RNA–Protein interactions for RNA: ENST00000540707.5

ARMC6-214, Transcript of armadillo repeat containing 6, humanhuman

TSL 4

Gene ARMC6, Length 557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARMC6-214ENST00000540707 NISCHQ9Y2I1 1504 aa42.71■■■■■ 4.43
ARMC6-214ENST00000540707 ABCC9O60706 1549 aa39.14■■■■□ 3.86
ARMC6-214ENST00000540707 CCDC180Q9P1Z9 1646 aa38.46■■■■□ 3.75
ARMC6-214ENST00000540707 DNAJC5BQ9UF47 199 aa37.35■■■■□ 3.57
ARMC6-214ENST00000540707 RB1CC1Q8TDY2 1594 aa36.95■■■■□ 3.51
ARMC6-214ENST00000540707 NACADO15069 1562 aa36.58■■■■□ 3.45
ARMC6-214ENST00000540707 PABPN1Q86U42 306 aaKnown RBP eCLIP36.43■■■■□ 3.42
ARMC6-214ENST00000540707 DCAF8L2P0C7V8 631 aa36.39■■■■□ 3.42
ARMC6-214ENST00000540707 UNC13AQ9UPW8 1703 aa36■■■■□ 3.35
ARMC6-214ENST00000540707 MYO15BQ96JP2 1530 aa35.93■■■■□ 3.34
ARMC6-214ENST00000540707 BICRAQ9NZM4 1560 aa35.92■■■■□ 3.34
ARMC6-214ENST00000540707 SHROOM4Q9ULL8 1493 aa35.37■■■■□ 3.25
ARMC6-214ENST00000540707 CECR2Q9BXF3 1484 aa35.33■■■■□ 3.25
ARMC6-214ENST00000540707 CC2D2AQ9P2K1 1620 aa35.28■■■■□ 3.24
ARMC6-214ENST00000540707 ZCCHC6Q5VYS8 1495 aaKnown RBP35.24■■■■□ 3.23
ARMC6-214ENST00000540707 DCAF1Q9Y4B6 1507 aa35.23■■■■□ 3.23
ARMC6-214ENST00000540707 EIF4G1Q04637 1599 aaKnown RBP35.07■■■■□ 3.2
ARMC6-214ENST00000540707 SCRIBQ14160 1630 aa35.03■■■■□ 3.2
ARMC6-214ENST00000540707 DNAJC5Q9H3Z4 198 aa34.71■■■■□ 3.15
ARMC6-214ENST00000540707 CUX2O14529 1486 aa33.96■■■■□ 3.03
ARMC6-214ENST00000540707 NCAPD3P42695 1498 aa33.85■■■■□ 3.01
ARMC6-214ENST00000540707 ERCC6Q03468 1493 aa33.81■■■■□ 3
ARMC6-214ENST00000540707 ATAD2BQ9ULI0 1458 aa33.63■■■□□ 2.97
ARMC6-214ENST00000540707 SMARCA2P51531 1590 aa33.46■■■□□ 2.95
ARMC6-214ENST00000540707 NESP48681 1621 aa33.46■■■□□ 2.95
ARMC6-214ENST00000540707 HMGXB3Q12766 1538 aa33.45■■■□□ 2.95
ARMC6-214ENST00000540707 SMARCA4P51532 1647 aa33.39■■■□□ 2.93
ARMC6-214ENST00000540707 BAZ1BQ9UIG0 1483 aaKnown RBP33.25■■■□□ 2.91
ARMC6-214ENST00000540707 BAZ1AQ9NRL2 1556 aaPredicted RBP33.16■■■□□ 2.9
ARMC6-214ENST00000540707 THOC2Q8NI27 1593 aaKnown RBP33.15■■■□□ 2.9
ARMC6-214ENST00000540707 PEG3Q9GZU2 1588 aa33.09■■■□□ 2.89
ARMC6-214ENST00000540707 LAMC3Q9Y6N6 1575 aa33.09■■■□□ 2.89
ARMC6-214ENST00000540707 PDS5BQ9NTI5 1447 aa32.99■■■□□ 2.87
ARMC6-214ENST00000540707 MROH2BQ7Z745 1585 aa32.91■■■□□ 2.86
ARMC6-214ENST00000540707 KIF21AQ7Z4S6 1674 aa32.89■■■□□ 2.86
ARMC6-214ENST00000540707 TRIM41Q8WV44 630 aa32.89■■■□□ 2.86
ARMC6-214ENST00000540707 CADPSQ9ULU8 1353 aa32.81■■■□□ 2.84
ARMC6-214ENST00000540707 MRC2Q9UBG0 1479 aa32.7■■■□□ 2.83
ARMC6-214ENST00000540707 WDR62O43379 1518 aa32.61■■■□□ 2.81
ARMC6-214ENST00000540707 CEP164Q9UPV0 1460 aa32.43■■■□□ 2.78
ARMC6-214ENST00000540707 OSCARQ8IYS5 282 aa32.42■■■□□ 2.78
ARMC6-214ENST00000540707 WIZO95785 1651 aa32.42■■■□□ 2.78
ARMC6-214ENST00000540707 FANCD2Q9BXW9 1451 aa32.37■■■□□ 2.77
ARMC6-214ENST00000540707 CFTRP13569 1480 aa32.28■■■□□ 2.76
ARMC6-214ENST00000540707 URB2Q14146 1524 aaKnown RBP32.15■■■□□ 2.74
ARMC6-214ENST00000540707 RSF1Q96T23 1441 aaPredicted RBP32.06■■■□□ 2.72
ARMC6-214ENST00000540707 TOP2AP11388 1531 aaKnown RBP31.99■■■□□ 2.71
ARMC6-214ENST00000540707 RIMBP3CA6NJZ7 1639 aa31.91■■■□□ 2.7
ARMC6-214ENST00000540707 RIMBP3BA6NNM3 1639 aa31.91■■■□□ 2.7
ARMC6-214ENST00000540707 RIMBP3Q9UFD9 1639 aa31.91■■■□□ 2.7
ARMC6-214ENST00000540707 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
ARMC6-214ENST00000540707 IFT140Q96RY7 1462 aa31.84■■■□□ 2.69
ARMC6-214ENST00000540707 ARHGEF11O15085 1522 aa31.78■■■□□ 2.68
ARMC6-214ENST00000540707 CCDC88BA6NC98 1476 aa31.71■■■□□ 2.67
ARMC6-214ENST00000540707 TOPBP1Q92547 1522 aa31.7■■■□□ 2.66
ARMC6-214ENST00000540707 PRDM2Q13029 1718 aa31.69■■■□□ 2.66
ARMC6-214ENST00000540707 CYB5RLQ6IPT4 315 aa31.69■■■□□ 2.66
ARMC6-214ENST00000540707 ABCC8Q09428 1581 aa31.6■■■□□ 2.65
ARMC6-214ENST00000540707 EIF4G3O43432 1585 aaKnown RBP31.56■■■□□ 2.64
ARMC6-214ENST00000540707 AQRO60306 1485 aaKnown RBP eCLIP31.53■■■□□ 2.645e-6■■■□□ 16.9
ARMC6-214ENST00000540707 TRHP20396 242 aaPredicted RBP31.5■■■□□ 2.63
ARMC6-214ENST00000540707 DNMBPQ6XZF7 1577 aa31.49■■■□□ 2.63
ARMC6-214ENST00000540707 FBLN2P98095 1184 aa31.46■■■□□ 2.63
ARMC6-214ENST00000540707 ARAP1Q96P48 1450 aa31.44■■■□□ 2.62
ARMC6-214ENST00000540707 TARBP1Q13395 1621 aaKnown RBP31.42■■■□□ 2.62
ARMC6-214ENST00000540707 CHD1O14646 1710 aa31.39■■■□□ 2.62
ARMC6-214ENST00000540707 POLA1P09884 1462 aaPredicted RBP31.33■■■□□ 2.61
ARMC6-214ENST00000540707 TDRD9Q8NDG6 1382 aaKnown RBP31.26■■■□□ 2.59
ARMC6-214ENST00000540707 RAD54L2Q9Y4B4 1467 aa31.26■■■□□ 2.59
ARMC6-214ENST00000540707 SOGA1O94964 1423 aa31.24■■■□□ 2.59
ARMC6-214ENST00000540707 CHMP7Q8WUX9 453 aaPredicted RBP31.14■■■□□ 2.58
ARMC6-214ENST00000540707 SNAPC4Q5SXM2 1469 aa31.13■■■□□ 2.57
ARMC6-214ENST00000540707 CLASP1Q7Z460 1538 aa31.1■■■□□ 2.57
ARMC6-214ENST00000540707 FGD5Q6ZNL6 1462 aa31.05■■■□□ 2.56
ARMC6-214ENST00000540707 WDR97A6NE52 1622 aa31.04■■■□□ 2.56
ARMC6-214ENST00000540707 MAGI1Q96QZ7 1491 aaPredicted RBP31.03■■■□□ 2.56
ARMC6-214ENST00000540707 SYNJ1O43426 1573 aa31.02■■■□□ 2.56
ARMC6-214ENST00000540707 AEBP2Q6ZN18 517 aaPredicted RBP30.99■■■□□ 2.55
ARMC6-214ENST00000540707 GRIN2BQ13224 1484 aa30.99■■■□□ 2.55
ARMC6-214ENST00000540707 SYNJ2O15056 1496 aa30.95■■■□□ 2.54
ARMC6-214ENST00000540707 CUX1P39880 1505 aa30.93■■■□□ 2.54
ARMC6-214ENST00000540707 GAPVD1Q14C86 1478 aa30.85■■■□□ 2.53
ARMC6-214ENST00000540707 PBRM1Q86U86 1689 aa30.68■■■□□ 2.5
ARMC6-214ENST00000540707 ABCA10Q8WWZ4 1543 aa30.68■■■□□ 2.5
ARMC6-214ENST00000540707 ABCA5Q8WWZ7 1642 aa30.62■■■□□ 2.49
ARMC6-214ENST00000540707 ERCC6L2Q5T890 1561 aa30.6■■■□□ 2.49
ARMC6-214ENST00000540707 GRIN2AQ12879 1464 aa30.57■■■□□ 2.48
ARMC6-214ENST00000540707 NUP160Q12769 1436 aa30.52■■■□□ 2.48
ARMC6-214ENST00000540707 CEP170Q5SW79 1584 aa30.49■■■□□ 2.47
ARMC6-214ENST00000540707 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.47
ARMC6-214ENST00000540707 ADAMTS12P58397 1594 aa30.42■■■□□ 2.46
ARMC6-214ENST00000540707 FHAD1B1AJZ9 1412 aa30.4■■■□□ 2.46
ARMC6-214ENST00000540707 SHROOM2Q13796 1616 aa30.38■■■□□ 2.45
ARMC6-214ENST00000540707 PRG4Q92954 1404 aaPredicted RBP30.29■■■□□ 2.44
ARMC6-214ENST00000540707 JPH4Q96JJ6 628 aa30.28■■■□□ 2.44
ARMC6-214ENST00000540707 ERICH3Q5RHP9 1530 aa30.26■■■□□ 2.43
ARMC6-214ENST00000540707 TOP2BQ02880 1626 aa30.25■■■□□ 2.43
ARMC6-214ENST00000540707 KIF13AQ9H1H9 1805 aa30.24■■■□□ 2.43
ARMC6-214ENST00000540707 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
ARMC6-214ENST00000540707 BIVM-ERCC5R4GMW8 1640 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms