RNA–Protein interactions for RNA: ENST00000540970.1

STRIP1-209, Transcript of striatin interacting protein 1, humanhuman

TSL 3

Gene STRIP1, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRIP1-209ENST00000540970 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
STRIP1-209ENST00000540970 ABCC9O60706 1549 aa27.59■■■□□ 2.01
STRIP1-209ENST00000540970 CCDC180Q9P1Z9 1646 aa27.56■■■□□ 2
STRIP1-209ENST00000540970 RB1CC1Q8TDY2 1594 aa26.27■■□□□ 1.8
STRIP1-209ENST00000540970 NACADO15069 1562 aa26.13■■□□□ 1.77
STRIP1-209ENST00000540970 DCAF8L2P0C7V8 631 aa26.05■■□□□ 1.76
STRIP1-209ENST00000540970 DNAJC5BQ9UF47 199 aa25.95■■□□□ 1.74
STRIP1-209ENST00000540970 MYO15BQ96JP2 1530 aa25.83■■□□□ 1.73
STRIP1-209ENST00000540970 PABPN1Q86U42 306 aaKnown RBP eCLIP25.75■■□□□ 1.71
STRIP1-209ENST00000540970 UNC13AQ9UPW8 1703 aa25.55■■□□□ 1.68
STRIP1-209ENST00000540970 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
STRIP1-209ENST00000540970 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
STRIP1-209ENST00000540970 DCAF1Q9Y4B6 1507 aa25.49■■□□□ 1.67
STRIP1-209ENST00000540970 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
STRIP1-209ENST00000540970 SCRIBQ14160 1630 aa25.11■■□□□ 1.61
STRIP1-209ENST00000540970 CC2D2AQ9P2K1 1620 aa24.9■■□□□ 1.58
STRIP1-209ENST00000540970 CECR2Q9BXF3 1484 aa24.88■■□□□ 1.57
STRIP1-209ENST00000540970 EIF4G1Q04637 1599 aaKnown RBP24.87■■□□□ 1.57
STRIP1-209ENST00000540970 NCAPD3P42695 1498 aa24.18■■□□□ 1.46
STRIP1-209ENST00000540970 ATAD2BQ9ULI0 1458 aa24.07■■□□□ 1.44
STRIP1-209ENST00000540970 SMARCA4P51532 1647 aa23.99■■□□□ 1.43
STRIP1-209ENST00000540970 SMARCA2P51531 1590 aa23.98■■□□□ 1.43
STRIP1-209ENST00000540970 HMGXB3Q12766 1538 aa23.93■■□□□ 1.42
STRIP1-209ENST00000540970 BAZ1AQ9NRL2 1556 aaPredicted RBP23.91■■□□□ 1.42
STRIP1-209ENST00000540970 DNAJC5Q9H3Z4 198 aa23.9■■□□□ 1.42
STRIP1-209ENST00000540970 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
STRIP1-209ENST00000540970 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
STRIP1-209ENST00000540970 PEG3Q9GZU2 1588 aa23.8■■□□□ 1.4
STRIP1-209ENST00000540970 CUX2O14529 1486 aa23.8■■□□□ 1.4
STRIP1-209ENST00000540970 MROH2BQ7Z745 1585 aa23.74■■□□□ 1.39
STRIP1-209ENST00000540970 NESP48681 1621 aa23.7■■□□□ 1.39
STRIP1-209ENST00000540970 LAMC3Q9Y6N6 1575 aa23.55■■□□□ 1.36
STRIP1-209ENST00000540970 PDS5BQ9NTI5 1447 aa23.48■■□□□ 1.35
STRIP1-209ENST00000540970 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
STRIP1-209ENST00000540970 THOC2Q8NI27 1593 aaKnown RBP23.41■■□□□ 1.34
STRIP1-209ENST00000540970 WIZO95785 1651 aa23.4■■□□□ 1.34
STRIP1-209ENST00000540970 RSF1Q96T23 1441 aaPredicted RBP23.31■■□□□ 1.32
STRIP1-209ENST00000540970 KIF21AQ7Z4S6 1674 aa23.31■■□□□ 1.32
STRIP1-209ENST00000540970 MRC2Q9UBG0 1479 aa23.22■■□□□ 1.31
STRIP1-209ENST00000540970 CFTRP13569 1480 aa23.17■■□□□ 1.3
STRIP1-209ENST00000540970 WDR62O43379 1518 aa23.14■■□□□ 1.3
STRIP1-209ENST00000540970 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.3
STRIP1-209ENST00000540970 CEP164Q9UPV0 1460 aa23.13■■□□□ 1.29
STRIP1-209ENST00000540970 FANCD2Q9BXW9 1451 aa23.12■■□□□ 1.29
STRIP1-209ENST00000540970 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
STRIP1-209ENST00000540970 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
STRIP1-209ENST00000540970 OSCARQ8IYS5 282 aa22.79■■□□□ 1.24
STRIP1-209ENST00000540970 PRDM2Q13029 1718 aa22.75■■□□□ 1.23
STRIP1-209ENST00000540970 TRIM41Q8WV44 630 aa22.72■■□□□ 1.23
STRIP1-209ENST00000540970 IFT140Q96RY7 1462 aa22.7■■□□□ 1.22
STRIP1-209ENST00000540970 ABCC8Q09428 1581 aa22.68■■□□□ 1.22
STRIP1-209ENST00000540970 TOPBP1Q92547 1522 aa22.68■■□□□ 1.22
STRIP1-209ENST00000540970 ZNF608Q9ULD9 1512 aaPredicted RBP22.63■■□□□ 1.21
STRIP1-209ENST00000540970 DNMBPQ6XZF7 1577 aa22.57■■□□□ 1.2
STRIP1-209ENST00000540970 AQRO60306 1485 aaKnown RBP eCLIP22.46■■□□□ 1.194e-6■■■■■ 31
STRIP1-209ENST00000540970 POLA1P09884 1462 aaPredicted RBP22.46■■□□□ 1.19
STRIP1-209ENST00000540970 TARBP1Q13395 1621 aaKnown RBP22.45■■□□□ 1.18
STRIP1-209ENST00000540970 EIF4G3O43432 1585 aaKnown RBP22.44■■□□□ 1.18
STRIP1-209ENST00000540970 SOGA1O94964 1423 aa22.4■■□□□ 1.18
STRIP1-209ENST00000540970 RAD54L2Q9Y4B4 1467 aa22.37■■□□□ 1.17
STRIP1-209ENST00000540970 TDRD9Q8NDG6 1382 aaKnown RBP22.35■■□□□ 1.17
STRIP1-209ENST00000540970 RIMBP3CA6NJZ7 1639 aa22.35■■□□□ 1.17
STRIP1-209ENST00000540970 RIMBP3BA6NNM3 1639 aa22.35■■□□□ 1.17
STRIP1-209ENST00000540970 RIMBP3Q9UFD9 1639 aa22.35■■□□□ 1.17
STRIP1-209ENST00000540970 FBLN2P98095 1184 aa22.32■■□□□ 1.16
STRIP1-209ENST00000540970 ARHGEF11O15085 1522 aa22.31■■□□□ 1.16
STRIP1-209ENST00000540970 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
STRIP1-209ENST00000540970 SUPT5HO00267 1087 aaKnown RBP22.3■■□□□ 1.16
STRIP1-209ENST00000540970 CUX1P39880 1505 aa22.29■■□□□ 1.16
STRIP1-209ENST00000540970 WDR97A6NE52 1622 aa22.24■■□□□ 1.15
STRIP1-209ENST00000540970 CYB5RLQ6IPT4 315 aa22.23■■□□□ 1.15
STRIP1-209ENST00000540970 CHD1O14646 1710 aa22.23■■□□□ 1.15
STRIP1-209ENST00000540970 CHMP7Q8WUX9 453 aaPredicted RBP22.2■■□□□ 1.14
STRIP1-209ENST00000540970 SNAPC4Q5SXM2 1469 aa22.2■■□□□ 1.14
STRIP1-209ENST00000540970 GRIN2BQ13224 1484 aa22.18■■□□□ 1.14
STRIP1-209ENST00000540970 MAGI1Q96QZ7 1491 aaPredicted RBP22.16■■□□□ 1.14
STRIP1-209ENST00000540970 ARAP1Q96P48 1450 aa22.11■■□□□ 1.13
STRIP1-209ENST00000540970 SYNJ2O15056 1496 aa22.09■■□□□ 1.13
STRIP1-209ENST00000540970 GAPVD1Q14C86 1478 aa22.09■■□□□ 1.13
STRIP1-209ENST00000540970 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
STRIP1-209ENST00000540970 CLASP1Q7Z460 1538 aa22.06■■□□□ 1.12
STRIP1-209ENST00000540970 SYNJ1O43426 1573 aa22.05■■□□□ 1.12
STRIP1-209ENST00000540970 WRNQ14191 1432 aaPredicted RBP eCLIP22.03■■□□□ 1.12
STRIP1-209ENST00000540970 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
STRIP1-209ENST00000540970 PBRM1Q86U86 1689 aa21.95■■□□□ 1.1
STRIP1-209ENST00000540970 TRHP20396 242 aaPredicted RBP21.95■■□□□ 1.1
STRIP1-209ENST00000540970 TOP2BQ02880 1626 aa21.93■■□□□ 1.1
STRIP1-209ENST00000540970 BIVM-ERCC5R4GMW8 1640 aa21.9■■□□□ 1.1
STRIP1-209ENST00000540970 GRIN2AQ12879 1464 aa21.87■■□□□ 1.09
STRIP1-209ENST00000540970 FHAD1B1AJZ9 1412 aa21.84■■□□□ 1.09
STRIP1-209ENST00000540970 NUP160Q12769 1436 aa21.82■■□□□ 1.08
STRIP1-209ENST00000540970 ADAMTS12P58397 1594 aa21.81■■□□□ 1.08
STRIP1-209ENST00000540970 ERICH3Q5RHP9 1530 aa21.8■■□□□ 1.08
STRIP1-209ENST00000540970 CEP170Q5SW79 1584 aa21.75■■□□□ 1.07
STRIP1-209ENST00000540970 ERCC6L2Q5T890 1561 aa21.7■■□□□ 1.06
STRIP1-209ENST00000540970 JPH4Q96JJ6 628 aa21.67■■□□□ 1.06
STRIP1-209ENST00000540970 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
STRIP1-209ENST00000540970 PRG4Q92954 1404 aaPredicted RBP21.61■■□□□ 1.05
STRIP1-209ENST00000540970 IGF1RP08069 1367 aa21.61■■□□□ 1.05
STRIP1-209ENST00000540970 KIF27Q86VH2 1401 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms