RNA–Protein interactions for RNA: ENST00000540688.1

NDUFA9-206, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 2 BASIC

Gene NDUFA9, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-206ENST00000540688 NISCHQ9Y2I1 1504 aa26.55■■□□□ 1.84
NDUFA9-206ENST00000540688 ABCC9O60706 1549 aa23.74■■□□□ 1.39
NDUFA9-206ENST00000540688 CCDC180Q9P1Z9 1646 aa23.74■■□□□ 1.39
NDUFA9-206ENST00000540688 RB1CC1Q8TDY2 1594 aa22.64■■□□□ 1.22
NDUFA9-206ENST00000540688 DCAF8L2P0C7V8 631 aa22.64■■□□□ 1.21
NDUFA9-206ENST00000540688 NACADO15069 1562 aa22.48■■□□□ 1.19
NDUFA9-206ENST00000540688 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
NDUFA9-206ENST00000540688 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
NDUFA9-206ENST00000540688 DNAJC5BQ9UF47 199 aa22.1■■□□□ 1.13
NDUFA9-206ENST00000540688 ZCCHC6Q5VYS8 1495 aaKnown RBP21.99■■□□□ 1.11
NDUFA9-206ENST00000540688 UNC13AQ9UPW8 1703 aa21.96■■□□□ 1.11
NDUFA9-206ENST00000540688 DCAF1Q9Y4B6 1507 aa21.9■■□□□ 1.1
NDUFA9-206ENST00000540688 BICRAQ9NZM4 1560 aa21.83■■□□□ 1.09
NDUFA9-206ENST00000540688 SCRIBQ14160 1630 aa21.7■■□□□ 1.06
NDUFA9-206ENST00000540688 SHROOM4Q9ULL8 1493 aa21.65■■□□□ 1.06
NDUFA9-206ENST00000540688 CC2D2AQ9P2K1 1620 aa21.39■■□□□ 1.01
NDUFA9-206ENST00000540688 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.01
NDUFA9-206ENST00000540688 EIF4G1Q04637 1599 aaKnown RBP21.37■■□□□ 1.01
NDUFA9-206ENST00000540688 NCAPD3P42695 1498 aa20.74■□□□□ 0.91
NDUFA9-206ENST00000540688 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
NDUFA9-206ENST00000540688 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
NDUFA9-206ENST00000540688 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
NDUFA9-206ENST00000540688 BAZ1AQ9NRL2 1556 aaPredicted RBP20.64■□□□□ 0.9
NDUFA9-206ENST00000540688 ERCC6Q03468 1493 aa20.59■□□□□ 0.89
NDUFA9-206ENST00000540688 HMGXB3Q12766 1538 aa20.58■□□□□ 0.88
NDUFA9-206ENST00000540688 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
NDUFA9-206ENST00000540688 DNAJC5Q9H3Z4 198 aa20.51■□□□□ 0.87
NDUFA9-206ENST00000540688 MROH2BQ7Z745 1585 aa20.44■□□□□ 0.86
NDUFA9-206ENST00000540688 PEG3Q9GZU2 1588 aa20.42■□□□□ 0.86
NDUFA9-206ENST00000540688 CUX2O14529 1486 aa20.42■□□□□ 0.86
NDUFA9-206ENST00000540688 NESP48681 1621 aa20.37■□□□□ 0.85
NDUFA9-206ENST00000540688 LAMC3Q9Y6N6 1575 aa20.28■□□□□ 0.84
NDUFA9-206ENST00000540688 PDS5BQ9NTI5 1447 aa20.25■□□□□ 0.83
NDUFA9-206ENST00000540688 WIZO95785 1651 aa20.19■□□□□ 0.82
NDUFA9-206ENST00000540688 CADPSQ9ULU8 1353 aa20.17■□□□□ 0.82
NDUFA9-206ENST00000540688 RSF1Q96T23 1441 aaPredicted RBP20.09■□□□□ 0.81
NDUFA9-206ENST00000540688 THOC2Q8NI27 1593 aaKnown RBP20.08■□□□□ 0.81
NDUFA9-206ENST00000540688 KIF21AQ7Z4S6 1674 aa20.08■□□□□ 0.81
NDUFA9-206ENST00000540688 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
NDUFA9-206ENST00000540688 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
NDUFA9-206ENST00000540688 CEP164Q9UPV0 1460 aa19.97■□□□□ 0.79
NDUFA9-206ENST00000540688 FANCD2Q9BXW9 1451 aa19.93■□□□□ 0.78
NDUFA9-206ENST00000540688 CFTRP13569 1480 aa19.91■□□□□ 0.78
NDUFA9-206ENST00000540688 WDR62O43379 1518 aa19.87■□□□□ 0.77
NDUFA9-206ENST00000540688 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
NDUFA9-206ENST00000540688 URB2Q14146 1524 aaKnown RBP19.7■□□□□ 0.74
NDUFA9-206ENST00000540688 PRDM2Q13029 1718 aa19.65■□□□□ 0.74
NDUFA9-206ENST00000540688 OSCARQ8IYS5 282 aa19.62■□□□□ 0.73
NDUFA9-206ENST00000540688 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
NDUFA9-206ENST00000540688 ABCC8Q09428 1581 aa19.58■□□□□ 0.73
NDUFA9-206ENST00000540688 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
NDUFA9-206ENST00000540688 TOPBP1Q92547 1522 aa19.53■□□□□ 0.72
NDUFA9-206ENST00000540688 SUPT5HO00267 1087 aaKnown RBP19.47■□□□□ 0.71
NDUFA9-206ENST00000540688 DNMBPQ6XZF7 1577 aa19.47■□□□□ 0.71
NDUFA9-206ENST00000540688 ZNF608Q9ULD9 1512 aaPredicted RBP19.45■□□□□ 0.7
NDUFA9-206ENST00000540688 FBLN2P98095 1184 aa19.37■□□□□ 0.69
NDUFA9-206ENST00000540688 EIF4G3O43432 1585 aaKnown RBP19.34■□□□□ 0.69
NDUFA9-206ENST00000540688 AQRO60306 1485 aaKnown RBP eCLIP19.34■□□□□ 0.69
NDUFA9-206ENST00000540688 SOGA1O94964 1423 aa19.34■□□□□ 0.69
NDUFA9-206ENST00000540688 POLA1P09884 1462 aaPredicted RBP19.33■□□□□ 0.68
NDUFA9-206ENST00000540688 TARBP1Q13395 1621 aaKnown RBP19.29■□□□□ 0.68
NDUFA9-206ENST00000540688 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
NDUFA9-206ENST00000540688 TDRD9Q8NDG6 1382 aaKnown RBP19.27■□□□□ 0.68
NDUFA9-206ENST00000540688 FGD5Q6ZNL6 1462 aa19.24■□□□□ 0.67
NDUFA9-206ENST00000540688 CHMP7Q8WUX9 453 aaPredicted RBP19.21■□□□□ 0.67
NDUFA9-206ENST00000540688 CUX1P39880 1505 aa19.2■□□□□ 0.66
NDUFA9-206ENST00000540688 RIMBP3CA6NJZ7 1639 aa19.19■□□□□ 0.66
NDUFA9-206ENST00000540688 RIMBP3BA6NNM3 1639 aa19.19■□□□□ 0.66
NDUFA9-206ENST00000540688 RIMBP3Q9UFD9 1639 aa19.19■□□□□ 0.66
NDUFA9-206ENST00000540688 CHD1O14646 1710 aa19.17■□□□□ 0.66
NDUFA9-206ENST00000540688 ARHGEF11O15085 1522 aa19.16■□□□□ 0.66
NDUFA9-206ENST00000540688 WDR97A6NE52 1622 aa19.15■□□□□ 0.66
NDUFA9-206ENST00000540688 CYB5RLQ6IPT4 315 aa19.15■□□□□ 0.66
NDUFA9-206ENST00000540688 SNAPC4Q5SXM2 1469 aa19.14■□□□□ 0.65
NDUFA9-206ENST00000540688 GRIN2BQ13224 1484 aa19.13■□□□□ 0.65
NDUFA9-206ENST00000540688 MAGI1Q96QZ7 1491 aaPredicted RBP19.1■□□□□ 0.65
NDUFA9-206ENST00000540688 GAPVD1Q14C86 1478 aa19.08■□□□□ 0.64
NDUFA9-206ENST00000540688 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
NDUFA9-206ENST00000540688 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
NDUFA9-206ENST00000540688 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
NDUFA9-206ENST00000540688 ABCA10Q8WWZ4 1543 aa19.02■□□□□ 0.64
NDUFA9-206ENST00000540688 TRHP20396 242 aaPredicted RBP19■□□□□ 0.63
NDUFA9-206ENST00000540688 PBRM1Q86U86 1689 aa18.98■□□□□ 0.63
NDUFA9-206ENST00000540688 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
NDUFA9-206ENST00000540688 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
NDUFA9-206ENST00000540688 CLASP1Q7Z460 1538 aa18.93■□□□□ 0.62
NDUFA9-206ENST00000540688 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
NDUFA9-206ENST00000540688 BIVM-ERCC5R4GMW8 1640 aa18.9■□□□□ 0.62
NDUFA9-206ENST00000540688 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
NDUFA9-206ENST00000540688 FHAD1B1AJZ9 1412 aa18.84■□□□□ 0.61
NDUFA9-206ENST00000540688 ADAMTS12P58397 1594 aa18.81■□□□□ 0.6
NDUFA9-206ENST00000540688 ERICH3Q5RHP9 1530 aa18.8■□□□□ 0.6
NDUFA9-206ENST00000540688 NUP160Q12769 1436 aa18.74■□□□□ 0.59
NDUFA9-206ENST00000540688 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
NDUFA9-206ENST00000540688 KIF27Q86VH2 1401 aa18.68■□□□□ 0.58
NDUFA9-206ENST00000540688 JPH4Q96JJ6 628 aa18.68■□□□□ 0.58
NDUFA9-206ENST00000540688 PRG4Q92954 1404 aaPredicted RBP18.65■□□□□ 0.58
NDUFA9-206ENST00000540688 ERCC6L2Q5T890 1561 aa18.63■□□□□ 0.57
NDUFA9-206ENST00000540688 IGF1RP08069 1367 aa18.6■□□□□ 0.57
NDUFA9-206ENST00000540688 NPM1P06748 294 aaKnown RBP eCLIP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms