RNA–Protein interactions for RNA: ENST00000541081.1

TM7SF3-209, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 516 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-209ENST00000541081 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
TM7SF3-209ENST00000541081 AEBP2Q6ZN18 517 aaPredicted RBP22.42■■□□□ 1.18
TM7SF3-209ENST00000541081 CHIC1Q5VXU3 224 aa21.24■□□□□ 0.99
TM7SF3-209ENST00000541081 CCDC180Q9P1Z9 1646 aa20.35■□□□□ 0.85
TM7SF3-209ENST00000541081 ABCC9O60706 1549 aa20.1■□□□□ 0.81
TM7SF3-209ENST00000541081 RB1CC1Q8TDY2 1594 aa19.25■□□□□ 0.67
TM7SF3-209ENST00000541081 NACADO15069 1562 aa19.15■□□□□ 0.66
TM7SF3-209ENST00000541081 DCAF8L2P0C7V8 631 aa19.14■□□□□ 0.65
TM7SF3-209ENST00000541081 SENP3Q9H4L4 574 aaPredicted RBP19.06■□□□□ 0.64
TM7SF3-209ENST00000541081 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
TM7SF3-209ENST00000541081 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
TM7SF3-209ENST00000541081 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
TM7SF3-209ENST00000541081 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.61
TM7SF3-209ENST00000541081 DCAF1Q9Y4B6 1507 aa18.79■□□□□ 0.6
TM7SF3-209ENST00000541081 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
TM7SF3-209ENST00000541081 BICRAQ9NZM4 1560 aa18.64■□□□□ 0.57
TM7SF3-209ENST00000541081 DNAJC5BQ9UF47 199 aa18.58■□□□□ 0.56
TM7SF3-209ENST00000541081 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
TM7SF3-209ENST00000541081 SHROOM4Q9ULL8 1493 aa18.42■□□□□ 0.54
TM7SF3-209ENST00000541081 EIF4G1Q04637 1599 aaKnown RBP18.18■□□□□ 0.5
TM7SF3-209ENST00000541081 CC2D2AQ9P2K1 1620 aa18.17■□□□□ 0.5
TM7SF3-209ENST00000541081 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
TM7SF3-209ENST00000541081 FOXD1Q16676 465 aa17.82■□□□□ 0.44
TM7SF3-209ENST00000541081 SMARCA4P51532 1647 aa17.71■□□□□ 0.43
TM7SF3-209ENST00000541081 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
TM7SF3-209ENST00000541081 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
TM7SF3-209ENST00000541081 SMARCA2P51531 1590 aa17.64■□□□□ 0.41
TM7SF3-209ENST00000541081 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
TM7SF3-209ENST00000541081 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
TM7SF3-209ENST00000541081 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
TM7SF3-209ENST00000541081 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.39
TM7SF3-209ENST00000541081 PEG3Q9GZU2 1588 aa17.52■□□□□ 0.39
TM7SF3-209ENST00000541081 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
TM7SF3-209ENST00000541081 WIZO95785 1651 aa17.36■□□□□ 0.37
TM7SF3-209ENST00000541081 NESP48681 1621 aa17.31■□□□□ 0.36
TM7SF3-209ENST00000541081 LAMC3Q9Y6N6 1575 aa17.27■□□□□ 0.35
TM7SF3-209ENST00000541081 RSF1Q96T23 1441 aaPredicted RBP17.22■□□□□ 0.35
TM7SF3-209ENST00000541081 CUX2O14529 1486 aa17.22■□□□□ 0.35
TM7SF3-209ENST00000541081 KIF21AQ7Z4S6 1674 aa17.15■□□□□ 0.34
TM7SF3-209ENST00000541081 PDS5BQ9NTI5 1447 aa17.14■□□□□ 0.33
TM7SF3-209ENST00000541081 TOP2AP11388 1531 aaKnown RBP17.14■□□□□ 0.33
TM7SF3-209ENST00000541081 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
TM7SF3-209ENST00000541081 THOC2Q8NI27 1593 aaKnown RBP17.11■□□□□ 0.33
TM7SF3-209ENST00000541081 CFTRP13569 1480 aa16.99■□□□□ 0.31
TM7SF3-209ENST00000541081 MRC2Q9UBG0 1479 aa16.98■□□□□ 0.31
TM7SF3-209ENST00000541081 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
TM7SF3-209ENST00000541081 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
TM7SF3-209ENST00000541081 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
TM7SF3-209ENST00000541081 CCDC88BA6NC98 1476 aa16.93■□□□□ 0.3
TM7SF3-209ENST00000541081 WDR62O43379 1518 aa16.92■□□□□ 0.3
TM7SF3-209ENST00000541081 PRDM2Q13029 1718 aa16.92■□□□□ 0.3
TM7SF3-209ENST00000541081 DNAJC5Q9H3Z4 198 aa16.91■□□□□ 0.3
TM7SF3-209ENST00000541081 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
TM7SF3-209ENST00000541081 SUPT5HO00267 1087 aaKnown RBP16.7■□□□□ 0.26
TM7SF3-209ENST00000541081 PPP6R1Q9UPN7 881 aa16.69■□□□□ 0.26
TM7SF3-209ENST00000541081 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
TM7SF3-209ENST00000541081 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
TM7SF3-209ENST00000541081 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
TM7SF3-209ENST00000541081 ADRA2BP18089 450 aa16.64■□□□□ 0.25
TM7SF3-209ENST00000541081 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
TM7SF3-209ENST00000541081 MSH5O43196 834 aa16.61■□□□□ 0.25
TM7SF3-209ENST00000541081 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
TM7SF3-209ENST00000541081 ZNF608Q9ULD9 1512 aaPredicted RBP16.54■□□□□ 0.24
TM7SF3-209ENST00000541081 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
TM7SF3-209ENST00000541081 POLA1P09884 1462 aaPredicted RBP16.5■□□□□ 0.23
TM7SF3-209ENST00000541081 TARBP1Q13395 1621 aaKnown RBP16.49■□□□□ 0.23
TM7SF3-209ENST00000541081 OSCARQ8IYS5 282 aa16.47■□□□□ 0.23
TM7SF3-209ENST00000541081 CUX1P39880 1505 aa16.45■□□□□ 0.22
TM7SF3-209ENST00000541081 SOGA1O94964 1423 aa16.45■□□□□ 0.22
TM7SF3-209ENST00000541081 FGD5Q6ZNL6 1462 aa16.44■□□□□ 0.22
TM7SF3-209ENST00000541081 RAD54L2Q9Y4B4 1467 aa16.44■□□□□ 0.22
TM7SF3-209ENST00000541081 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.22
TM7SF3-209ENST00000541081 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
TM7SF3-209ENST00000541081 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
TM7SF3-209ENST00000541081 CHD1O14646 1710 aa16.36■□□□□ 0.21
TM7SF3-209ENST00000541081 TRIM41Q8WV44 630 aa16.33■□□□□ 0.2
TM7SF3-209ENST00000541081 FBLN2P98095 1184 aa16.32■□□□□ 0.2
TM7SF3-209ENST00000541081 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
TM7SF3-209ENST00000541081 WRNQ14191 1432 aaPredicted RBP eCLIP16.28■□□□□ 0.2
TM7SF3-209ENST00000541081 BIVM-ERCC5R4GMW8 1640 aa16.28■□□□□ 0.2
TM7SF3-209ENST00000541081 POTEDQ86YR6 584 aa16.28■□□□□ 0.2
TM7SF3-209ENST00000541081 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
TM7SF3-209ENST00000541081 PBRM1Q86U86 1689 aa16.27■□□□□ 0.2
TM7SF3-209ENST00000541081 TOP2BQ02880 1626 aa16.27■□□□□ 0.2
TM7SF3-209ENST00000541081 ABCA10Q8WWZ4 1543 aa16.26■□□□□ 0.19
TM7SF3-209ENST00000541081 MAGI1Q96QZ7 1491 aaPredicted RBP16.26■□□□□ 0.19
TM7SF3-209ENST00000541081 SYNJ1O43426 1573 aa16.26■□□□□ 0.19
TM7SF3-209ENST00000541081 GAPVD1Q14C86 1478 aa16.25■□□□□ 0.19
TM7SF3-209ENST00000541081 RIMBP3CA6NJZ7 1639 aa16.25■□□□□ 0.19
TM7SF3-209ENST00000541081 RIMBP3BA6NNM3 1639 aa16.25■□□□□ 0.19
TM7SF3-209ENST00000541081 RIMBP3Q9UFD9 1639 aa16.25■□□□□ 0.19
TM7SF3-209ENST00000541081 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
TM7SF3-209ENST00000541081 CHMP7Q8WUX9 453 aaPredicted RBP16.22■□□□□ 0.19
TM7SF3-209ENST00000541081 ARHGEF11O15085 1522 aa16.21■□□□□ 0.19
TM7SF3-209ENST00000541081 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
TM7SF3-209ENST00000541081 CLASP1Q7Z460 1538 aa16.13■□□□□ 0.17
TM7SF3-209ENST00000541081 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
TM7SF3-209ENST00000541081 CYB5RLQ6IPT4 315 aa16.08■□□□□ 0.16
TM7SF3-209ENST00000541081 ERICH3Q5RHP9 1530 aa16.08■□□□□ 0.16
TM7SF3-209ENST00000541081 GRIN2AQ12879 1464 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms