RNA–Protein interactions for RNA: ENST00000541233.1

CD27-202, Transcript of CD27 molecule, humanhuman

TSL 2

Gene CD27, Length 1,045 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD27-202ENST00000541233 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.76
CD27-202ENST00000541233 CCDC180Q9P1Z9 1646 aa28.94■■■□□ 2.22
CD27-202ENST00000541233 ABCC9O60706 1549 aa28.62■■■□□ 2.17
CD27-202ENST00000541233 RB1CC1Q8TDY2 1594 aa27.42■■□□□ 1.98
CD27-202ENST00000541233 NACADO15069 1562 aa27.3■■□□□ 1.96
CD27-202ENST00000541233 MYO15BQ96JP2 1530 aa27.06■■□□□ 1.92
CD27-202ENST00000541233 DCAF8L2P0C7V8 631 aa26.96■■□□□ 1.91
CD27-202ENST00000541233 ZCCHC6Q5VYS8 1495 aaKnown RBP26.81■■□□□ 1.88
CD27-202ENST00000541233 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
CD27-202ENST00000541233 UNC13AQ9UPW8 1703 aa26.75■■□□□ 1.87
CD27-202ENST00000541233 DNAJC5BQ9UF47 199 aa26.63■■□□□ 1.85
CD27-202ENST00000541233 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
CD27-202ENST00000541233 BICRAQ9NZM4 1560 aa26.59■■□□□ 1.85
CD27-202ENST00000541233 SHROOM4Q9ULL8 1493 aa26.39■■□□□ 1.82
CD27-202ENST00000541233 SCRIBQ14160 1630 aa26.27■■□□□ 1.8
CD27-202ENST00000541233 EIF4G1Q04637 1599 aaKnown RBP25.93■■□□□ 1.74
CD27-202ENST00000541233 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
CD27-202ENST00000541233 CECR2Q9BXF3 1484 aa25.8■■□□□ 1.72
CD27-202ENST00000541233 NCAPD3P42695 1498 aa25.18■■□□□ 1.62
CD27-202ENST00000541233 SMARCA4P51532 1647 aa25.14■■□□□ 1.61
CD27-202ENST00000541233 ATAD2BQ9ULI0 1458 aa25.1■■□□□ 1.61
CD27-202ENST00000541233 SMARCA2P51531 1590 aa25.09■■□□□ 1.61
CD27-202ENST00000541233 BAZ1AQ9NRL2 1556 aaPredicted RBP25.06■■□□□ 1.6
CD27-202ENST00000541233 HMGXB3Q12766 1538 aa25.05■■□□□ 1.6
CD27-202ENST00000541233 PEG3Q9GZU2 1588 aa24.95■■□□□ 1.58
CD27-202ENST00000541233 BAZ1BQ9UIG0 1483 aaKnown RBP24.87■■□□□ 1.57
CD27-202ENST00000541233 MROH2BQ7Z745 1585 aa24.83■■□□□ 1.57
CD27-202ENST00000541233 ERCC6Q03468 1493 aa24.73■■□□□ 1.55
CD27-202ENST00000541233 CUX2O14529 1486 aa24.71■■□□□ 1.55
CD27-202ENST00000541233 NESP48681 1621 aa24.64■■□□□ 1.53
CD27-202ENST00000541233 LAMC3Q9Y6N6 1575 aa24.6■■□□□ 1.53
CD27-202ENST00000541233 WIZO95785 1651 aa24.52■■□□□ 1.52
CD27-202ENST00000541233 THOC2Q8NI27 1593 aaKnown RBP24.44■■□□□ 1.5
CD27-202ENST00000541233 PDS5BQ9NTI5 1447 aa24.43■■□□□ 1.5
CD27-202ENST00000541233 DNAJC5Q9H3Z4 198 aa24.4■■□□□ 1.5
CD27-202ENST00000541233 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
CD27-202ENST00000541233 RSF1Q96T23 1441 aaPredicted RBP24.39■■□□□ 1.5
CD27-202ENST00000541233 KIF21AQ7Z4S6 1674 aa24.36■■□□□ 1.49
CD27-202ENST00000541233 TOP2AP11388 1531 aaKnown RBP24.29■■□□□ 1.48
CD27-202ENST00000541233 MRC2Q9UBG0 1479 aa24.2■■□□□ 1.47
CD27-202ENST00000541233 CFTRP13569 1480 aa24.19■■□□□ 1.46
CD27-202ENST00000541233 WDR62O43379 1518 aa24.16■■□□□ 1.46
CD27-202ENST00000541233 CEP164Q9UPV0 1460 aa24.13■■□□□ 1.45
CD27-202ENST00000541233 FANCD2Q9BXW9 1451 aa24.11■■□□□ 1.45
CD27-202ENST00000541233 PRDM2Q13029 1718 aa23.97■■□□□ 1.43
CD27-202ENST00000541233 CCDC88BA6NC98 1476 aa23.96■■□□□ 1.43
CD27-202ENST00000541233 URB2Q14146 1524 aaKnown RBP23.89■■□□□ 1.42
CD27-202ENST00000541233 ABCC8Q09428 1581 aa23.69■■□□□ 1.38
CD27-202ENST00000541233 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
CD27-202ENST00000541233 IFT140Q96RY7 1462 aa23.67■■□□□ 1.38
CD27-202ENST00000541233 DNMBPQ6XZF7 1577 aa23.64■■□□□ 1.37
CD27-202ENST00000541233 ZNF608Q9ULD9 1512 aaPredicted RBP23.54■■□□□ 1.36
CD27-202ENST00000541233 OSCARQ8IYS5 282 aa23.52■■□□□ 1.36
CD27-202ENST00000541233 EIF4G3O43432 1585 aaKnown RBP23.47■■□□□ 1.35
CD27-202ENST00000541233 TARBP1Q13395 1621 aaKnown RBP23.47■■□□□ 1.35
CD27-202ENST00000541233 POLA1P09884 1462 aaPredicted RBP23.45■■□□□ 1.34
CD27-202ENST00000541233 WDR97A6NE52 1622 aa23.34■■□□□ 1.33
CD27-202ENST00000541233 AQRO60306 1485 aaKnown RBP eCLIP23.33■■□□□ 1.33
CD27-202ENST00000541233 CUX1P39880 1505 aa23.33■■□□□ 1.32
CD27-202ENST00000541233 SOGA1O94964 1423 aa23.32■■□□□ 1.32
CD27-202ENST00000541233 FGD5Q6ZNL6 1462 aa23.31■■□□□ 1.32
CD27-202ENST00000541233 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
CD27-202ENST00000541233 SUPT5HO00267 1087 aaKnown RBP23.3■■□□□ 1.32
CD27-202ENST00000541233 TRIM41Q8WV44 630 aa23.3■■□□□ 1.32
CD27-202ENST00000541233 CHD1O14646 1710 aa23.23■■□□□ 1.31
CD27-202ENST00000541233 RIMBP3CA6NJZ7 1639 aa23.22■■□□□ 1.31
CD27-202ENST00000541233 RIMBP3BA6NNM3 1639 aa23.22■■□□□ 1.31
CD27-202ENST00000541233 RIMBP3Q9UFD9 1639 aa23.22■■□□□ 1.31
CD27-202ENST00000541233 TDRD9Q8NDG6 1382 aaKnown RBP23.21■■□□□ 1.31
CD27-202ENST00000541233 ARHGEF11O15085 1522 aa23.18■■□□□ 1.3
CD27-202ENST00000541233 SNAPC4Q5SXM2 1469 aa23.15■■□□□ 1.3
CD27-202ENST00000541233 MAGI1Q96QZ7 1491 aaPredicted RBP23.15■■□□□ 1.3
CD27-202ENST00000541233 GRIN2BQ13224 1484 aa23.14■■□□□ 1.29
CD27-202ENST00000541233 ABCA10Q8WWZ4 1543 aa23.11■■□□□ 1.29
CD27-202ENST00000541233 FBLN2P98095 1184 aa23.08■■□□□ 1.29
CD27-202ENST00000541233 GAPVD1Q14C86 1478 aa23.06■■□□□ 1.28
CD27-202ENST00000541233 ABCA5Q8WWZ7 1642 aa23.06■■□□□ 1.28
CD27-202ENST00000541233 PBRM1Q86U86 1689 aa23.05■■□□□ 1.28
CD27-202ENST00000541233 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
CD27-202ENST00000541233 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
CD27-202ENST00000541233 TOP2BQ02880 1626 aa23.04■■□□□ 1.28
CD27-202ENST00000541233 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
CD27-202ENST00000541233 SYNJ1O43426 1573 aa23.02■■□□□ 1.28
CD27-202ENST00000541233 WRNQ14191 1432 aaPredicted RBP eCLIP23.02■■□□□ 1.28
CD27-202ENST00000541233 CHMP7Q8WUX9 453 aaPredicted RBP23■■□□□ 1.27
CD27-202ENST00000541233 ARAP1Q96P48 1450 aa22.96■■□□□ 1.27
CD27-202ENST00000541233 CYB5RLQ6IPT4 315 aa22.89■■□□□ 1.25
CD27-202ENST00000541233 ADAMTS12P58397 1594 aa22.87■■□□□ 1.25
CD27-202ENST00000541233 GRIN2AQ12879 1464 aa22.84■■□□□ 1.25
CD27-202ENST00000541233 ERICH3Q5RHP9 1530 aa22.83■■□□□ 1.25
CD27-202ENST00000541233 FHAD1B1AJZ9 1412 aa22.8■■□□□ 1.24
CD27-202ENST00000541233 NUP160Q12769 1436 aa22.78■■□□□ 1.24
CD27-202ENST00000541233 CEP170Q5SW79 1584 aa22.73■■□□□ 1.23
CD27-202ENST00000541233 SHROOM2Q13796 1616 aa22.66■■□□□ 1.22
CD27-202ENST00000541233 ERCC6L2Q5T890 1561 aa22.59■■□□□ 1.21
CD27-202ENST00000541233 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
CD27-202ENST00000541233 TRHP20396 242 aaPredicted RBP22.56■■□□□ 1.2
CD27-202ENST00000541233 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
CD27-202ENST00000541233 CUL7Q14999 1698 aa22.54■■□□□ 1.2
CD27-202ENST00000541233 IGF1RP08069 1367 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms