RNA–Protein interactions for RNA: ENST00000541359.1

LINC00943-207, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 676 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-207ENST00000541359 NISCHQ9Y2I1 1504 aa52.18■■■■■ 5.94
LINC00943-207ENST00000541359 CCDC180Q9P1Z9 1646 aa46.34■■■■■ 5.01
LINC00943-207ENST00000541359 ABCC9O60706 1549 aa45.14■■■■■ 4.82
LINC00943-207ENST00000541359 ZCCHC6Q5VYS8 1495 aaKnown RBP43.52■■■■■ 4.56
LINC00943-207ENST00000541359 NACADO15069 1562 aa43.5■■■■■ 4.55
LINC00943-207ENST00000541359 RB1CC1Q8TDY2 1594 aa43.49■■■■■ 4.55
LINC00943-207ENST00000541359 MYO15BQ96JP2 1530 aa43.32■■■■■ 4.52
LINC00943-207ENST00000541359 DCAF8L2P0C7V8 631 aa43.31■■■■■ 4.52
LINC00943-207ENST00000541359 DCAF1Q9Y4B6 1507 aa43.2■■■■■ 4.51
LINC00943-207ENST00000541359 UNC13AQ9UPW8 1703 aa42.61■■■■■ 4.41
LINC00943-207ENST00000541359 BICRAQ9NZM4 1560 aa42.28■■■■■ 4.36
LINC00943-207ENST00000541359 SCRIBQ14160 1630 aa42.27■■■■■ 4.36
LINC00943-207ENST00000541359 PABPN1Q86U42 306 aaKnown RBP eCLIP42.17■■■■■ 4.34
LINC00943-207ENST00000541359 SHROOM4Q9ULL8 1493 aa41.77■■■■■ 4.28
LINC00943-207ENST00000541359 DNAJC5BQ9UF47 199 aa41.35■■■■■ 4.21
LINC00943-207ENST00000541359 EIF4G1Q04637 1599 aaKnown RBP41.08■■■■■ 4.17
LINC00943-207ENST00000541359 CC2D2AQ9P2K1 1620 aa40.88■■■■■ 4.13
LINC00943-207ENST00000541359 CECR2Q9BXF3 1484 aa40.65■■■■■ 4.1
LINC00943-207ENST00000541359 SMARCA4P51532 1647 aa40.46■■■■■ 4.07
LINC00943-207ENST00000541359 BAZ1AQ9NRL2 1556 aaPredicted RBP40.4■■■■■ 4.06
LINC00943-207ENST00000541359 MROH2BQ7Z745 1585 aa40.23■■■■■ 4.03
LINC00943-207ENST00000541359 ATAD2BQ9ULI0 1458 aa40.19■■■■■ 4.03
LINC00943-207ENST00000541359 NCAPD3P42695 1498 aa40.14■■■■■ 4.02
LINC00943-207ENST00000541359 SMARCA2P51531 1590 aa40.11■■■■■ 4.01
LINC00943-207ENST00000541359 PEG3Q9GZU2 1588 aa40.1■■■■■ 4.01
LINC00943-207ENST00000541359 HMGXB3Q12766 1538 aa39.98■■■■□ 3.99
LINC00943-207ENST00000541359 BAZ1BQ9UIG0 1483 aaKnown RBP39.82■■■■□ 3.97
LINC00943-207ENST00000541359 RSF1Q96T23 1441 aaPredicted RBP39.81■■■■□ 3.96
LINC00943-207ENST00000541359 WIZO95785 1651 aa39.8■■■■□ 3.96
LINC00943-207ENST00000541359 TOP2AP11388 1531 aaKnown RBP39.38■■■■□ 3.89
LINC00943-207ENST00000541359 NESP48681 1621 aa39.15■■■■□ 3.86
LINC00943-207ENST00000541359 LAMC3Q9Y6N6 1575 aa39.04■■■■□ 3.84
LINC00943-207ENST00000541359 CADPSQ9ULU8 1353 aa38.95■■■■□ 3.83
LINC00943-207ENST00000541359 CCDC88BA6NC98 1476 aa38.9■■■■□ 3.82
LINC00943-207ENST00000541359 ERCC6Q03468 1493 aa38.83■■■■□ 3.81
LINC00943-207ENST00000541359 CFTRP13569 1480 aa38.79■■■■□ 3.8
LINC00943-207ENST00000541359 SUPT5HO00267 1087 aaKnown RBP38.75■■■■□ 3.79
LINC00943-207ENST00000541359 PDS5BQ9NTI5 1447 aa38.72■■■■□ 3.79
LINC00943-207ENST00000541359 KIF21AQ7Z4S6 1674 aa38.71■■■■□ 3.79
LINC00943-207ENST00000541359 THOC2Q8NI27 1593 aaKnown RBP38.57■■■■□ 3.77
LINC00943-207ENST00000541359 PRDM2Q13029 1718 aa38.54■■■■□ 3.76
LINC00943-207ENST00000541359 FANCD2Q9BXW9 1451 aa38.51■■■■□ 3.76
LINC00943-207ENST00000541359 CUX2O14529 1486 aa38.43■■■■□ 3.74
LINC00943-207ENST00000541359 CEP164Q9UPV0 1460 aa38.43■■■■□ 3.74
LINC00943-207ENST00000541359 MRC2Q9UBG0 1479 aa38.36■■■■□ 3.73
LINC00943-207ENST00000541359 WDR62O43379 1518 aa38.28■■■■□ 3.72
LINC00943-207ENST00000541359 URB2Q14146 1524 aaKnown RBP38.17■■■■□ 3.7
LINC00943-207ENST00000541359 TOPBP1Q92547 1522 aa37.94■■■■□ 3.66
LINC00943-207ENST00000541359 DNMBPQ6XZF7 1577 aa37.9■■■■□ 3.66
LINC00943-207ENST00000541359 ABCC8Q09428 1581 aa37.87■■■■□ 3.65
LINC00943-207ENST00000541359 CUX1P39880 1505 aa37.74■■■■□ 3.63
LINC00943-207ENST00000541359 POLA1P09884 1462 aaPredicted RBP37.63■■■■□ 3.61
LINC00943-207ENST00000541359 IFT140Q96RY7 1462 aa37.63■■■■□ 3.61
LINC00943-207ENST00000541359 TARBP1Q13395 1621 aaKnown RBP37.55■■■■□ 3.6
LINC00943-207ENST00000541359 FGD5Q6ZNL6 1462 aa37.55■■■■□ 3.6
LINC00943-207ENST00000541359 ZNF608Q9ULD9 1512 aaPredicted RBP37.5■■■■□ 3.59
LINC00943-207ENST00000541359 WRNQ14191 1432 aaPredicted RBP eCLIP37.47■■■■□ 3.59
LINC00943-207ENST00000541359 SYNJ1O43426 1573 aa37.46■■■■□ 3.59
LINC00943-207ENST00000541359 RAD54L2Q9Y4B4 1467 aa37.45■■■■□ 3.59
LINC00943-207ENST00000541359 BIVM-ERCC5R4GMW8 1640 aa37.45■■■■□ 3.59
LINC00943-207ENST00000541359 TOP2BQ02880 1626 aa37.43■■■■□ 3.58
LINC00943-207ENST00000541359 SOGA1O94964 1423 aa37.41■■■■□ 3.58
LINC00943-207ENST00000541359 EIF4G3O43432 1585 aaKnown RBP37.36■■■■□ 3.57
LINC00943-207ENST00000541359 WDR97A6NE52 1622 aa37.32■■■■□ 3.56
LINC00943-207ENST00000541359 AQRO60306 1485 aaKnown RBP eCLIP37.26■■■■□ 3.55
LINC00943-207ENST00000541359 ABCA10Q8WWZ4 1543 aa37.2■■■■□ 3.55
LINC00943-207ENST00000541359 TDRD9Q8NDG6 1382 aaKnown RBP37.19■■■■□ 3.54
LINC00943-207ENST00000541359 ABCA5Q8WWZ7 1642 aa37.08■■■■□ 3.53
LINC00943-207ENST00000541359 DNAJC5Q9H3Z4 198 aa37.05■■■■□ 3.52
LINC00943-207ENST00000541359 GAPVD1Q14C86 1478 aa37.01■■■■□ 3.51
LINC00943-207ENST00000541359 GRIN2BQ13224 1484 aa36.98■■■■□ 3.51
LINC00943-207ENST00000541359 PBRM1Q86U86 1689 aa36.97■■■■□ 3.51
LINC00943-207ENST00000541359 SNAPC4Q5SXM2 1469 aa36.94■■■■□ 3.5
LINC00943-207ENST00000541359 MAGI1Q96QZ7 1491 aaPredicted RBP36.88■■■■□ 3.49
LINC00943-207ENST00000541359 CHD1O14646 1710 aa36.86■■■■□ 3.49
LINC00943-207ENST00000541359 OSCARQ8IYS5 282 aa36.77■■■■□ 3.48
LINC00943-207ENST00000541359 ERICH3Q5RHP9 1530 aa36.75■■■■□ 3.47
LINC00943-207ENST00000541359 SYNJ2O15056 1496 aa36.73■■■■□ 3.47
LINC00943-207ENST00000541359 ADAMTS12P58397 1594 aa36.7■■■■□ 3.47
LINC00943-207ENST00000541359 KIF27Q86VH2 1401 aa36.65■■■■□ 3.46
LINC00943-207ENST00000541359 FBLN2P98095 1184 aa36.64■■■■□ 3.46
LINC00943-207ENST00000541359 CHMP7Q8WUX9 453 aaPredicted RBP36.59■■■■□ 3.45
LINC00943-207ENST00000541359 TRIM41Q8WV44 630 aa36.58■■■■□ 3.45
LINC00943-207ENST00000541359 FHAD1B1AJZ9 1412 aa36.58■■■■□ 3.45
LINC00943-207ENST00000541359 IGF1RP08069 1367 aa36.53■■■■□ 3.44
LINC00943-207ENST00000541359 GRIN2AQ12879 1464 aa36.53■■■■□ 3.44
LINC00943-207ENST00000541359 CLASP1Q7Z460 1538 aa36.49■■■■□ 3.43
LINC00943-207ENST00000541359 RUSC2Q8N2Y8 1516 aa36.46■■■■□ 3.43
LINC00943-207ENST00000541359 CUL7Q14999 1698 aa36.44■■■■□ 3.42
LINC00943-207ENST00000541359 NUP160Q12769 1436 aa36.39■■■■□ 3.42
LINC00943-207ENST00000541359 CEP170Q5SW79 1584 aa36.39■■■■□ 3.42
LINC00943-207ENST00000541359 CHIC1Q5VXU3 224 aa36.33■■■■□ 3.41
LINC00943-207ENST00000541359 RIMBP3CA6NJZ7 1639 aa36.3■■■■□ 3.4
LINC00943-207ENST00000541359 RIMBP3BA6NNM3 1639 aa36.3■■■■□ 3.4
LINC00943-207ENST00000541359 RIMBP3Q9UFD9 1639 aa36.3■■■■□ 3.4
LINC00943-207ENST00000541359 ARHGEF11O15085 1522 aa36.29■■■■□ 3.4
LINC00943-207ENST00000541359 CARMIL1Q5VZK9 1371 aa36.27■■■■□ 3.4
LINC00943-207ENST00000541359 SHROOM2Q13796 1616 aa36.13■■■■□ 3.37
LINC00943-207ENST00000541359 RAPGEF2Q9Y4G8 1499 aa36.1■■■■□ 3.37
LINC00943-207ENST00000541359 PRXQ9BXM0 1461 aa36.06■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms