RNA–Protein interactions for RNA: ENST00000540583.5

APOLD1-204, Transcript of apolipoprotein L domain containing 1, humanhuman

TSL 4

Gene APOLD1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOLD1-204ENST00000540583 NISCHQ9Y2I1 1504 aa53.23■■■■■ 6.11
APOLD1-204ENST00000540583 CCDC180Q9P1Z9 1646 aa47.49■■■■■ 5.19
APOLD1-204ENST00000540583 ABCC9O60706 1549 aa46.94■■■■■ 5.1
APOLD1-204ENST00000540583 RB1CC1Q8TDY2 1594 aa44.94■■■■■ 4.79
APOLD1-204ENST00000540583 DCAF8L2P0C7V8 631 aa44.85■■■■■ 4.77
APOLD1-204ENST00000540583 NACADO15069 1562 aa44.77■■■■■ 4.76
APOLD1-204ENST00000540583 MYO15BQ96JP2 1530 aa44.3■■■■■ 4.68
APOLD1-204ENST00000540583 ZCCHC6Q5VYS8 1495 aaKnown RBP44.23■■■■■ 4.67
APOLD1-204ENST00000540583 DCAF1Q9Y4B6 1507 aa43.98■■■■■ 4.63
APOLD1-204ENST00000540583 UNC13AQ9UPW8 1703 aa43.87■■■■■ 4.61
APOLD1-204ENST00000540583 PABPN1Q86U42 306 aaKnown RBP eCLIP43.82■■■■■ 4.61
APOLD1-204ENST00000540583 BICRAQ9NZM4 1560 aa43.52■■■■■ 4.56
APOLD1-204ENST00000540583 DNAJC5BQ9UF47 199 aa43.39■■■■■ 4.54
APOLD1-204ENST00000540583 SCRIBQ14160 1630 aa43.37■■■■■ 4.53
APOLD1-204ENST00000540583 SHROOM4Q9ULL8 1493 aa43.04■■■■■ 4.48
APOLD1-204ENST00000540583 EIF4G1Q04637 1599 aaKnown RBP42.45■■■■■ 4.39
APOLD1-204ENST00000540583 CC2D2AQ9P2K1 1620 aa42.4■■■■■ 4.38
APOLD1-204ENST00000540583 CECR2Q9BXF3 1484 aa42.21■■■■■ 4.35
APOLD1-204ENST00000540583 SMARCA4P51532 1647 aa41.4■■■■■ 4.22
APOLD1-204ENST00000540583 BAZ1AQ9NRL2 1556 aaPredicted RBP41.31■■■■■ 4.2
APOLD1-204ENST00000540583 NCAPD3P42695 1498 aa41.29■■■■■ 4.2
APOLD1-204ENST00000540583 ATAD2BQ9ULI0 1458 aa41.28■■■■■ 4.2
APOLD1-204ENST00000540583 SMARCA2P51531 1590 aa41.23■■■■■ 4.19
APOLD1-204ENST00000540583 HMGXB3Q12766 1538 aa41.05■■■■■ 4.16
APOLD1-204ENST00000540583 MROH2BQ7Z745 1585 aa41.02■■■■■ 4.16
APOLD1-204ENST00000540583 BAZ1BQ9UIG0 1483 aaKnown RBP40.96■■■■■ 4.15
APOLD1-204ENST00000540583 PEG3Q9GZU2 1588 aa40.94■■■■■ 4.14
APOLD1-204ENST00000540583 WIZO95785 1651 aa40.58■■■■■ 4.09
APOLD1-204ENST00000540583 ERCC6Q03468 1493 aa40.53■■■■■ 4.08
APOLD1-204ENST00000540583 NESP48681 1621 aa40.46■■■■■ 4.07
APOLD1-204ENST00000540583 RSF1Q96T23 1441 aaPredicted RBP40.41■■■■■ 4.06
APOLD1-204ENST00000540583 LAMC3Q9Y6N6 1575 aa40.3■■■■■ 4.04
APOLD1-204ENST00000540583 CUX2O14529 1486 aa40.17■■■■■ 4.02
APOLD1-204ENST00000540583 CADPSQ9ULU8 1353 aa40.11■■■■■ 4.01
APOLD1-204ENST00000540583 TOP2AP11388 1531 aaKnown RBP40.11■■■■■ 4.01
APOLD1-204ENST00000540583 PDS5BQ9NTI5 1447 aa40.08■■■■■ 4.01
APOLD1-204ENST00000540583 KIF21AQ7Z4S6 1674 aa39.98■■■■□ 3.99
APOLD1-204ENST00000540583 THOC2Q8NI27 1593 aaKnown RBP39.89■■■■□ 3.98
APOLD1-204ENST00000540583 CFTRP13569 1480 aa39.75■■■■□ 3.95
APOLD1-204ENST00000540583 MRC2Q9UBG0 1479 aa39.67■■■■□ 3.94
APOLD1-204ENST00000540583 FANCD2Q9BXW9 1451 aa39.66■■■■□ 3.94
APOLD1-204ENST00000540583 CEP164Q9UPV0 1460 aa39.66■■■■□ 3.94
APOLD1-204ENST00000540583 CCDC88BA6NC98 1476 aa39.65■■■■□ 3.94
APOLD1-204ENST00000540583 WDR62O43379 1518 aa39.51■■■■□ 3.92
APOLD1-204ENST00000540583 PRDM2Q13029 1718 aa39.43■■■■□ 3.9
APOLD1-204ENST00000540583 DNAJC5Q9H3Z4 198 aa39.43■■■■□ 3.9
APOLD1-204ENST00000540583 URB2Q14146 1524 aaKnown RBP39.25■■■■□ 3.87
APOLD1-204ENST00000540583 SUPT5HO00267 1087 aaKnown RBP39.24■■■■□ 3.87
APOLD1-204ENST00000540583 ABCC8Q09428 1581 aa38.96■■■■□ 3.83
APOLD1-204ENST00000540583 TOPBP1Q92547 1522 aa38.96■■■■□ 3.83
APOLD1-204ENST00000540583 DNMBPQ6XZF7 1577 aa38.89■■■■□ 3.82
APOLD1-204ENST00000540583 IFT140Q96RY7 1462 aa38.84■■■■□ 3.81
APOLD1-204ENST00000540583 ZNF608Q9ULD9 1512 aaPredicted RBP38.68■■■■□ 3.78
APOLD1-204ENST00000540583 POLA1P09884 1462 aaPredicted RBP38.6■■■■□ 3.77
APOLD1-204ENST00000540583 TARBP1Q13395 1621 aaKnown RBP38.53■■■■□ 3.76
APOLD1-204ENST00000540583 OSCARQ8IYS5 282 aa38.51■■■■□ 3.76
APOLD1-204ENST00000540583 EIF4G3O43432 1585 aaKnown RBP38.51■■■■□ 3.76
APOLD1-204ENST00000540583 CUX1P39880 1505 aa38.5■■■■□ 3.75
APOLD1-204ENST00000540583 SOGA1O94964 1423 aa38.48■■■■□ 3.75
APOLD1-204ENST00000540583 FGD5Q6ZNL6 1462 aa38.47■■■■□ 3.75
APOLD1-204ENST00000540583 RAD54L2Q9Y4B4 1467 aa38.47■■■■□ 3.75
APOLD1-204ENST00000540583 AQRO60306 1485 aaKnown RBP eCLIP38.44■■■■□ 3.74
APOLD1-204ENST00000540583 TDRD9Q8NDG6 1382 aaKnown RBP38.31■■■■□ 3.72
APOLD1-204ENST00000540583 WDR97A6NE52 1622 aa38.22■■■■□ 3.71
APOLD1-204ENST00000540583 FBLN2P98095 1184 aa38.18■■■■□ 3.7
APOLD1-204ENST00000540583 WRNQ14191 1432 aaPredicted RBP eCLIP38.15■■■■□ 3.7
APOLD1-204ENST00000540583 CHD1O14646 1710 aa38.12■■■■□ 3.69
APOLD1-204ENST00000540583 TRIM41Q8WV44 630 aa38.08■■■■□ 3.69
APOLD1-204ENST00000540583 TOP2BQ02880 1626 aa38.07■■■■□ 3.68
APOLD1-204ENST00000540583 SNAPC4Q5SXM2 1469 aa38.07■■■■□ 3.68
APOLD1-204ENST00000540583 BIVM-ERCC5R4GMW8 1640 aa38.06■■■■□ 3.68
APOLD1-204ENST00000540583 GRIN2BQ13224 1484 aa38.06■■■■□ 3.68
APOLD1-204ENST00000540583 ABCA10Q8WWZ4 1543 aa38.05■■■■□ 3.68
APOLD1-204ENST00000540583 SYNJ1O43426 1573 aa38.04■■■■□ 3.68
APOLD1-204ENST00000540583 GAPVD1Q14C86 1478 aa38.02■■■■□ 3.68
APOLD1-204ENST00000540583 MAGI1Q96QZ7 1491 aaPredicted RBP37.98■■■■□ 3.67
APOLD1-204ENST00000540583 CHMP7Q8WUX9 453 aaPredicted RBP37.97■■■■□ 3.67
APOLD1-204ENST00000540583 PBRM1Q86U86 1689 aa37.95■■■■□ 3.67
APOLD1-204ENST00000540583 ABCA5Q8WWZ7 1642 aa37.91■■■■□ 3.66
APOLD1-204ENST00000540583 RIMBP3CA6NJZ7 1639 aa37.87■■■■□ 3.65
APOLD1-204ENST00000540583 RIMBP3BA6NNM3 1639 aa37.87■■■■□ 3.65
APOLD1-204ENST00000540583 RIMBP3Q9UFD9 1639 aa37.87■■■■□ 3.65
APOLD1-204ENST00000540583 SYNJ2O15056 1496 aa37.85■■■■□ 3.65
APOLD1-204ENST00000540583 ARHGEF11O15085 1522 aa37.82■■■■□ 3.64
APOLD1-204ENST00000540583 CLASP1Q7Z460 1538 aa37.64■■■■□ 3.62
APOLD1-204ENST00000540583 ADAMTS12P58397 1594 aa37.6■■■■□ 3.61
APOLD1-204ENST00000540583 ERICH3Q5RHP9 1530 aa37.6■■■■□ 3.61
APOLD1-204ENST00000540583 CYB5RLQ6IPT4 315 aa37.58■■■■□ 3.61
APOLD1-204ENST00000540583 FHAD1B1AJZ9 1412 aa37.56■■■■□ 3.6
APOLD1-204ENST00000540583 GRIN2AQ12879 1464 aa37.56■■■■□ 3.6
APOLD1-204ENST00000540583 ARAP1Q96P48 1450 aa37.46■■■■□ 3.59
APOLD1-204ENST00000540583 KIF27Q86VH2 1401 aa37.41■■■■□ 3.58
APOLD1-204ENST00000540583 NUP160Q12769 1436 aa37.37■■■■□ 3.57
APOLD1-204ENST00000540583 CEP170Q5SW79 1584 aa37.36■■■■□ 3.57
APOLD1-204ENST00000540583 IGF1RP08069 1367 aa37.27■■■■□ 3.56
APOLD1-204ENST00000540583 CUL7Q14999 1698 aa37.19■■■■□ 3.54
APOLD1-204ENST00000540583 SHROOM2Q13796 1616 aa37.12■■■■□ 3.53
APOLD1-204ENST00000540583 ERCC6L2Q5T890 1561 aa37.11■■■■□ 3.53
APOLD1-204ENST00000540583 CARMIL1Q5VZK9 1371 aa37.07■■■■□ 3.53
APOLD1-204ENST00000540583 JPH4Q96JJ6 628 aa37.07■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms