RNA–Protein interactions for RNA: ENST00000541181.1

PHC1-210, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-210ENST00000541181 NISCHQ9Y2I1 1504 aa24.75■■□□□ 1.55
PHC1-210ENST00000541181 CCDC180Q9P1Z9 1646 aa22.03■■□□□ 1.12
PHC1-210ENST00000541181 ABCC9O60706 1549 aa21.57■■□□□ 1.04
PHC1-210ENST00000541181 RB1CC1Q8TDY2 1594 aa20.72■□□□□ 0.91
PHC1-210ENST00000541181 NACADO15069 1562 aa20.69■□□□□ 0.9
PHC1-210ENST00000541181 DCAF8L2P0C7V8 631 aa20.69■□□□□ 0.9
PHC1-210ENST00000541181 ZCCHC6Q5VYS8 1495 aaKnown RBP20.6■□□□□ 0.89
PHC1-210ENST00000541181 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
PHC1-210ENST00000541181 DCAF1Q9Y4B6 1507 aa20.45■□□□□ 0.86
PHC1-210ENST00000541181 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.85
PHC1-210ENST00000541181 PABPN1Q86U42 306 aaKnown RBP eCLIP20.15■□□□□ 0.82
PHC1-210ENST00000541181 BICRAQ9NZM4 1560 aa20.15■□□□□ 0.82
PHC1-210ENST00000541181 SCRIBQ14160 1630 aa20.1■□□□□ 0.81
PHC1-210ENST00000541181 DNAJC5BQ9UF47 199 aa19.86■□□□□ 0.77
PHC1-210ENST00000541181 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.76
PHC1-210ENST00000541181 EIF4G1Q04637 1599 aaKnown RBP19.58■□□□□ 0.73
PHC1-210ENST00000541181 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
PHC1-210ENST00000541181 CECR2Q9BXF3 1484 aa19.36■□□□□ 0.69
PHC1-210ENST00000541181 SMARCA4P51532 1647 aa19.22■□□□□ 0.67
PHC1-210ENST00000541181 BAZ1AQ9NRL2 1556 aaPredicted RBP19.17■□□□□ 0.66
PHC1-210ENST00000541181 ATAD2BQ9ULI0 1458 aa19.1■□□□□ 0.65
PHC1-210ENST00000541181 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
PHC1-210ENST00000541181 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
PHC1-210ENST00000541181 SMARCA2P51531 1590 aa19.06■□□□□ 0.64
PHC1-210ENST00000541181 PEG3Q9GZU2 1588 aa19.02■□□□□ 0.63
PHC1-210ENST00000541181 HMGXB3Q12766 1538 aa18.99■□□□□ 0.63
PHC1-210ENST00000541181 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
PHC1-210ENST00000541181 WIZO95785 1651 aa18.92■□□□□ 0.62
PHC1-210ENST00000541181 RSF1Q96T23 1441 aaPredicted RBP18.84■□□□□ 0.61
PHC1-210ENST00000541181 NESP48681 1621 aa18.68■□□□□ 0.58
PHC1-210ENST00000541181 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
PHC1-210ENST00000541181 LAMC3Q9Y6N6 1575 aa18.59■□□□□ 0.57
PHC1-210ENST00000541181 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
PHC1-210ENST00000541181 CADPSQ9ULU8 1353 aa18.52■□□□□ 0.55
PHC1-210ENST00000541181 KIF21AQ7Z4S6 1674 aa18.5■□□□□ 0.55
PHC1-210ENST00000541181 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.54
PHC1-210ENST00000541181 PDS5BQ9NTI5 1447 aa18.44■□□□□ 0.54
PHC1-210ENST00000541181 CFTRP13569 1480 aa18.41■□□□□ 0.54
PHC1-210ENST00000541181 THOC2Q8NI27 1593 aaKnown RBP18.4■□□□□ 0.54
PHC1-210ENST00000541181 CUX2O14529 1486 aa18.37■□□□□ 0.53
PHC1-210ENST00000541181 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
PHC1-210ENST00000541181 SUPT5HO00267 1087 aaKnown RBP18.35■□□□□ 0.53
PHC1-210ENST00000541181 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
PHC1-210ENST00000541181 CEP164Q9UPV0 1460 aa18.29■□□□□ 0.52
PHC1-210ENST00000541181 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
PHC1-210ENST00000541181 WDR62O43379 1518 aa18.23■□□□□ 0.51
PHC1-210ENST00000541181 URB2Q14146 1524 aaKnown RBP18.16■□□□□ 0.5
PHC1-210ENST00000541181 TOPBP1Q92547 1522 aa18.03■□□□□ 0.48
PHC1-210ENST00000541181 DNMBPQ6XZF7 1577 aa18.01■□□□□ 0.47
PHC1-210ENST00000541181 ABCC8Q09428 1581 aa18■□□□□ 0.47
PHC1-210ENST00000541181 CUX1P39880 1505 aa17.91■□□□□ 0.46
PHC1-210ENST00000541181 IFT140Q96RY7 1462 aa17.9■□□□□ 0.46
PHC1-210ENST00000541181 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
PHC1-210ENST00000541181 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
PHC1-210ENST00000541181 ZNF608Q9ULD9 1512 aaPredicted RBP17.87■□□□□ 0.45
PHC1-210ENST00000541181 DNAJC5Q9H3Z4 198 aa17.86■□□□□ 0.45
PHC1-210ENST00000541181 FGD5Q6ZNL6 1462 aa17.83■□□□□ 0.45
PHC1-210ENST00000541181 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
PHC1-210ENST00000541181 SOGA1O94964 1423 aa17.81■□□□□ 0.44
PHC1-210ENST00000541181 EIF4G3O43432 1585 aaKnown RBP17.79■□□□□ 0.44
PHC1-210ENST00000541181 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
PHC1-210ENST00000541181 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.43
PHC1-210ENST00000541181 SYNJ1O43426 1573 aa17.75■□□□□ 0.43
PHC1-210ENST00000541181 TOP2BQ02880 1626 aa17.75■□□□□ 0.43
PHC1-210ENST00000541181 WRNQ14191 1432 aaPredicted RBP eCLIP17.74■□□□□ 0.43
PHC1-210ENST00000541181 WDR97A6NE52 1622 aa17.74■□□□□ 0.43
PHC1-210ENST00000541181 TDRD9Q8NDG6 1382 aaKnown RBP17.71■□□□□ 0.43
PHC1-210ENST00000541181 ABCA10Q8WWZ4 1543 aa17.65■□□□□ 0.42
PHC1-210ENST00000541181 CHD1O14646 1710 aa17.63■□□□□ 0.41
PHC1-210ENST00000541181 PBRM1Q86U86 1689 aa17.62■□□□□ 0.41
PHC1-210ENST00000541181 ABCA5Q8WWZ7 1642 aa17.61■□□□□ 0.41
PHC1-210ENST00000541181 OSCARQ8IYS5 282 aa17.61■□□□□ 0.41
PHC1-210ENST00000541181 GAPVD1Q14C86 1478 aa17.59■□□□□ 0.41
PHC1-210ENST00000541181 GRIN2BQ13224 1484 aa17.58■□□□□ 0.41
PHC1-210ENST00000541181 SNAPC4Q5SXM2 1469 aa17.57■□□□□ 0.4
PHC1-210ENST00000541181 MAGI1Q96QZ7 1491 aaPredicted RBP17.53■□□□□ 0.4
PHC1-210ENST00000541181 FBLN2P98095 1184 aa17.53■□□□□ 0.4
PHC1-210ENST00000541181 SYNJ2O15056 1496 aa17.47■□□□□ 0.39
PHC1-210ENST00000541181 CHMP7Q8WUX9 453 aaPredicted RBP17.46■□□□□ 0.39
PHC1-210ENST00000541181 ERICH3Q5RHP9 1530 aa17.43■□□□□ 0.38
PHC1-210ENST00000541181 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
PHC1-210ENST00000541181 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.37
PHC1-210ENST00000541181 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.37
PHC1-210ENST00000541181 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.37
PHC1-210ENST00000541181 CLASP1Q7Z460 1538 aa17.37■□□□□ 0.37
PHC1-210ENST00000541181 FHAD1B1AJZ9 1412 aa17.37■□□□□ 0.37
PHC1-210ENST00000541181 KIF27Q86VH2 1401 aa17.37■□□□□ 0.37
PHC1-210ENST00000541181 GRIN2AQ12879 1464 aa17.37■□□□□ 0.37
PHC1-210ENST00000541181 ARHGEF11O15085 1522 aa17.34■□□□□ 0.37
PHC1-210ENST00000541181 IGF1RP08069 1367 aa17.33■□□□□ 0.36
PHC1-210ENST00000541181 CEP170Q5SW79 1584 aa17.32■□□□□ 0.36
PHC1-210ENST00000541181 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
PHC1-210ENST00000541181 CUL7Q14999 1698 aa17.29■□□□□ 0.36
PHC1-210ENST00000541181 NUP160Q12769 1436 aa17.29■□□□□ 0.36
PHC1-210ENST00000541181 RUSC2Q8N2Y8 1516 aa17.28■□□□□ 0.36
PHC1-210ENST00000541181 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
PHC1-210ENST00000541181 CARMIL1Q5VZK9 1371 aa17.21■□□□□ 0.35
PHC1-210ENST00000541181 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
PHC1-210ENST00000541181 CYB5RLQ6IPT4 315 aa17.19■□□□□ 0.34
PHC1-210ENST00000541181 ERCC6L2Q5T890 1561 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms