RNA–Protein interactions for RNA: ENST00000541371.5

PRPF19-206, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 3

Gene PRPF19, Length 943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-206ENST00000541371 NISCHQ9Y2I1 1504 aa33.01■■■□□ 2.87
PRPF19-206ENST00000541371 ABCC9O60706 1549 aa29.66■■■□□ 2.34
PRPF19-206ENST00000541371 CCDC180Q9P1Z9 1646 aa29.57■■■□□ 2.32
PRPF19-206ENST00000541371 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.11
PRPF19-206ENST00000541371 NACADO15069 1562 aa28.02■■■□□ 2.08
PRPF19-206ENST00000541371 DCAF8L2P0C7V8 631 aa28■■■□□ 2.07
PRPF19-206ENST00000541371 DNAJC5BQ9UF47 199 aa27.84■■■□□ 2.05
PRPF19-206ENST00000541371 PABPN1Q86U42 306 aaKnown RBP eCLIP27.66■■■□□ 2.02
PRPF19-206ENST00000541371 MYO15BQ96JP2 1530 aa27.6■■■□□ 2.01
PRPF19-206ENST00000541371 UNC13AQ9UPW8 1703 aa27.48■■□□□ 1.99
PRPF19-206ENST00000541371 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
PRPF19-206ENST00000541371 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
PRPF19-206ENST00000541371 DCAF1Q9Y4B6 1507 aa27.25■■□□□ 1.95
PRPF19-206ENST00000541371 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
PRPF19-206ENST00000541371 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
PRPF19-206ENST00000541371 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
PRPF19-206ENST00000541371 CECR2Q9BXF3 1484 aa26.73■■□□□ 1.87
PRPF19-206ENST00000541371 EIF4G1Q04637 1599 aaKnown RBP26.7■■□□□ 1.86
PRPF19-206ENST00000541371 DNAJC5Q9H3Z4 198 aa26.02■■□□□ 1.76
PRPF19-206ENST00000541371 NCAPD3P42695 1498 aa25.87■■□□□ 1.73
PRPF19-206ENST00000541371 ATAD2BQ9ULI0 1458 aa25.79■■□□□ 1.72
PRPF19-206ENST00000541371 SMARCA4P51532 1647 aa25.73■■□□□ 1.71
PRPF19-206ENST00000541371 SMARCA2P51531 1590 aa25.71■■□□□ 1.71
PRPF19-206ENST00000541371 HMGXB3Q12766 1538 aa25.65■■□□□ 1.7
PRPF19-206ENST00000541371 ERCC6Q03468 1493 aa25.64■■□□□ 1.69
PRPF19-206ENST00000541371 BAZ1AQ9NRL2 1556 aaPredicted RBP25.63■■□□□ 1.69
PRPF19-206ENST00000541371 CUX2O14529 1486 aa25.55■■□□□ 1.68
PRPF19-206ENST00000541371 BAZ1BQ9UIG0 1483 aaKnown RBP25.55■■□□□ 1.68
PRPF19-206ENST00000541371 PEG3Q9GZU2 1588 aa25.47■■□□□ 1.67
PRPF19-206ENST00000541371 NESP48681 1621 aa25.45■■□□□ 1.67
PRPF19-206ENST00000541371 MROH2BQ7Z745 1585 aa25.43■■□□□ 1.66
PRPF19-206ENST00000541371 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
PRPF19-206ENST00000541371 PDS5BQ9NTI5 1447 aa25.18■■□□□ 1.62
PRPF19-206ENST00000541371 THOC2Q8NI27 1593 aaKnown RBP25.15■■□□□ 1.62
PRPF19-206ENST00000541371 WIZO95785 1651 aa25.11■■□□□ 1.61
PRPF19-206ENST00000541371 CADPSQ9ULU8 1353 aa25.11■■□□□ 1.61
PRPF19-206ENST00000541371 KIF21AQ7Z4S6 1674 aa25.08■■□□□ 1.61
PRPF19-206ENST00000541371 MRC2Q9UBG0 1479 aa24.93■■□□□ 1.58
PRPF19-206ENST00000541371 RSF1Q96T23 1441 aaPredicted RBP24.92■■□□□ 1.58
PRPF19-206ENST00000541371 WDR62O43379 1518 aa24.84■■□□□ 1.57
PRPF19-206ENST00000541371 CEP164Q9UPV0 1460 aa24.83■■□□□ 1.57
PRPF19-206ENST00000541371 FANCD2Q9BXW9 1451 aa24.81■■□□□ 1.56
PRPF19-206ENST00000541371 TOP2AP11388 1531 aaKnown RBP24.81■■□□□ 1.56
PRPF19-206ENST00000541371 CFTRP13569 1480 aa24.8■■□□□ 1.56
PRPF19-206ENST00000541371 URB2Q14146 1524 aaKnown RBP24.58■■□□□ 1.53
PRPF19-206ENST00000541371 CCDC88BA6NC98 1476 aa24.55■■□□□ 1.52
PRPF19-206ENST00000541371 TRIM41Q8WV44 630 aa24.51■■□□□ 1.51
PRPF19-206ENST00000541371 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
PRPF19-206ENST00000541371 OSCARQ8IYS5 282 aa24.46■■□□□ 1.51
PRPF19-206ENST00000541371 IFT140Q96RY7 1462 aa24.34■■□□□ 1.49
PRPF19-206ENST00000541371 TOPBP1Q92547 1522 aa24.33■■□□□ 1.49
PRPF19-206ENST00000541371 ABCC8Q09428 1581 aa24.3■■□□□ 1.48
PRPF19-206ENST00000541371 ZNF608Q9ULD9 1512 aaPredicted RBP24.29■■□□□ 1.48
PRPF19-206ENST00000541371 DNMBPQ6XZF7 1577 aa24.22■■□□□ 1.47
PRPF19-206ENST00000541371 EIF4G3O43432 1585 aaKnown RBP24.12■■□□□ 1.45
PRPF19-206ENST00000541371 AQRO60306 1485 aaKnown RBP eCLIP24.1■■□□□ 1.459e-7■■■■□ 20.2
PRPF19-206ENST00000541371 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
PRPF19-206ENST00000541371 TARBP1Q13395 1621 aaKnown RBP24.07■■□□□ 1.44
PRPF19-206ENST00000541371 RIMBP3CA6NJZ7 1639 aa24.04■■□□□ 1.44
PRPF19-206ENST00000541371 RIMBP3BA6NNM3 1639 aa24.04■■□□□ 1.44
PRPF19-206ENST00000541371 RIMBP3Q9UFD9 1639 aa24.04■■□□□ 1.44
PRPF19-206ENST00000541371 FBLN2P98095 1184 aa24.01■■□□□ 1.43
PRPF19-206ENST00000541371 SOGA1O94964 1423 aa24.01■■□□□ 1.43
PRPF19-206ENST00000541371 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
PRPF19-206ENST00000541371 ARHGEF11O15085 1522 aa23.99■■□□□ 1.43
PRPF19-206ENST00000541371 TDRD9Q8NDG6 1382 aaKnown RBP23.97■■□□□ 1.43
PRPF19-206ENST00000541371 FGD5Q6ZNL6 1462 aa23.93■■□□□ 1.42
PRPF19-206ENST00000541371 CHD1O14646 1710 aa23.93■■□□□ 1.42
PRPF19-206ENST00000541371 SUPT5HO00267 1087 aaKnown RBP23.9■■□□□ 1.42
PRPF19-206ENST00000541371 CYB5RLQ6IPT4 315 aa23.9■■□□□ 1.42
PRPF19-206ENST00000541371 CUX1P39880 1505 aa23.89■■□□□ 1.41
PRPF19-206ENST00000541371 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
PRPF19-206ENST00000541371 SNAPC4Q5SXM2 1469 aa23.83■■□□□ 1.41
PRPF19-206ENST00000541371 CHMP7Q8WUX9 453 aaPredicted RBP23.83■■□□□ 1.41
PRPF19-206ENST00000541371 GRIN2BQ13224 1484 aa23.78■■□□□ 1.4
PRPF19-206ENST00000541371 MAGI1Q96QZ7 1491 aaPredicted RBP23.77■■□□□ 1.4
PRPF19-206ENST00000541371 ARAP1Q96P48 1450 aa23.75■■□□□ 1.39
PRPF19-206ENST00000541371 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
PRPF19-206ENST00000541371 SYNJ2O15056 1496 aa23.69■■□□□ 1.38
PRPF19-206ENST00000541371 GAPVD1Q14C86 1478 aa23.69■■□□□ 1.38
PRPF19-206ENST00000541371 CLASP1Q7Z460 1538 aa23.67■■□□□ 1.38
PRPF19-206ENST00000541371 TRHP20396 242 aaPredicted RBP23.66■■□□□ 1.38
PRPF19-206ENST00000541371 ABCA10Q8WWZ4 1543 aa23.65■■□□□ 1.38
PRPF19-206ENST00000541371 PBRM1Q86U86 1689 aa23.61■■□□□ 1.37
PRPF19-206ENST00000541371 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
PRPF19-206ENST00000541371 ABCA5Q8WWZ7 1642 aa23.58■■□□□ 1.36
PRPF19-206ENST00000541371 TOP2BQ02880 1626 aa23.5■■□□□ 1.35
PRPF19-206ENST00000541371 BIVM-ERCC5R4GMW8 1640 aa23.47■■□□□ 1.35
PRPF19-206ENST00000541371 GRIN2AQ12879 1464 aa23.46■■□□□ 1.35
PRPF19-206ENST00000541371 ADAMTS12P58397 1594 aa23.41■■□□□ 1.34
PRPF19-206ENST00000541371 FHAD1B1AJZ9 1412 aa23.4■■□□□ 1.34
PRPF19-206ENST00000541371 NUP160Q12769 1436 aa23.38■■□□□ 1.33
PRPF19-206ENST00000541371 ERICH3Q5RHP9 1530 aa23.35■■□□□ 1.33
PRPF19-206ENST00000541371 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
PRPF19-206ENST00000541371 ERCC6L2Q5T890 1561 aa23.31■■□□□ 1.32
PRPF19-206ENST00000541371 SHROOM2Q13796 1616 aa23.23■■□□□ 1.31
PRPF19-206ENST00000541371 AEBP2Q6ZN18 517 aaPredicted RBP23.23■■□□□ 1.31
PRPF19-206ENST00000541371 JPH4Q96JJ6 628 aa23.21■■□□□ 1.31
PRPF19-206ENST00000541371 PRG4Q92954 1404 aaPredicted RBP23.19■■□□□ 1.3
PRPF19-206ENST00000541371 KIF27Q86VH2 1401 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms