RNA–Protein interactions for RNA: ENST00000540886.1

AP003717.1-201, humanhuman

TSL 3

Gene AP003717.1, Length 371 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003717.1-201ENST00000540886 NISCHQ9Y2I1 1504 aa25.25■■□□□ 1.63
AP003717.1-201ENST00000540886 CCDC180Q9P1Z9 1646 aa22.33■■□□□ 1.17
AP003717.1-201ENST00000540886 ABCC9O60706 1549 aa22.01■■□□□ 1.11
AP003717.1-201ENST00000540886 ZCCHC6Q5VYS8 1495 aaKnown RBP21.12■□□□□ 0.97
AP003717.1-201ENST00000540886 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
AP003717.1-201ENST00000540886 DCAF8L2P0C7V8 631 aa20.97■□□□□ 0.95
AP003717.1-201ENST00000540886 DCAF1Q9Y4B6 1507 aa20.91■□□□□ 0.94
AP003717.1-201ENST00000540886 NACADO15069 1562 aa20.89■□□□□ 0.94
AP003717.1-201ENST00000540886 MYO15BQ96JP2 1530 aa20.87■□□□□ 0.93
AP003717.1-201ENST00000540886 DNAJC5BQ9UF47 199 aa20.6■□□□□ 0.89
AP003717.1-201ENST00000540886 UNC13AQ9UPW8 1703 aa20.59■□□□□ 0.89
AP003717.1-201ENST00000540886 PABPN1Q86U42 306 aaKnown RBP eCLIP20.44■□□□□ 0.86
AP003717.1-201ENST00000540886 BICRAQ9NZM4 1560 aa20.42■□□□□ 0.86
AP003717.1-201ENST00000540886 SCRIBQ14160 1630 aa20.42■□□□□ 0.86
AP003717.1-201ENST00000540886 SHROOM4Q9ULL8 1493 aa20.18■□□□□ 0.82
AP003717.1-201ENST00000540886 CC2D2AQ9P2K1 1620 aa19.92■□□□□ 0.78
AP003717.1-201ENST00000540886 EIF4G1Q04637 1599 aaKnown RBP19.89■□□□□ 0.77
AP003717.1-201ENST00000540886 CECR2Q9BXF3 1484 aa19.83■□□□□ 0.76
AP003717.1-201ENST00000540886 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
AP003717.1-201ENST00000540886 SMARCA4P51532 1647 aa19.54■□□□□ 0.72
AP003717.1-201ENST00000540886 MROH2BQ7Z745 1585 aa19.46■□□□□ 0.71
AP003717.1-201ENST00000540886 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
AP003717.1-201ENST00000540886 RSF1Q96T23 1441 aaPredicted RBP19.35■□□□□ 0.69
AP003717.1-201ENST00000540886 PEG3Q9GZU2 1588 aa19.32■□□□□ 0.68
AP003717.1-201ENST00000540886 ATAD2BQ9ULI0 1458 aa19.31■□□□□ 0.68
AP003717.1-201ENST00000540886 WIZO95785 1651 aa19.28■□□□□ 0.68
AP003717.1-201ENST00000540886 NCAPD3P42695 1498 aa19.24■□□□□ 0.67
AP003717.1-201ENST00000540886 HMGXB3Q12766 1538 aa19.22■□□□□ 0.67
AP003717.1-201ENST00000540886 BAZ1BQ9UIG0 1483 aaKnown RBP19.22■□□□□ 0.67
AP003717.1-201ENST00000540886 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
AP003717.1-201ENST00000540886 TOP2AP11388 1531 aaKnown RBP19.12■□□□□ 0.65
AP003717.1-201ENST00000540886 CUX2O14529 1486 aa18.99■□□□□ 0.63
AP003717.1-201ENST00000540886 ERCC6Q03468 1493 aa18.98■□□□□ 0.63
AP003717.1-201ENST00000540886 NESP48681 1621 aa18.92■□□□□ 0.62
AP003717.1-201ENST00000540886 DNAJC5Q9H3Z4 198 aa18.9■□□□□ 0.62
AP003717.1-201ENST00000540886 CCDC88BA6NC98 1476 aa18.86■□□□□ 0.61
AP003717.1-201ENST00000540886 LAMC3Q9Y6N6 1575 aa18.83■□□□□ 0.6
AP003717.1-201ENST00000540886 THOC2Q8NI27 1593 aaKnown RBP18.79■□□□□ 0.6
AP003717.1-201ENST00000540886 KIF21AQ7Z4S6 1674 aa18.74■□□□□ 0.59
AP003717.1-201ENST00000540886 CADPSQ9ULU8 1353 aa18.7■□□□□ 0.58
AP003717.1-201ENST00000540886 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
AP003717.1-201ENST00000540886 CFTRP13569 1480 aa18.67■□□□□ 0.58
AP003717.1-201ENST00000540886 PRDM2Q13029 1718 aa18.6■□□□□ 0.57
AP003717.1-201ENST00000540886 MRC2Q9UBG0 1479 aa18.53■□□□□ 0.56
AP003717.1-201ENST00000540886 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.55
AP003717.1-201ENST00000540886 WDR62O43379 1518 aa18.51■□□□□ 0.55
AP003717.1-201ENST00000540886 CEP164Q9UPV0 1460 aa18.49■□□□□ 0.55
AP003717.1-201ENST00000540886 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
AP003717.1-201ENST00000540886 URB2Q14146 1524 aaKnown RBP18.3■□□□□ 0.52
AP003717.1-201ENST00000540886 DNMBPQ6XZF7 1577 aa18.29■□□□□ 0.52
AP003717.1-201ENST00000540886 WRNQ14191 1432 aaPredicted RBP eCLIP18.28■□□□□ 0.52
AP003717.1-201ENST00000540886 TOPBP1Q92547 1522 aa18.25■□□□□ 0.51
AP003717.1-201ENST00000540886 CUX1P39880 1505 aa18.24■□□□□ 0.51
AP003717.1-201ENST00000540886 SYNJ1O43426 1573 aa18.21■□□□□ 0.51
AP003717.1-201ENST00000540886 TOP2BQ02880 1626 aa18.2■□□□□ 0.5
AP003717.1-201ENST00000540886 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
AP003717.1-201ENST00000540886 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.49
AP003717.1-201ENST00000540886 POLA1P09884 1462 aaPredicted RBP18.13■□□□□ 0.49
AP003717.1-201ENST00000540886 TRIM41Q8WV44 630 aa18.09■□□□□ 0.49
AP003717.1-201ENST00000540886 IFT140Q96RY7 1462 aa18.08■□□□□ 0.49
AP003717.1-201ENST00000540886 ZNF608Q9ULD9 1512 aaPredicted RBP18.06■□□□□ 0.48
AP003717.1-201ENST00000540886 SOGA1O94964 1423 aa18.06■□□□□ 0.48
AP003717.1-201ENST00000540886 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
AP003717.1-201ENST00000540886 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
AP003717.1-201ENST00000540886 RAD54L2Q9Y4B4 1467 aa18.02■□□□□ 0.48
AP003717.1-201ENST00000540886 TARBP1Q13395 1621 aaKnown RBP18.02■□□□□ 0.48
AP003717.1-201ENST00000540886 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
AP003717.1-201ENST00000540886 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
AP003717.1-201ENST00000540886 ABCA10Q8WWZ4 1543 aa17.98■□□□□ 0.47
AP003717.1-201ENST00000540886 RIMBP3CA6NJZ7 1639 aa17.9■□□□□ 0.46
AP003717.1-201ENST00000540886 RIMBP3BA6NNM3 1639 aa17.9■□□□□ 0.46
AP003717.1-201ENST00000540886 RIMBP3Q9UFD9 1639 aa17.9■□□□□ 0.46
AP003717.1-201ENST00000540886 TDRD9Q8NDG6 1382 aaKnown RBP17.9■□□□□ 0.46
AP003717.1-201ENST00000540886 ABCA5Q8WWZ7 1642 aa17.89■□□□□ 0.45
AP003717.1-201ENST00000540886 KIF27Q86VH2 1401 aa17.88■□□□□ 0.45
AP003717.1-201ENST00000540886 AQRO60306 1485 aaKnown RBP eCLIP17.88■□□□□ 0.45
AP003717.1-201ENST00000540886 CHD1O14646 1710 aa17.87■□□□□ 0.45
AP003717.1-201ENST00000540886 GAPVD1Q14C86 1478 aa17.87■□□□□ 0.45
AP003717.1-201ENST00000540886 ARHGEF11O15085 1522 aa17.83■□□□□ 0.45
AP003717.1-201ENST00000540886 PBRM1Q86U86 1689 aa17.83■□□□□ 0.44
AP003717.1-201ENST00000540886 GRIN2BQ13224 1484 aa17.82■□□□□ 0.44
AP003717.1-201ENST00000540886 ERICH3Q5RHP9 1530 aa17.78■□□□□ 0.44
AP003717.1-201ENST00000540886 EEA1Q15075 1411 aa17.78■□□□□ 0.44
AP003717.1-201ENST00000540886 RUSC2Q8N2Y8 1516 aa17.76■□□□□ 0.43
AP003717.1-201ENST00000540886 SNAPC4Q5SXM2 1469 aa17.75■□□□□ 0.43
AP003717.1-201ENST00000540886 MAGI1Q96QZ7 1491 aaPredicted RBP17.74■□□□□ 0.43
AP003717.1-201ENST00000540886 CUL7Q14999 1698 aa17.72■□□□□ 0.43
AP003717.1-201ENST00000540886 IGF1RP08069 1367 aa17.7■□□□□ 0.42
AP003717.1-201ENST00000540886 FAM9AQ8IZU1 332 aaPredicted RBP17.7■□□□□ 0.42
AP003717.1-201ENST00000540886 ADAMTS12P58397 1594 aa17.7■□□□□ 0.42
AP003717.1-201ENST00000540886 FBLN2P98095 1184 aa17.68■□□□□ 0.42
AP003717.1-201ENST00000540886 FHAD1B1AJZ9 1412 aa17.67■□□□□ 0.42
AP003717.1-201ENST00000540886 SYNJ2O15056 1496 aa17.66■□□□□ 0.42
AP003717.1-201ENST00000540886 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
AP003717.1-201ENST00000540886 CLASP1Q7Z460 1538 aa17.66■□□□□ 0.42
AP003717.1-201ENST00000540886 CSRNP3Q8WYN3 585 aa17.65■□□□□ 0.42
AP003717.1-201ENST00000540886 CARMIL1Q5VZK9 1371 aa17.64■□□□□ 0.41
AP003717.1-201ENST00000540886 CHMP7Q8WUX9 453 aaPredicted RBP17.62■□□□□ 0.41
AP003717.1-201ENST00000540886 CYB5RLQ6IPT4 315 aa17.61■□□□□ 0.41
AP003717.1-201ENST00000540886 RAPGEF2Q9Y4G8 1499 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms