RNA–Protein interactions for RNA: ENST00000540565.1

HIST4H4-205, Transcript of histone cluster 4 H4, humanhuman

TSL 3

Gene HIST4H4, Length 577 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-205ENST00000540565 NISCHQ9Y2I1 1504 aa31.27■■■□□ 2.6
HIST4H4-205ENST00000540565 ABCC9O60706 1549 aa27.99■■■□□ 2.07
HIST4H4-205ENST00000540565 CCDC180Q9P1Z9 1646 aa27.98■■■□□ 2.07
HIST4H4-205ENST00000540565 RB1CC1Q8TDY2 1594 aa26.64■■□□□ 1.86
HIST4H4-205ENST00000540565 NACADO15069 1562 aa26.48■■□□□ 1.83
HIST4H4-205ENST00000540565 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
HIST4H4-205ENST00000540565 DNAJC5BQ9UF47 199 aa26.27■■□□□ 1.8
HIST4H4-205ENST00000540565 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.78
HIST4H4-205ENST00000540565 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.77
HIST4H4-205ENST00000540565 UNC13AQ9UPW8 1703 aa25.98■■□□□ 1.75
HIST4H4-205ENST00000540565 ZCCHC6Q5VYS8 1495 aaKnown RBP25.91■■□□□ 1.74
HIST4H4-205ENST00000540565 BICRAQ9NZM4 1560 aa25.87■■□□□ 1.73
HIST4H4-205ENST00000540565 DCAF1Q9Y4B6 1507 aa25.83■■□□□ 1.72
HIST4H4-205ENST00000540565 SHROOM4Q9ULL8 1493 aa25.53■■□□□ 1.68
HIST4H4-205ENST00000540565 SCRIBQ14160 1630 aa25.51■■□□□ 1.67
HIST4H4-205ENST00000540565 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
HIST4H4-205ENST00000540565 EIF4G1Q04637 1599 aaKnown RBP25.23■■□□□ 1.63
HIST4H4-205ENST00000540565 CECR2Q9BXF3 1484 aa25.21■■□□□ 1.63
HIST4H4-205ENST00000540565 NCAPD3P42695 1498 aa24.48■■□□□ 1.51
HIST4H4-205ENST00000540565 ATAD2BQ9ULI0 1458 aa24.4■■□□□ 1.5
HIST4H4-205ENST00000540565 SMARCA4P51532 1647 aa24.35■■□□□ 1.49
HIST4H4-205ENST00000540565 SMARCA2P51531 1590 aa24.3■■□□□ 1.48
HIST4H4-205ENST00000540565 HMGXB3Q12766 1538 aa24.26■■□□□ 1.47
HIST4H4-205ENST00000540565 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
HIST4H4-205ENST00000540565 ERCC6Q03468 1493 aa24.15■■□□□ 1.46
HIST4H4-205ENST00000540565 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
HIST4H4-205ENST00000540565 PEG3Q9GZU2 1588 aa24.13■■□□□ 1.45
HIST4H4-205ENST00000540565 MROH2BQ7Z745 1585 aa24.09■■□□□ 1.45
HIST4H4-205ENST00000540565 CUX2O14529 1486 aa24.09■■□□□ 1.45
HIST4H4-205ENST00000540565 DNAJC5Q9H3Z4 198 aa24.08■■□□□ 1.45
HIST4H4-205ENST00000540565 NESP48681 1621 aa24.06■■□□□ 1.44
HIST4H4-205ENST00000540565 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
HIST4H4-205ENST00000540565 WIZO95785 1651 aa23.78■■□□□ 1.4
HIST4H4-205ENST00000540565 PDS5BQ9NTI5 1447 aa23.77■■□□□ 1.4
HIST4H4-205ENST00000540565 THOC2Q8NI27 1593 aaKnown RBP23.77■■□□□ 1.4
HIST4H4-205ENST00000540565 CADPSQ9ULU8 1353 aa23.75■■□□□ 1.39
HIST4H4-205ENST00000540565 KIF21AQ7Z4S6 1674 aa23.7■■□□□ 1.38
HIST4H4-205ENST00000540565 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.37
HIST4H4-205ENST00000540565 MRC2Q9UBG0 1479 aa23.55■■□□□ 1.36
HIST4H4-205ENST00000540565 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
HIST4H4-205ENST00000540565 WDR62O43379 1518 aa23.48■■□□□ 1.35
HIST4H4-205ENST00000540565 CFTRP13569 1480 aa23.47■■□□□ 1.35
HIST4H4-205ENST00000540565 FANCD2Q9BXW9 1451 aa23.45■■□□□ 1.34
HIST4H4-205ENST00000540565 CEP164Q9UPV0 1460 aa23.45■■□□□ 1.34
HIST4H4-205ENST00000540565 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
HIST4H4-205ENST00000540565 URB2Q14146 1524 aaKnown RBP23.25■■□□□ 1.31
HIST4H4-205ENST00000540565 PRDM2Q13029 1718 aa23.13■■□□□ 1.29
HIST4H4-205ENST00000540565 OSCARQ8IYS5 282 aa23.05■■□□□ 1.28
HIST4H4-205ENST00000540565 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
HIST4H4-205ENST00000540565 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
HIST4H4-205ENST00000540565 IFT140Q96RY7 1462 aa23■■□□□ 1.27
HIST4H4-205ENST00000540565 ZNF608Q9ULD9 1512 aaPredicted RBP22.97■■□□□ 1.27
HIST4H4-205ENST00000540565 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
HIST4H4-205ENST00000540565 DNMBPQ6XZF7 1577 aa22.91■■□□□ 1.26
HIST4H4-205ENST00000540565 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
HIST4H4-205ENST00000540565 TARBP1Q13395 1621 aaKnown RBP22.79■■□□□ 1.24
HIST4H4-205ENST00000540565 AQRO60306 1485 aaKnown RBP eCLIP22.78■■□□□ 1.24
HIST4H4-205ENST00000540565 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
HIST4H4-205ENST00000540565 RAD54L2Q9Y4B4 1467 aa22.71■■□□□ 1.23
HIST4H4-205ENST00000540565 SOGA1O94964 1423 aa22.69■■□□□ 1.22
HIST4H4-205ENST00000540565 RIMBP3CA6NJZ7 1639 aa22.68■■□□□ 1.22
HIST4H4-205ENST00000540565 RIMBP3BA6NNM3 1639 aa22.68■■□□□ 1.22
HIST4H4-205ENST00000540565 RIMBP3Q9UFD9 1639 aa22.68■■□□□ 1.22
HIST4H4-205ENST00000540565 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
HIST4H4-205ENST00000540565 SUPT5HO00267 1087 aaKnown RBP22.64■■□□□ 1.21
HIST4H4-205ENST00000540565 FGD5Q6ZNL6 1462 aa22.64■■□□□ 1.21
HIST4H4-205ENST00000540565 ARHGEF11O15085 1522 aa22.63■■□□□ 1.21
HIST4H4-205ENST00000540565 FBLN2P98095 1184 aa22.63■■□□□ 1.21
HIST4H4-205ENST00000540565 CUX1P39880 1505 aa22.62■■□□□ 1.21
HIST4H4-205ENST00000540565 CHD1O14646 1710 aa22.6■■□□□ 1.21
HIST4H4-205ENST00000540565 WDR97A6NE52 1622 aa22.54■■□□□ 1.2
HIST4H4-205ENST00000540565 SNAPC4Q5SXM2 1469 aa22.52■■□□□ 1.2
HIST4H4-205ENST00000540565 CYB5RLQ6IPT4 315 aa22.51■■□□□ 1.19
HIST4H4-205ENST00000540565 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
HIST4H4-205ENST00000540565 CHMP7Q8WUX9 453 aaPredicted RBP22.47■■□□□ 1.19
HIST4H4-205ENST00000540565 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
HIST4H4-205ENST00000540565 ARAP1Q96P48 1450 aa22.41■■□□□ 1.18
HIST4H4-205ENST00000540565 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
HIST4H4-205ENST00000540565 SYNJ2O15056 1496 aa22.4■■□□□ 1.18
HIST4H4-205ENST00000540565 ABCA10Q8WWZ4 1543 aa22.39■■□□□ 1.17
HIST4H4-205ENST00000540565 CLASP1Q7Z460 1538 aa22.38■■□□□ 1.17
HIST4H4-205ENST00000540565 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
HIST4H4-205ENST00000540565 WRNQ14191 1432 aaPredicted RBP eCLIP22.32■■□□□ 1.16
HIST4H4-205ENST00000540565 ABCA5Q8WWZ7 1642 aa22.32■■□□□ 1.16
HIST4H4-205ENST00000540565 PBRM1Q86U86 1689 aa22.32■■□□□ 1.16
HIST4H4-205ENST00000540565 TOP2BQ02880 1626 aa22.27■■□□□ 1.16
HIST4H4-205ENST00000540565 BIVM-ERCC5R4GMW8 1640 aa22.24■■□□□ 1.15
HIST4H4-205ENST00000540565 TRHP20396 242 aaPredicted RBP22.23■■□□□ 1.15
HIST4H4-205ENST00000540565 GRIN2AQ12879 1464 aa22.18■■□□□ 1.14
HIST4H4-205ENST00000540565 ADAMTS12P58397 1594 aa22.15■■□□□ 1.14
HIST4H4-205ENST00000540565 FHAD1B1AJZ9 1412 aa22.13■■□□□ 1.13
HIST4H4-205ENST00000540565 NUP160Q12769 1436 aa22.12■■□□□ 1.13
HIST4H4-205ENST00000540565 ERICH3Q5RHP9 1530 aa22.1■■□□□ 1.13
HIST4H4-205ENST00000540565 CEP170Q5SW79 1584 aa22.09■■□□□ 1.13
HIST4H4-205ENST00000540565 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
HIST4H4-205ENST00000540565 SHROOM2Q13796 1616 aa21.98■■□□□ 1.11
HIST4H4-205ENST00000540565 JPH4Q96JJ6 628 aa21.92■■□□□ 1.1
HIST4H4-205ENST00000540565 PRG4Q92954 1404 aaPredicted RBP21.91■■□□□ 1.1
HIST4H4-205ENST00000540565 IGF1RP08069 1367 aa21.87■■□□□ 1.09
HIST4H4-205ENST00000540565 KIF27Q86VH2 1401 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms