RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-215ENST00000540987 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
POLE-215ENST00000540987 CCDC180Q9P1Z9 1646 aa30.23■■■□□ 2.43
POLE-215ENST00000540987 ABCC9O60706 1549 aa29.78■■■□□ 2.36
POLE-215ENST00000540987 RB1CC1Q8TDY2 1594 aa28.53■■■□□ 2.16
POLE-215ENST00000540987 NACADO15069 1562 aa28.42■■■□□ 2.14
POLE-215ENST00000540987 DCAF8L2P0C7V8 631 aa28.19■■■□□ 2.1
POLE-215ENST00000540987 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
POLE-215ENST00000540987 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
POLE-215ENST00000540987 DCAF1Q9Y4B6 1507 aa27.97■■■□□ 2.07
POLE-215ENST00000540987 UNC13AQ9UPW8 1703 aa27.97■■■□□ 2.07
POLE-215ENST00000540987 BICRAQ9NZM4 1560 aa27.75■■■□□ 2.03
POLE-215ENST00000540987 PABPN1Q86U42 306 aaKnown RBP eCLIP27.72■■■□□ 2.03
POLE-215ENST00000540987 SCRIBQ14160 1630 aa27.57■■■□□ 2
POLE-215ENST00000540987 DNAJC5BQ9UF47 199 aa27.53■■■□□ 2
POLE-215ENST00000540987 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
POLE-215ENST00000540987 EIF4G1Q04637 1599 aaKnown RBP27■■□□□ 1.91
POLE-215ENST00000540987 CC2D2AQ9P2K1 1620 aa26.94■■□□□ 1.9
POLE-215ENST00000540987 CECR2Q9BXF3 1484 aa26.77■■□□□ 1.88
POLE-215ENST00000540987 SMARCA4P51532 1647 aa26.35■■□□□ 1.81
POLE-215ENST00000540987 BAZ1AQ9NRL2 1556 aaPredicted RBP26.23■■□□□ 1.79
POLE-215ENST00000540987 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
POLE-215ENST00000540987 NCAPD3P42695 1498 aa26.22■■□□□ 1.79
POLE-215ENST00000540987 SMARCA2P51531 1590 aa26.16■■□□□ 1.78
POLE-215ENST00000540987 HMGXB3Q12766 1538 aa26.13■■□□□ 1.77
POLE-215ENST00000540987 MROH2BQ7Z745 1585 aa26.1■■□□□ 1.77
POLE-215ENST00000540987 PEG3Q9GZU2 1588 aa26.08■■□□□ 1.77
POLE-215ENST00000540987 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
POLE-215ENST00000540987 WIZO95785 1651 aa25.81■■□□□ 1.72
POLE-215ENST00000540987 NESP48681 1621 aa25.73■■□□□ 1.71
POLE-215ENST00000540987 RSF1Q96T23 1441 aaPredicted RBP25.67■■□□□ 1.7
POLE-215ENST00000540987 ERCC6Q03468 1493 aa25.64■■□□□ 1.69
POLE-215ENST00000540987 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
POLE-215ENST00000540987 TOP2AP11388 1531 aaKnown RBP25.52■■□□□ 1.68
POLE-215ENST00000540987 CUX2O14529 1486 aa25.49■■□□□ 1.67
POLE-215ENST00000540987 KIF21AQ7Z4S6 1674 aa25.45■■□□□ 1.66
POLE-215ENST00000540987 THOC2Q8NI27 1593 aaKnown RBP25.44■■□□□ 1.66
POLE-215ENST00000540987 CADPSQ9ULU8 1353 aa25.42■■□□□ 1.66
POLE-215ENST00000540987 PDS5BQ9NTI5 1447 aa25.36■■□□□ 1.65
POLE-215ENST00000540987 CFTRP13569 1480 aa25.26■■□□□ 1.63
POLE-215ENST00000540987 MRC2Q9UBG0 1479 aa25.19■■□□□ 1.62
POLE-215ENST00000540987 CCDC88BA6NC98 1476 aa25.17■■□□□ 1.62
POLE-215ENST00000540987 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
POLE-215ENST00000540987 CEP164Q9UPV0 1460 aa25.16■■□□□ 1.62
POLE-215ENST00000540987 WDR62O43379 1518 aa25.15■■□□□ 1.62
POLE-215ENST00000540987 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
POLE-215ENST00000540987 URB2Q14146 1524 aaKnown RBP24.98■■□□□ 1.59
POLE-215ENST00000540987 DNAJC5Q9H3Z4 198 aa24.92■■□□□ 1.58
POLE-215ENST00000540987 TOPBP1Q92547 1522 aa24.76■■□□□ 1.55
POLE-215ENST00000540987 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
POLE-215ENST00000540987 DNMBPQ6XZF7 1577 aa24.72■■□□□ 1.55
POLE-215ENST00000540987 ABCC8Q09428 1581 aa24.65■■□□□ 1.54
POLE-215ENST00000540987 IFT140Q96RY7 1462 aa24.64■■□□□ 1.53
POLE-215ENST00000540987 ZNF608Q9ULD9 1512 aaPredicted RBP24.59■■□□□ 1.53
POLE-215ENST00000540987 TARBP1Q13395 1621 aaKnown RBP24.54■■□□□ 1.52
POLE-215ENST00000540987 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
POLE-215ENST00000540987 EIF4G3O43432 1585 aaKnown RBP24.51■■□□□ 1.51
POLE-215ENST00000540987 CUX1P39880 1505 aa24.51■■□□□ 1.51
POLE-215ENST00000540987 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
POLE-215ENST00000540987 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
POLE-215ENST00000540987 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.496e-7■■■■□ 23.9
POLE-215ENST00000540987 SOGA1O94964 1423 aa24.35■■□□□ 1.49
POLE-215ENST00000540987 WDR97A6NE52 1622 aa24.33■■□□□ 1.49
POLE-215ENST00000540987 OSCARQ8IYS5 282 aa24.27■■□□□ 1.48
POLE-215ENST00000540987 TDRD9Q8NDG6 1382 aaKnown RBP24.27■■□□□ 1.48
POLE-215ENST00000540987 CHD1O14646 1710 aa24.25■■□□□ 1.47
POLE-215ENST00000540987 BIVM-ERCC5R4GMW8 1640 aa24.24■■□□□ 1.47
POLE-215ENST00000540987 SYNJ1O43426 1573 aa24.23■■□□□ 1.47
POLE-215ENST00000540987 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
POLE-215ENST00000540987 WRNQ14191 1432 aaPredicted RBP eCLIP24.19■■□□□ 1.46
POLE-215ENST00000540987 ABCA10Q8WWZ4 1543 aa24.18■■□□□ 1.46
POLE-215ENST00000540987 SNAPC4Q5SXM2 1469 aa24.18■■□□□ 1.46
POLE-215ENST00000540987 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
POLE-215ENST00000540987 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
POLE-215ENST00000540987 GRIN2BQ13224 1484 aa24.13■■□□□ 1.45
POLE-215ENST00000540987 MAGI1Q96QZ7 1491 aaPredicted RBP24.11■■□□□ 1.45
POLE-215ENST00000540987 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
POLE-215ENST00000540987 RIMBP3CA6NJZ7 1639 aa24.08■■□□□ 1.45
POLE-215ENST00000540987 RIMBP3BA6NNM3 1639 aa24.08■■□□□ 1.45
POLE-215ENST00000540987 RIMBP3Q9UFD9 1639 aa24.08■■□□□ 1.45
POLE-215ENST00000540987 FBLN2P98095 1184 aa24.03■■□□□ 1.44
POLE-215ENST00000540987 ARHGEF11O15085 1522 aa24.03■■□□□ 1.44
POLE-215ENST00000540987 SYNJ2O15056 1496 aa24.01■■□□□ 1.43
POLE-215ENST00000540987 TRIM41Q8WV44 630 aa24■■□□□ 1.43
POLE-215ENST00000540987 CLASP1Q7Z460 1538 aa23.99■■□□□ 1.43
POLE-215ENST00000540987 ADAMTS12P58397 1594 aa23.95■■□□□ 1.43
POLE-215ENST00000540987 CHMP7Q8WUX9 453 aaPredicted RBP23.92■■□□□ 1.42
POLE-215ENST00000540987 ERICH3Q5RHP9 1530 aa23.88■■□□□ 1.41
POLE-215ENST00000540987 GRIN2AQ12879 1464 aa23.85■■□□□ 1.41
POLE-215ENST00000540987 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
POLE-215ENST00000540987 FHAD1B1AJZ9 1412 aa23.81■■□□□ 1.4
POLE-215ENST00000540987 CEP170Q5SW79 1584 aa23.79■■□□□ 1.4
POLE-215ENST00000540987 NUP160Q12769 1436 aa23.76■■□□□ 1.39
POLE-215ENST00000540987 CYB5RLQ6IPT4 315 aa23.69■■□□□ 1.38
POLE-215ENST00000540987 KIF27Q86VH2 1401 aa23.67■■□□□ 1.38
POLE-215ENST00000540987 SHROOM2Q13796 1616 aa23.65■■□□□ 1.38
POLE-215ENST00000540987 ERCC6L2Q5T890 1561 aa23.65■■□□□ 1.38
POLE-215ENST00000540987 CUL7Q14999 1698 aa23.63■■□□□ 1.37
POLE-215ENST00000540987 IGF1RP08069 1367 aa23.62■■□□□ 1.37
POLE-215ENST00000540987 RUSC2Q8N2Y8 1516 aa23.61■■□□□ 1.37
POLE-215ENST00000540987 CARMIL1Q5VZK9 1371 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms