RNA–Protein interactions for RNA: ENST00000541318.1

KDM2B-212, Transcript of lysine demethylase 2B, humanhuman

TSL 4

Gene KDM2B, Length 600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-212ENST00000541318 NISCHQ9Y2I1 1504 aa24.49■■□□□ 1.51
KDM2B-212ENST00000541318 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
KDM2B-212ENST00000541318 ABCC9O60706 1549 aa21.99■■□□□ 1.11
KDM2B-212ENST00000541318 RB1CC1Q8TDY2 1594 aa20.97■□□□□ 0.95
KDM2B-212ENST00000541318 NACADO15069 1562 aa20.84■□□□□ 0.93
KDM2B-212ENST00000541318 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
KDM2B-212ENST00000541318 MYO15BQ96JP2 1530 aa20.58■□□□□ 0.88
KDM2B-212ENST00000541318 DCAF8L2P0C7V8 631 aa20.54■□□□□ 0.88
KDM2B-212ENST00000541318 UNC13AQ9UPW8 1703 aa20.52■□□□□ 0.88
KDM2B-212ENST00000541318 PABPN1Q86U42 306 aaKnown RBP eCLIP20.42■□□□□ 0.86
KDM2B-212ENST00000541318 BICRAQ9NZM4 1560 aa20.37■□□□□ 0.85
KDM2B-212ENST00000541318 ZCCHC6Q5VYS8 1495 aaKnown RBP20.3■□□□□ 0.84
KDM2B-212ENST00000541318 DCAF1Q9Y4B6 1507 aa20.28■□□□□ 0.84
KDM2B-212ENST00000541318 SHROOM4Q9ULL8 1493 aa20.15■□□□□ 0.82
KDM2B-212ENST00000541318 SCRIBQ14160 1630 aa20■□□□□ 0.79
KDM2B-212ENST00000541318 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
KDM2B-212ENST00000541318 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
KDM2B-212ENST00000541318 CECR2Q9BXF3 1484 aa19.84■□□□□ 0.77
KDM2B-212ENST00000541318 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
KDM2B-212ENST00000541318 ATAD2BQ9ULI0 1458 aa19.14■□□□□ 0.65
KDM2B-212ENST00000541318 SMARCA4P51532 1647 aa19.12■□□□□ 0.65
KDM2B-212ENST00000541318 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
KDM2B-212ENST00000541318 HMGXB3Q12766 1538 aa19.1■□□□□ 0.65
KDM2B-212ENST00000541318 CUX2O14529 1486 aa19.04■□□□□ 0.64
KDM2B-212ENST00000541318 DNAJC5Q9H3Z4 198 aa19.04■□□□□ 0.64
KDM2B-212ENST00000541318 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.63
KDM2B-212ENST00000541318 ERCC6Q03468 1493 aa18.99■□□□□ 0.63
KDM2B-212ENST00000541318 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
KDM2B-212ENST00000541318 BAZ1BQ9UIG0 1483 aaKnown RBP18.94■□□□□ 0.62
KDM2B-212ENST00000541318 NESP48681 1621 aa18.88■□□□□ 0.61
KDM2B-212ENST00000541318 MROH2BQ7Z745 1585 aa18.84■□□□□ 0.61
KDM2B-212ENST00000541318 LAMC3Q9Y6N6 1575 aa18.81■□□□□ 0.6
KDM2B-212ENST00000541318 THOC2Q8NI27 1593 aaKnown RBP18.76■□□□□ 0.59
KDM2B-212ENST00000541318 KIF21AQ7Z4S6 1674 aa18.68■□□□□ 0.58
KDM2B-212ENST00000541318 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
KDM2B-212ENST00000541318 WIZO95785 1651 aa18.61■□□□□ 0.57
KDM2B-212ENST00000541318 CADPSQ9ULU8 1353 aa18.61■□□□□ 0.57
KDM2B-212ENST00000541318 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.55
KDM2B-212ENST00000541318 WDR62O43379 1518 aa18.49■□□□□ 0.55
KDM2B-212ENST00000541318 RSF1Q96T23 1441 aaPredicted RBP18.43■□□□□ 0.54
KDM2B-212ENST00000541318 CEP164Q9UPV0 1460 aa18.42■□□□□ 0.54
KDM2B-212ENST00000541318 CFTRP13569 1480 aa18.4■□□□□ 0.54
KDM2B-212ENST00000541318 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
KDM2B-212ENST00000541318 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.54
KDM2B-212ENST00000541318 PRDM2Q13029 1718 aa18.27■□□□□ 0.52
KDM2B-212ENST00000541318 URB2Q14146 1524 aaKnown RBP18.24■□□□□ 0.51
KDM2B-212ENST00000541318 CCDC88BA6NC98 1476 aa18.17■□□□□ 0.5
KDM2B-212ENST00000541318 OSCARQ8IYS5 282 aa18.1■□□□□ 0.49
KDM2B-212ENST00000541318 TRIM41Q8WV44 630 aa18.1■□□□□ 0.49
KDM2B-212ENST00000541318 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
KDM2B-212ENST00000541318 TOPBP1Q92547 1522 aa18.05■□□□□ 0.48
KDM2B-212ENST00000541318 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
KDM2B-212ENST00000541318 ZNF608Q9ULD9 1512 aaPredicted RBP18.01■□□□□ 0.47
KDM2B-212ENST00000541318 DNMBPQ6XZF7 1577 aa18■□□□□ 0.47
KDM2B-212ENST00000541318 EIF4G3O43432 1585 aaKnown RBP17.94■□□□□ 0.46
KDM2B-212ENST00000541318 RIMBP3CA6NJZ7 1639 aa17.91■□□□□ 0.46
KDM2B-212ENST00000541318 RIMBP3BA6NNM3 1639 aa17.91■□□□□ 0.46
KDM2B-212ENST00000541318 TARBP1Q13395 1621 aaKnown RBP17.91■□□□□ 0.46
KDM2B-212ENST00000541318 RIMBP3Q9UFD9 1639 aa17.91■□□□□ 0.46
KDM2B-212ENST00000541318 POLA1P09884 1462 aaPredicted RBP17.85■□□□□ 0.45
KDM2B-212ENST00000541318 ARHGEF11O15085 1522 aa17.84■□□□□ 0.45
KDM2B-212ENST00000541318 AQRO60306 1485 aaKnown RBP eCLIP17.83■□□□□ 0.45
KDM2B-212ENST00000541318 CHD1O14646 1710 aa17.82■□□□□ 0.44
KDM2B-212ENST00000541318 WDR97A6NE52 1622 aa17.78■□□□□ 0.44
KDM2B-212ENST00000541318 RAD54L2Q9Y4B4 1467 aa17.76■□□□□ 0.43
KDM2B-212ENST00000541318 SOGA1O94964 1423 aa17.75■□□□□ 0.43
KDM2B-212ENST00000541318 FGD5Q6ZNL6 1462 aa17.73■□□□□ 0.43
KDM2B-212ENST00000541318 CUX1P39880 1505 aa17.71■□□□□ 0.43
KDM2B-212ENST00000541318 TDRD9Q8NDG6 1382 aaKnown RBP17.69■□□□□ 0.42
KDM2B-212ENST00000541318 FBLN2P98095 1184 aa17.66■□□□□ 0.42
KDM2B-212ENST00000541318 SNAPC4Q5SXM2 1469 aa17.66■□□□□ 0.42
KDM2B-212ENST00000541318 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
KDM2B-212ENST00000541318 MAGI1Q96QZ7 1491 aaPredicted RBP17.65■□□□□ 0.42
KDM2B-212ENST00000541318 CLASP1Q7Z460 1538 aa17.64■□□□□ 0.41
KDM2B-212ENST00000541318 CYB5RLQ6IPT4 315 aa17.64■□□□□ 0.41
KDM2B-212ENST00000541318 GRIN2BQ13224 1484 aa17.63■□□□□ 0.41
KDM2B-212ENST00000541318 SYNJ1O43426 1573 aa17.61■□□□□ 0.41
KDM2B-212ENST00000541318 PBRM1Q86U86 1689 aa17.58■□□□□ 0.41
KDM2B-212ENST00000541318 SYNJ2O15056 1496 aa17.58■□□□□ 0.41
KDM2B-212ENST00000541318 CHMP7Q8WUX9 453 aaPredicted RBP17.56■□□□□ 0.4
KDM2B-212ENST00000541318 ABCA10Q8WWZ4 1543 aa17.56■□□□□ 0.4
KDM2B-212ENST00000541318 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
KDM2B-212ENST00000541318 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
KDM2B-212ENST00000541318 SUPT5HO00267 1087 aaKnown RBP17.47■□□□□ 0.39
KDM2B-212ENST00000541318 BIVM-ERCC5R4GMW8 1640 aa17.46■□□□□ 0.39
KDM2B-212ENST00000541318 WRNQ14191 1432 aaPredicted RBP eCLIP17.45■□□□□ 0.38
KDM2B-212ENST00000541318 TOP2BQ02880 1626 aa17.44■□□□□ 0.38
KDM2B-212ENST00000541318 TRHP20396 242 aaPredicted RBP17.44■□□□□ 0.38
KDM2B-212ENST00000541318 ADAMTS12P58397 1594 aa17.4■□□□□ 0.38
KDM2B-212ENST00000541318 GRIN2AQ12879 1464 aa17.4■□□□□ 0.38
KDM2B-212ENST00000541318 NUP160Q12769 1436 aa17.37■□□□□ 0.37
KDM2B-212ENST00000541318 CEP170Q5SW79 1584 aa17.35■□□□□ 0.37
KDM2B-212ENST00000541318 ERICH3Q5RHP9 1530 aa17.34■□□□□ 0.37
KDM2B-212ENST00000541318 FHAD1B1AJZ9 1412 aa17.33■□□□□ 0.36
KDM2B-212ENST00000541318 SHROOM2Q13796 1616 aa17.32■□□□□ 0.36
KDM2B-212ENST00000541318 ERCC6L2Q5T890 1561 aa17.31■□□□□ 0.36
KDM2B-212ENST00000541318 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
KDM2B-212ENST00000541318 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
KDM2B-212ENST00000541318 JPH4Q96JJ6 628 aa17.13■□□□□ 0.33
KDM2B-212ENST00000541318 KIF13AQ9H1H9 1805 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms