14■■□□□ 1.13
CACNA2D4-213ENST00000541444 CECR2Q9BXF3 1484 aa21.91■■□□□ 1.1
CACNA2D4-213ENST00000541444 CC2D2AQ9P2K1 1620 aa21.9■■□□□ 1.1
CACNA2D4-213ENST00000541444 SHROOM4Q9ULL8 1493 aa21.87■■□□□ 1.09
CACNA2D4-213ENST00000541444 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
CACNA2D4-213ENST00000541444 ZCCHC6Q5VYS8 1495 aaKnown RBP21.71■■□□□ 1.07
CACNA2D4-213ENST00000541444 DCAF1Q9Y4B6 1507 aa21.69■■□□□ 1.06
CACNA2D4-213ENST00000541444 SCRIBQ14160 1630 aa21.68■■□□□ 1.06
CACNA2D4-213ENST00000541444 DNAJC5Q9H3Z4 198 aa21.64■■□□□ 1.05
CACNA2D4-213ENST00000541444 CUX2O14529 1486 aa21.09■□□□□ 0.97
CACNA2D4-213ENST00000541444 ERCC6Q03468 1493 aa20.97■□□□□ 0.95
CACNA2D4-213ENST00000541444 NCAPD3P42695 1498 aa20.88■□□□□ 0.93
CACNA2D4-213ENST00000541444 ATAD2BQ9ULI0 1458 aa20.76■□□□□ 0.91
CACNA2D4-213ENST00000541444 NESP48681 1621 aa20.74■□□□□ 0.91
CACNA2D4-213ENST00000541444 HMGXB3Q12766 1538 aa20.68■□□□□ 0.9
CACNA2D4-213ENST00000541444 SMARCA2P51531 1590 aa20.66■□□□□ 0.9
CACNA2D4-213ENST00000541444 SMARCA4P51532 1647 aa20.63■□□□□ 0.89
CACNA2D4-213ENST00000541444 THOC2Q8NI27 1593 aaKnown RBP20.6■□□□□ 0.89
CACNA2D4-213ENST00000541444 BAZ1BQ9UIG0 1483 aaKnown RBP20.53■□□□□ 0.88
CACNA2D4-213ENST00000541444 TRIM41Q8WV44 630 aa20.49■□□□□ 0.87
CACNA2D4-213ENST00000541444 LAMC3Q9Y6N6 1575 aa20.48■□□□□ 0.87
CACNA2D4-213ENST00000541444 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
CACNA2D4-213ENST00000541444 BAZ1AQ9NRL2 1556 aaPredicted RBP20.44■□□□□ 0.86
CACNA2D4-213ENST00000541444 PEG3Q9GZU2 1588 aa20.42■□□□□ 0.86
CACNA2D4-213ENST00000541444 PDS5BQ9NTI5 1447 aa20.37■□□□□ 0.85
CACNA2D4-213ENST00000541444 MROH2BQ7Z745 1585 aa20.28■□□□□ 0.84
CACNA2D4-213ENST00000541444 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
CACNA2D4-213ENST00000541444 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
CACNA2D4-213ENST00000541444 WDR62O43379 1518 aa20.21■□□□□ 0.83
CACNA2D4-213ENST00000541444 CEP164Q9UPV0 1460 aa20.06■□□□□ 0.8
CACNA2D4-213ENST00000541444 OSCARQ8IYS5 282 aa20.05■□□□□ 0.8
CACNA2D4-213ENST00000541444 WIZO95785 1651 aa20.01■□□□□ 0.79
CACNA2D4-213ENST00000541444 FANCD2Q9BXW9 1451 aa20■□□□□ 0.79
CACNA2D4-213ENST00000541444 CFTRP13569 1480 aa19.9■□□□□ 0.78
CACNA2D4-213ENST00000541444 URB2Q14146 1524 aaKnown RBP19.88■□□□□ 0.77
CACNA2D4-213ENST00000541444 RIMBP3CA6NJZ7 1639 aa19.87■□□□□ 0.77
CACNA2D4-213ENST00000541444 RIMBP3BA6NNM3 1639 aa19.87■□□□□ 0.77
CACNA2D4-213ENST00000541444 RIMBP3Q9UFD9 1639 aa19.87■□□□□ 0.77
CACNA2D4-213ENST00000541444 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
CACNA2D4-213ENST00000541444 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
CACNA2D4-213ENST00000541444 ZNF608Q9ULD9 1512 aaPredicted RBP19.72■□□□□ 0.75
CACNA2D4-213ENST00000541444 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
CACNA2D4-213ENST00000541444 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
CACNA2D4-213ENST00000541444 IFT140Q96RY7 1462 aa19.67■□□□□ 0.74
CACNA2D4-213ENST00000541444 PRDM2Q13029 1718 aa19.66■□□□□ 0.74
CACNA2D4-213ENST00000541444 CYB5RLQ6IPT4 315 aa19.63■□□□□ 0.73
CACNA2D4-213ENST00000541444 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
CACNA2D4-213ENST00000541444 TOPBP1Q92547 1522 aa19.57■□□□□ 0.72
CACNA2D4-213ENST00000541444 TRHP20396 242 aaPredicted RBP19.55■□□□□ 0.72
CACNA2D4-213ENST00000541444 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
CACNA2D4-213ENST00000541444 CHD1O14646 1710 aa19.53■□□□□ 0.72
CACNA2D4-213ENST00000541444 CCDC88BA6NC98 1476 aa19.5■□□□□ 0.71
CACNA2D4-213ENST00000541444 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.711e-6■■■□□ 18.6
CACNA2D4-213ENST00000541444 ABCC8Q09428 1581 aa19.47■□□□□ 0.71
CACNA2D4-213ENST00000541444 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
CACNA2D4-213ENST00000541444 TARBP1Q13395 1621 aaKnown RBP19.45■□□□□ 0.7
CACNA2D4-213ENST00000541444 FBLN2P98095 1184 aa19.42■□□□□ 0.7
CACNA2D4-213ENST00000541444 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
CACNA2D4-213ENST00000541444 AEBP2Q6ZN18 517 aaPredicted RBP19.31■□□□□ 0.68
CACNA2D4-213ENST00000541444 RAD54L2Q9Y4B4 1467 aa19.29■□□□□ 0.68
CACNA2D4-213ENST00000541444 CLASP1Q7Z460 1538 aa19.29■□□□□ 0.68
CACNA2D4-213ENST00000541444 TDRD9Q8NDG6 1382 aaKnown RBP19.28■□□□□ 0.68
CACNA2D4-213ENST00000541444 SNAPC4Q5SXM2 1469 aa19.26■□□□□ 0.67
CACNA2D4-213ENST00000541444 SOGA1O94964 1423 aa19.24■□□□□ 0.67
CACNA2D4-213ENST00000541444 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
CACNA2D4-213ENST00000541444 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
CACNA2D4-213ENST00000541444 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
CACNA2D4-213ENST00000541444 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
CACNA2D4-213ENST00000541444 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
CACNA2D4-213ENST00000541444 GRIN2BQ13224 1484 aa19.13■□□□□ 0.65
CACNA2D4-213ENST00000541444 SYNJ2O15056 1496 aa19.12■□□□□ 0.65
CACNA2D4-213ENST00000541444 GAPVD1Q14C86 1478 aa19.11■□□□□ 0.65
CACNA2D4-213ENST00000541444 CUX1P39880 1505 aa19.08■□□□□ 0.64
CACNA2D4-213ENST00000541444 PBRM1Q86U86 1689 aa19.03■□□□□ 0.64
CACNA2D4-213ENST00000541444 ERCC6L2Q5T890 1561 aa18.98■□□□□ 0.63
CACNA2D4-213ENST00000541444 ABCA5Q8WWZ7 1642 aa18.93■□□□□ 0.62
CACNA2D4-213ENST00000541444 ABCA10Q8WWZ4 1543 aa18.91■□□□□ 0.62
CACNA2D4-213ENST00000541444 GRIN2AQ12879 1464 aa18.89■□□□□ 0.61
CACNA2D4-213ENST00000541444 CEP170Q5SW79 1584 aa18.88■□□□□ 0.61
CACNA2D4-213ENST00000541444 NUP160Q12769 1436 aa18.85■□□□□ 0.61
CACNA2D4-213ENST00000541444 KIF13AQ9H1H9 1805 aa18.85■□□□□ 0.61
CACNA2D4-213ENST00000541444 SHROOM2Q13796 1616 aa18.82■□□□□ 0.6
CACNA2D4-213ENST00000541444 ADAMTS12P58397 1594 aa18.82■□□□□ 0.6
CACNA2D4-213ENST00000541444 FHAD1B1AJZ9 1412 aa18.74■□□□□ 0.59
CACNA2D4-213ENST00000541444 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
CACNA2D4-213ENST00000541444 CHIC1Q5VXU3 224 aa18.7■□□□□ 0.58
CACNA2D4-213ENST00000541444 PRG4Q92954 1404 aaPredicted RBP18.7■□□□□ 0.58
CACNA2D4-213ENST00000541444 FAM69CQ0P6D2 419 aa18.67■□□□□ 0.58
CACNA2D4-213ENST00000541444 ABCC10Q5T3U5 1492 aa18.66■□□□□ 0.58
CACNA2D4-213ENST00000541444 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms