RNA–Protein interactions for RNA: ENST00000540619.5

LINC02443-203, Transcript of long intergenic non-protein coding RNA 2443, humanhuman

TSL 2

Gene LINC02443, Length 626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02443-203ENST00000540619 NISCHQ9Y2I1 1504 aa15.37■□□□□ 0.05
LINC02443-203ENST00000540619 CCDC180Q9P1Z9 1646 aa13.49□□□□□ -0.25
LINC02443-203ENST00000540619 ABCC9O60706 1549 aa12.94□□□□□ -0.34
LINC02443-203ENST00000540619 ZCCHC6Q5VYS8 1495 aaKnown RBP12.85□□□□□ -0.35
LINC02443-203ENST00000540619 DCAF8L2P0C7V8 631 aa12.74□□□□□ -0.37
LINC02443-203ENST00000540619 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
LINC02443-203ENST00000540619 MYO15BQ96JP2 1530 aa12.67□□□□□ -0.38
LINC02443-203ENST00000540619 NACADO15069 1562 aa12.64□□□□□ -0.39
LINC02443-203ENST00000540619 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
LINC02443-203ENST00000540619 SCRIBQ14160 1630 aa12.34□□□□□ -0.43
LINC02443-203ENST00000540619 SHROOM4Q9ULL8 1493 aa12.32□□□□□ -0.44
LINC02443-203ENST00000540619 UNC13AQ9UPW8 1703 aa12.29□□□□□ -0.44
LINC02443-203ENST00000540619 BICRAQ9NZM4 1560 aa12.2□□□□□ -0.46
LINC02443-203ENST00000540619 PABPN1Q86U42 306 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC02443-203ENST00000540619 CECR2Q9BXF3 1484 aa11.95□□□□□ -0.5
LINC02443-203ENST00000540619 BAZ1AQ9NRL2 1556 aaPredicted RBP11.88□□□□□ -0.51
LINC02443-203ENST00000540619 MROH2BQ7Z745 1585 aa11.85□□□□□ -0.51
LINC02443-203ENST00000540619 EIF4G1Q04637 1599 aaKnown RBP11.84□□□□□ -0.51
LINC02443-203ENST00000540619 SMARCA4P51532 1647 aa11.84□□□□□ -0.51
LINC02443-203ENST00000540619 RSF1Q96T23 1441 aaPredicted RBP11.84□□□□□ -0.51
LINC02443-203ENST00000540619 SUPT5HO00267 1087 aaKnown RBP11.77□□□□□ -0.53
LINC02443-203ENST00000540619 PEG3Q9GZU2 1588 aa11.74□□□□□ -0.53
LINC02443-203ENST00000540619 WIZO95785 1651 aa11.73□□□□□ -0.53
LINC02443-203ENST00000540619 ATAD2BQ9ULI0 1458 aa11.73□□□□□ -0.53
LINC02443-203ENST00000540619 CC2D2AQ9P2K1 1620 aa11.72□□□□□ -0.53
LINC02443-203ENST00000540619 SMARCA2P51531 1590 aa11.7□□□□□ -0.54
LINC02443-203ENST00000540619 NCAPD3P42695 1498 aa11.68□□□□□ -0.54
LINC02443-203ENST00000540619 DNAJC5BQ9UF47 199 aa11.67□□□□□ -0.54
LINC02443-203ENST00000540619 BAZ1BQ9UIG0 1483 aaKnown RBP11.63□□□□□ -0.55
LINC02443-203ENST00000540619 TOP2AP11388 1531 aaKnown RBP11.61□□□□□ -0.55
LINC02443-203ENST00000540619 HMGXB3Q12766 1538 aa11.61□□□□□ -0.55
LINC02443-203ENST00000540619 CCDC88BA6NC98 1476 aa11.51□□□□□ -0.57
LINC02443-203ENST00000540619 CADPSQ9ULU8 1353 aa11.36□□□□□ -0.59
LINC02443-203ENST00000540619 CFTRP13569 1480 aa11.35□□□□□ -0.59
LINC02443-203ENST00000540619 NESP48681 1621 aa11.3□□□□□ -0.6
LINC02443-203ENST00000540619 LAMC3Q9Y6N6 1575 aa11.29□□□□□ -0.6
LINC02443-203ENST00000540619 PRDM2Q13029 1718 aa11.23□□□□□ -0.61
LINC02443-203ENST00000540619 PDS5BQ9NTI5 1447 aa11.22□□□□□ -0.61
LINC02443-203ENST00000540619 FANCD2Q9BXW9 1451 aa11.21□□□□□ -0.61
LINC02443-203ENST00000540619 CHIC1Q5VXU3 224 aa11.18□□□□□ -0.62
LINC02443-203ENST00000540619 ABCC8Q09428 1581 aa11.16□□□□□ -0.62
LINC02443-203ENST00000540619 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.62
LINC02443-203ENST00000540619 CEP164Q9UPV0 1460 aa11.15□□□□□ -0.62
LINC02443-203ENST00000540619 WRNQ14191 1432 aaPredicted RBP eCLIP11.13□□□□□ -0.63
LINC02443-203ENST00000540619 ERCC6Q03468 1493 aa11.12□□□□□ -0.63
LINC02443-203ENST00000540619 TRIM41Q8WV44 630 aa11.1□□□□□ -0.63
LINC02443-203ENST00000540619 CUX1P39880 1505 aa11.09□□□□□ -0.63
LINC02443-203ENST00000540619 URB2Q14146 1524 aaKnown RBP11.09□□□□□ -0.63
LINC02443-203ENST00000540619 SYNJ1O43426 1573 aa11.08□□□□□ -0.64
LINC02443-203ENST00000540619 MRC2Q9UBG0 1479 aa11.08□□□□□ -0.64
LINC02443-203ENST00000540619 TOPBP1Q92547 1522 aa11.07□□□□□ -0.64
LINC02443-203ENST00000540619 DNMBPQ6XZF7 1577 aa11.07□□□□□ -0.64
LINC02443-203ENST00000540619 TOP2BQ02880 1626 aa11.06□□□□□ -0.64
LINC02443-203ENST00000540619 BIVM-ERCC5R4GMW8 1640 aa11.06□□□□□ -0.64
LINC02443-203ENST00000540619 WDR62O43379 1518 aa11.04□□□□□ -0.64
LINC02443-203ENST00000540619 THOC2Q8NI27 1593 aaKnown RBP11.03□□□□□ -0.64
LINC02443-203ENST00000540619 FGD5Q6ZNL6 1462 aa11□□□□□ -0.65
LINC02443-203ENST00000540619 POLA1P09884 1462 aaPredicted RBP10.99□□□□□ -0.65
LINC02443-203ENST00000540619 CUX2O14529 1486 aa10.96□□□□□ -0.65
LINC02443-203ENST00000540619 SOGA1O94964 1423 aa10.96□□□□□ -0.65
LINC02443-203ENST00000540619 RAD54L2Q9Y4B4 1467 aa10.95□□□□□ -0.66
LINC02443-203ENST00000540619 IFT140Q96RY7 1462 aa10.93□□□□□ -0.66
LINC02443-203ENST00000540619 ABCA10Q8WWZ4 1543 aa10.92□□□□□ -0.66
LINC02443-203ENST00000540619 TARBP1Q13395 1621 aaKnown RBP10.91□□□□□ -0.66
LINC02443-203ENST00000540619 RUSC2Q8N2Y8 1516 aa10.89□□□□□ -0.67
LINC02443-203ENST00000540619 KIF27Q86VH2 1401 aa10.88□□□□□ -0.67
LINC02443-203ENST00000540619 TDRD9Q8NDG6 1382 aaKnown RBP10.88□□□□□ -0.67
LINC02443-203ENST00000540619 WDR97A6NE52 1622 aa10.87□□□□□ -0.67
LINC02443-203ENST00000540619 EEA1Q15075 1411 aa10.86□□□□□ -0.67
LINC02443-203ENST00000540619 ZNF608Q9ULD9 1512 aaPredicted RBP10.86□□□□□ -0.67
LINC02443-203ENST00000540619 FAM9AQ8IZU1 332 aaPredicted RBP10.86□□□□□ -0.67
LINC02443-203ENST00000540619 CSRNP3Q8WYN3 585 aa10.84□□□□□ -0.67
LINC02443-203ENST00000540619 AQRO60306 1485 aaKnown RBP eCLIP10.84□□□□□ -0.67
LINC02443-203ENST00000540619 GAPVD1Q14C86 1478 aa10.83□□□□□ -0.68
LINC02443-203ENST00000540619 IGF1RP08069 1367 aa10.83□□□□□ -0.68
LINC02443-203ENST00000540619 ABCA5Q8WWZ7 1642 aa10.83□□□□□ -0.68
LINC02443-203ENST00000540619 EIF4G3O43432 1585 aaKnown RBP10.79□□□□□ -0.68
LINC02443-203ENST00000540619 GRIN2BQ13224 1484 aa10.79□□□□□ -0.68
LINC02443-203ENST00000540619 ERICH3Q5RHP9 1530 aa10.79□□□□□ -0.68
LINC02443-203ENST00000540619 PRXQ9BXM0 1461 aa10.76□□□□□ -0.69
LINC02443-203ENST00000540619 CARMIL1Q5VZK9 1371 aa10.76□□□□□ -0.69
LINC02443-203ENST00000540619 PBRM1Q86U86 1689 aa10.76□□□□□ -0.69
LINC02443-203ENST00000540619 LOC105371045A0A1W2PR82 267 aa10.73□□□□□ -0.69
LINC02443-203ENST00000540619 SNAPC4Q5SXM2 1469 aa10.73□□□□□ -0.69
LINC02443-203ENST00000540619 FHAD1B1AJZ9 1412 aa10.72□□□□□ -0.69
LINC02443-203ENST00000540619 MAGI1Q96QZ7 1491 aaPredicted RBP10.72□□□□□ -0.69
LINC02443-203ENST00000540619 KIF21BO75037 1637 aa10.72□□□□□ -0.69
LINC02443-203ENST00000540619 CUL7Q14999 1698 aa10.72□□□□□ -0.69
LINC02443-203ENST00000540619 RAPGEF2Q9Y4G8 1499 aa10.71□□□□□ -0.69
LINC02443-203ENST00000540619 ADAMTS12P58397 1594 aa10.7□□□□□ -0.7
LINC02443-203ENST00000540619 EHMT2Q96KQ7 1210 aa10.69□□□□□ -0.7
LINC02443-203ENST00000540619 GOLGA3Q08378 1498 aa10.68□□□□□ -0.7
LINC02443-203ENST00000540619 SYNJ2O15056 1496 aa10.68□□□□□ -0.7
LINC02443-203ENST00000540619 CHMP7Q8WUX9 453 aaPredicted RBP10.67□□□□□ -0.7
LINC02443-203ENST00000540619 UBTFP17480 764 aaKnown RBP10.65□□□□□ -0.7
LINC02443-203ENST00000540619 GRIN2AQ12879 1464 aa10.64□□□□□ -0.71
LINC02443-203ENST00000540619 FBLN2P98095 1184 aa10.64□□□□□ -0.71
LINC02443-203ENST00000540619 TNIKQ9UKE5 1360 aa10.64□□□□□ -0.71
LINC02443-203ENST00000540619 CHD1O14646 1710 aa10.6□□□□□ -0.71
LINC02443-203ENST00000540619 NUP160Q12769 1436 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms