RNA–Protein interactions for RNA: ENST00000541349.5

KCNK4-209, Transcript of potassium two pore domain channel subfamily K member 4, humanhuman

TSL 1 (best)

Gene KCNK4, Length 1,450 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNK4-209ENST00000541349 NISCHQ9Y2I1 1504 aa41.63■■■■■ 4.26
KCNK4-209ENST00000541349 CCDC180Q9P1Z9 1646 aa36.83■■■■□ 3.49
KCNK4-209ENST00000541349 ABCC9O60706 1549 aa36.46■■■■□ 3.43
KCNK4-209ENST00000541349 ZCCHC6Q5VYS8 1495 aaKnown RBP34.8■■■■□ 3.16
KCNK4-209ENST00000541349 RB1CC1Q8TDY2 1594 aa34.7■■■■□ 3.15
KCNK4-209ENST00000541349 NACADO15069 1562 aa34.54■■■■□ 3.12
KCNK4-209ENST00000541349 DCAF8L2P0C7V8 631 aa34.52■■■■□ 3.12
KCNK4-209ENST00000541349 MYO15BQ96JP2 1530 aa34.5■■■■□ 3.11
KCNK4-209ENST00000541349 DCAF1Q9Y4B6 1507 aa34.49■■■■□ 3.11
KCNK4-209ENST00000541349 DNAJC5BQ9UF47 199 aa34.32■■■■□ 3.08
KCNK4-209ENST00000541349 UNC13AQ9UPW8 1703 aa33.91■■■■□ 3.02
KCNK4-209ENST00000541349 PABPN1Q86U42 306 aaKnown RBP eCLIP33.88■■■■□ 3.01
KCNK4-209ENST00000541349 BICRAQ9NZM4 1560 aa33.67■■■□□ 2.98
KCNK4-209ENST00000541349 SCRIBQ14160 1630 aa33.63■■■□□ 2.97
KCNK4-209ENST00000541349 SHROOM4Q9ULL8 1493 aa33.27■■■□□ 2.92
KCNK4-209ENST00000541349 CC2D2AQ9P2K1 1620 aa32.96■■■□□ 2.87
KCNK4-209ENST00000541349 CECR2Q9BXF3 1484 aa32.88■■■□□ 2.85
KCNK4-209ENST00000541349 EIF4G1Q04637 1599 aaKnown RBP32.86■■■□□ 2.85
KCNK4-209ENST00000541349 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
KCNK4-209ENST00000541349 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
KCNK4-209ENST00000541349 MROH2BQ7Z745 1585 aa32.09■■■□□ 2.73
KCNK4-209ENST00000541349 ATAD2BQ9ULI0 1458 aa31.96■■■□□ 2.71
KCNK4-209ENST00000541349 PEG3Q9GZU2 1588 aa31.93■■■□□ 2.7
KCNK4-209ENST00000541349 SMARCA2P51531 1590 aa31.92■■■□□ 2.7
KCNK4-209ENST00000541349 NCAPD3P42695 1498 aa31.88■■■□□ 2.69
KCNK4-209ENST00000541349 RSF1Q96T23 1441 aaPredicted RBP31.86■■■□□ 2.69
KCNK4-209ENST00000541349 HMGXB3Q12766 1538 aa31.78■■■□□ 2.68
KCNK4-209ENST00000541349 WIZO95785 1651 aa31.73■■■□□ 2.67
KCNK4-209ENST00000541349 BAZ1BQ9UIG0 1483 aaKnown RBP31.7■■■□□ 2.66
KCNK4-209ENST00000541349 DNAJC5Q9H3Z4 198 aa31.69■■■□□ 2.66
KCNK4-209ENST00000541349 CUX2O14529 1486 aa31.56■■■□□ 2.64
KCNK4-209ENST00000541349 ERCC6Q03468 1493 aa31.52■■■□□ 2.64
KCNK4-209ENST00000541349 TOP2AP11388 1531 aaKnown RBP31.46■■■□□ 2.63
KCNK4-209ENST00000541349 NESP48681 1621 aa31.27■■■□□ 2.6
KCNK4-209ENST00000541349 SUPT5HO00267 1087 aaKnown RBP31.27■■■□□ 2.6
KCNK4-209ENST00000541349 LAMC3Q9Y6N6 1575 aa31.1■■■□□ 2.57
KCNK4-209ENST00000541349 CCDC88BA6NC98 1476 aa31.07■■■□□ 2.56
KCNK4-209ENST00000541349 THOC2Q8NI27 1593 aaKnown RBP31.04■■■□□ 2.56
KCNK4-209ENST00000541349 CADPSQ9ULU8 1353 aa30.96■■■□□ 2.55
KCNK4-209ENST00000541349 KIF21AQ7Z4S6 1674 aa30.91■■■□□ 2.54
KCNK4-209ENST00000541349 PDS5BQ9NTI5 1447 aa30.9■■■□□ 2.54
KCNK4-209ENST00000541349 CFTRP13569 1480 aa30.88■■■□□ 2.53
KCNK4-209ENST00000541349 MRC2Q9UBG0 1479 aa30.64■■■□□ 2.5
KCNK4-209ENST00000541349 PRDM2Q13029 1718 aa30.62■■■□□ 2.49
KCNK4-209ENST00000541349 FANCD2Q9BXW9 1451 aa30.61■■■□□ 2.49
KCNK4-209ENST00000541349 WDR62O43379 1518 aa30.58■■■□□ 2.49
KCNK4-209ENST00000541349 CEP164Q9UPV0 1460 aa30.53■■■□□ 2.48
KCNK4-209ENST00000541349 URB2Q14146 1524 aaKnown RBP30.28■■■□□ 2.44
KCNK4-209ENST00000541349 TRIM41Q8WV44 630 aa30.19■■■□□ 2.42
KCNK4-209ENST00000541349 ABCC8Q09428 1581 aa30.17■■■□□ 2.42
KCNK4-209ENST00000541349 DNMBPQ6XZF7 1577 aa30.16■■■□□ 2.42
KCNK4-209ENST00000541349 TOPBP1Q92547 1522 aa30.16■■■□□ 2.42
KCNK4-209ENST00000541349 CUX1P39880 1505 aa30.09■■■□□ 2.41
KCNK4-209ENST00000541349 OSCARQ8IYS5 282 aa30.05■■■□□ 2.4
KCNK4-209ENST00000541349 WRNQ14191 1432 aaPredicted RBP eCLIP30.02■■■□□ 2.4
KCNK4-209ENST00000541349 POLA1P09884 1462 aaPredicted RBP29.94■■■□□ 2.38
KCNK4-209ENST00000541349 SYNJ1O43426 1573 aa29.94■■■□□ 2.38
KCNK4-209ENST00000541349 TOP2BQ02880 1626 aa29.92■■■□□ 2.38
KCNK4-209ENST00000541349 BIVM-ERCC5R4GMW8 1640 aa29.92■■■□□ 2.38
KCNK4-209ENST00000541349 FGD5Q6ZNL6 1462 aa29.91■■■□□ 2.38
KCNK4-209ENST00000541349 IFT140Q96RY7 1462 aa29.89■■■□□ 2.38
KCNK4-209ENST00000541349 ZNF608Q9ULD9 1512 aaPredicted RBP29.81■■■□□ 2.36
KCNK4-209ENST00000541349 TARBP1Q13395 1621 aaKnown RBP29.8■■■□□ 2.36
KCNK4-209ENST00000541349 SOGA1O94964 1423 aa29.79■■■□□ 2.36
KCNK4-209ENST00000541349 RAD54L2Q9Y4B4 1467 aa29.78■■■□□ 2.36
KCNK4-209ENST00000541349 RIMBP3CA6NJZ7 1639 aa29.69■■■□□ 2.34
KCNK4-209ENST00000541349 RIMBP3BA6NNM3 1639 aa29.69■■■□□ 2.34
KCNK4-209ENST00000541349 RIMBP3Q9UFD9 1639 aa29.69■■■□□ 2.34
KCNK4-209ENST00000541349 EIF4G3O43432 1585 aaKnown RBP29.68■■■□□ 2.34
KCNK4-209ENST00000541349 ABCA10Q8WWZ4 1543 aa29.66■■■□□ 2.34
KCNK4-209ENST00000541349 WDR97A6NE52 1622 aa29.66■■■□□ 2.34
KCNK4-209ENST00000541349 TDRD9Q8NDG6 1382 aaKnown RBP29.58■■■□□ 2.33
KCNK4-209ENST00000541349 AQRO60306 1485 aaKnown RBP eCLIP29.57■■■□□ 2.32
KCNK4-209ENST00000541349 ARHGEF11O15085 1522 aa29.57■■■□□ 2.32
KCNK4-209ENST00000541349 ABCA5Q8WWZ7 1642 aa29.51■■■□□ 2.31
KCNK4-209ENST00000541349 CHD1O14646 1710 aa29.5■■■□□ 2.31
KCNK4-209ENST00000541349 GAPVD1Q14C86 1478 aa29.47■■■□□ 2.31
KCNK4-209ENST00000541349 CHIC1Q5VXU3 224 aa29.44■■■□□ 2.3
KCNK4-209ENST00000541349 GRIN2BQ13224 1484 aa29.42■■■□□ 2.3
KCNK4-209ENST00000541349 PBRM1Q86U86 1689 aa29.37■■■□□ 2.29
KCNK4-209ENST00000541349 KIF27Q86VH2 1401 aa29.36■■■□□ 2.29
KCNK4-209ENST00000541349 FBLN2P98095 1184 aa29.34■■■□□ 2.29
KCNK4-209ENST00000541349 SNAPC4Q5SXM2 1469 aa29.34■■■□□ 2.29
KCNK4-209ENST00000541349 CYB5RLQ6IPT4 315 aa29.32■■■□□ 2.28
KCNK4-209ENST00000541349 ERICH3Q5RHP9 1530 aa29.31■■■□□ 2.28
KCNK4-209ENST00000541349 MAGI1Q96QZ7 1491 aaPredicted RBP29.31■■■□□ 2.28
KCNK4-209ENST00000541349 ARAP1Q96P48 1450 aa29.27■■■□□ 2.28
KCNK4-209ENST00000541349 RUSC2Q8N2Y8 1516 aa29.2■■■□□ 2.27
KCNK4-209ENST00000541349 ADAMTS12P58397 1594 aa29.2■■■□□ 2.27
KCNK4-209ENST00000541349 IGF1RP08069 1367 aa29.19■■■□□ 2.26
KCNK4-209ENST00000541349 SYNJ2O15056 1496 aa29.19■■■□□ 2.26
KCNK4-209ENST00000541349 CLASP1Q7Z460 1538 aa29.15■■■□□ 2.26
KCNK4-209ENST00000541349 FHAD1B1AJZ9 1412 aa29.15■■■□□ 2.26
KCNK4-209ENST00000541349 CHMP7Q8WUX9 453 aaPredicted RBP29.12■■■□□ 2.25
KCNK4-209ENST00000541349 CUL7Q14999 1698 aa29.1■■■□□ 2.25
KCNK4-209ENST00000541349 EEA1Q15075 1411 aa29.07■■■□□ 2.24
KCNK4-209ENST00000541349 TRHP20396 242 aaPredicted RBP29.05■■■□□ 2.24
KCNK4-209ENST00000541349 GRIN2AQ12879 1464 aa29.05■■■□□ 2.24
KCNK4-209ENST00000541349 CARMIL1Q5VZK9 1371 aa29.02■■■□□ 2.24
KCNK4-209ENST00000541349 CSRNP3Q8WYN3 585 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms