RNA–Protein interactions for RNA: ENST00000541326.5

FERMT3-206, Transcript of fermitin family member 3, humanhuman

TSL 3

Gene FERMT3, Length 890 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-206ENST00000541326 NISCHQ9Y2I1 1504 aa48.88■■■■■ 5.41
FERMT3-206ENST00000541326 ABCC9O60706 1549 aa43.58■■■■■ 4.57
FERMT3-206ENST00000541326 CCDC180Q9P1Z9 1646 aa43.56■■■■■ 4.56
FERMT3-206ENST00000541326 DCAF8L2P0C7V8 631 aa41.53■■■■■ 4.24
FERMT3-206ENST00000541326 RB1CC1Q8TDY2 1594 aa41.49■■■■■ 4.23
FERMT3-206ENST00000541326 NACADO15069 1562 aa41.26■■■■■ 4.2
FERMT3-206ENST00000541326 PABPN1Q86U42 306 aaKnown RBP eCLIP40.76■■■■■ 4.12
FERMT3-206ENST00000541326 MYO15BQ96JP2 1530 aa40.73■■■■■ 4.11
FERMT3-206ENST00000541326 DNAJC5BQ9UF47 199 aa40.7■■■■■ 4.11
FERMT3-206ENST00000541326 ZCCHC6Q5VYS8 1495 aaKnown RBP40.51■■■■■ 4.08
FERMT3-206ENST00000541326 DCAF1Q9Y4B6 1507 aa40.32■■■■■ 4.04
FERMT3-206ENST00000541326 UNC13AQ9UPW8 1703 aa40.31■■■■■ 4.04
FERMT3-206ENST00000541326 BICRAQ9NZM4 1560 aa40.19■■■■■ 4.02
FERMT3-206ENST00000541326 SCRIBQ14160 1630 aa39.87■■■■□ 3.97
FERMT3-206ENST00000541326 SHROOM4Q9ULL8 1493 aa39.69■■■■□ 3.94
FERMT3-206ENST00000541326 CC2D2AQ9P2K1 1620 aa39.25■■■■□ 3.87
FERMT3-206ENST00000541326 EIF4G1Q04637 1599 aaKnown RBP39.25■■■■□ 3.87
FERMT3-206ENST00000541326 CECR2Q9BXF3 1484 aa39.23■■■■□ 3.87
FERMT3-206ENST00000541326 NCAPD3P42695 1498 aa38.15■■■■□ 3.7
FERMT3-206ENST00000541326 ATAD2BQ9ULI0 1458 aa38.08■■■■□ 3.69
FERMT3-206ENST00000541326 SMARCA4P51532 1647 aa38■■■■□ 3.67
FERMT3-206ENST00000541326 SMARCA2P51531 1590 aa37.94■■■■□ 3.66
FERMT3-206ENST00000541326 BAZ1AQ9NRL2 1556 aaPredicted RBP37.91■■■■□ 3.66
FERMT3-206ENST00000541326 HMGXB3Q12766 1538 aa37.79■■■■□ 3.64
FERMT3-206ENST00000541326 BAZ1BQ9UIG0 1483 aaKnown RBP37.74■■■■□ 3.63
FERMT3-206ENST00000541326 MROH2BQ7Z745 1585 aa37.68■■■■□ 3.62
FERMT3-206ENST00000541326 ERCC6Q03468 1493 aa37.65■■■■□ 3.62
FERMT3-206ENST00000541326 PEG3Q9GZU2 1588 aa37.59■■■■□ 3.61
FERMT3-206ENST00000541326 NESP48681 1621 aa37.47■■■■□ 3.59
FERMT3-206ENST00000541326 CUX2O14529 1486 aa37.38■■■■□ 3.57
FERMT3-206ENST00000541326 DNAJC5Q9H3Z4 198 aa37.21■■■■□ 3.55
FERMT3-206ENST00000541326 WIZO95785 1651 aa37.18■■■■□ 3.54
FERMT3-206ENST00000541326 LAMC3Q9Y6N6 1575 aa37.17■■■■□ 3.54
FERMT3-206ENST00000541326 PDS5BQ9NTI5 1447 aa37.1■■■■□ 3.53
FERMT3-206ENST00000541326 CADPSQ9ULU8 1353 aa37.08■■■■□ 3.53
FERMT3-206ENST00000541326 RSF1Q96T23 1441 aaPredicted RBP37.05■■■■□ 3.52
FERMT3-206ENST00000541326 THOC2Q8NI27 1593 aaKnown RBP36.87■■■■□ 3.49
FERMT3-206ENST00000541326 KIF21AQ7Z4S6 1674 aa36.83■■■■□ 3.49
FERMT3-206ENST00000541326 TOP2AP11388 1531 aaKnown RBP36.75■■■■□ 3.47
FERMT3-206ENST00000541326 MRC2Q9UBG0 1479 aa36.69■■■■□ 3.46
FERMT3-206ENST00000541326 CFTRP13569 1480 aa36.63■■■■□ 3.45
FERMT3-206ENST00000541326 FANCD2Q9BXW9 1451 aa36.61■■■■□ 3.45
FERMT3-206ENST00000541326 CEP164Q9UPV0 1460 aa36.61■■■■□ 3.45
FERMT3-206ENST00000541326 WDR62O43379 1518 aa36.5■■■■□ 3.43
FERMT3-206ENST00000541326 CCDC88BA6NC98 1476 aa36.43■■■■□ 3.42
FERMT3-206ENST00000541326 URB2Q14146 1524 aaKnown RBP36.24■■■■□ 3.39
FERMT3-206ENST00000541326 PRDM2Q13029 1718 aa36■■■■□ 3.35
FERMT3-206ENST00000541326 OSCARQ8IYS5 282 aa35.93■■■■□ 3.34
FERMT3-206ENST00000541326 TOPBP1Q92547 1522 aa35.91■■■■□ 3.34
FERMT3-206ENST00000541326 IFT140Q96RY7 1462 aa35.88■■■■□ 3.33
FERMT3-206ENST00000541326 ABCC8Q09428 1581 aa35.88■■■■□ 3.33
FERMT3-206ENST00000541326 SUPT5HO00267 1087 aaKnown RBP35.86■■■■□ 3.33
FERMT3-206ENST00000541326 TRIM41Q8WV44 630 aa35.81■■■■□ 3.32
FERMT3-206ENST00000541326 ZNF608Q9ULD9 1512 aaPredicted RBP35.79■■■■□ 3.32
FERMT3-206ENST00000541326 DNMBPQ6XZF7 1577 aa35.76■■■■□ 3.31
FERMT3-206ENST00000541326 AQRO60306 1485 aaKnown RBP eCLIP35.57■■■■□ 3.289e-7■■■■□ 24.5
FERMT3-206ENST00000541326 POLA1P09884 1462 aaPredicted RBP35.56■■■■□ 3.28
FERMT3-206ENST00000541326 SOGA1O94964 1423 aa35.52■■■■□ 3.28
FERMT3-206ENST00000541326 RAD54L2Q9Y4B4 1467 aa35.49■■■■□ 3.27
FERMT3-206ENST00000541326 EIF4G3O43432 1585 aaKnown RBP35.49■■■■□ 3.27
FERMT3-206ENST00000541326 TARBP1Q13395 1621 aaKnown RBP35.47■■■■□ 3.27
FERMT3-206ENST00000541326 FBLN2P98095 1184 aa35.47■■■■□ 3.27
FERMT3-206ENST00000541326 TDRD9Q8NDG6 1382 aaKnown RBP35.44■■■■□ 3.26
FERMT3-206ENST00000541326 FGD5Q6ZNL6 1462 aa35.39■■■■□ 3.26
FERMT3-206ENST00000541326 CUX1P39880 1505 aa35.37■■■■□ 3.25
FERMT3-206ENST00000541326 CHMP7Q8WUX9 453 aaPredicted RBP35.2■■■■□ 3.23
FERMT3-206ENST00000541326 RIMBP3CA6NJZ7 1639 aa35.17■■■■□ 3.22
FERMT3-206ENST00000541326 RIMBP3BA6NNM3 1639 aa35.17■■■■□ 3.22
FERMT3-206ENST00000541326 RIMBP3Q9UFD9 1639 aa35.17■■■■□ 3.22
FERMT3-206ENST00000541326 SNAPC4Q5SXM2 1469 aa35.16■■■■□ 3.22
FERMT3-206ENST00000541326 ARHGEF11O15085 1522 aa35.15■■■■□ 3.22
FERMT3-206ENST00000541326 CHD1O14646 1710 aa35.12■■■■□ 3.21
FERMT3-206ENST00000541326 GRIN2BQ13224 1484 aa35.11■■■■□ 3.21
FERMT3-206ENST00000541326 CYB5RLQ6IPT4 315 aa35.11■■■■□ 3.21
FERMT3-206ENST00000541326 WDR97A6NE52 1622 aa35.1■■■■□ 3.21
FERMT3-206ENST00000541326 GAPVD1Q14C86 1478 aa35.03■■■■□ 3.2
FERMT3-206ENST00000541326 MAGI1Q96QZ7 1491 aaPredicted RBP35.03■■■■□ 3.2
FERMT3-206ENST00000541326 WRNQ14191 1432 aaPredicted RBP eCLIP35■■■■□ 3.19
FERMT3-206ENST00000541326 ABCA10Q8WWZ4 1543 aa34.98■■■■□ 3.19
FERMT3-206ENST00000541326 SYNJ2O15056 1496 aa34.95■■■■□ 3.19
FERMT3-206ENST00000541326 SYNJ1O43426 1573 aa34.86■■■■□ 3.17
FERMT3-206ENST00000541326 TOP2BQ02880 1626 aa34.83■■■■□ 3.17
FERMT3-206ENST00000541326 ARAP1Q96P48 1450 aa34.82■■■■□ 3.16
FERMT3-206ENST00000541326 ABCA5Q8WWZ7 1642 aa34.8■■■■□ 3.16
FERMT3-206ENST00000541326 PBRM1Q86U86 1689 aa34.79■■■■□ 3.16
FERMT3-206ENST00000541326 CLASP1Q7Z460 1538 aa34.78■■■■□ 3.16
FERMT3-206ENST00000541326 BIVM-ERCC5R4GMW8 1640 aa34.76■■■■□ 3.15
FERMT3-206ENST00000541326 TRHP20396 242 aaPredicted RBP34.69■■■■□ 3.14
FERMT3-206ENST00000541326 GRIN2AQ12879 1464 aa34.63■■■■□ 3.13
FERMT3-206ENST00000541326 FHAD1B1AJZ9 1412 aa34.61■■■■□ 3.13
FERMT3-206ENST00000541326 ADAMTS12P58397 1594 aa34.54■■■■□ 3.12
FERMT3-206ENST00000541326 ERICH3Q5RHP9 1530 aa34.53■■■■□ 3.12
FERMT3-206ENST00000541326 NUP160Q12769 1436 aa34.48■■■■□ 3.11
FERMT3-206ENST00000541326 CEP170Q5SW79 1584 aa34.42■■■■□ 3.1
FERMT3-206ENST00000541326 KIF27Q86VH2 1401 aa34.32■■■■□ 3.08
FERMT3-206ENST00000541326 JPH4Q96JJ6 628 aa34.32■■■■□ 3.08
FERMT3-206ENST00000541326 ERCC6L2Q5T890 1561 aa34.31■■■■□ 3.08
FERMT3-206ENST00000541326 IGF1RP08069 1367 aa34.29■■■■□ 3.08
FERMT3-206ENST00000541326 PRG4Q92954 1404 aaPredicted RBP34.24■■■■□ 3.07
FERMT3-206ENST00000541326 SHROOM2Q13796 1616 aa34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 1254.6 ms