RNA–Protein interactions for RNA: ENST00000540554.1

FERMT3-203, Transcript of fermitin family member 3, humanhuman

TSL 3

Gene FERMT3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-203ENST00000540554 NISCHQ9Y2I1 1504 aa43.32■■■■■ 4.52
FERMT3-203ENST00000540554 CCDC180Q9P1Z9 1646 aa39.06■■■■□ 3.84
FERMT3-203ENST00000540554 ABCC9O60706 1549 aa38.91■■■■□ 3.82
FERMT3-203ENST00000540554 RB1CC1Q8TDY2 1594 aa37.1■■■■□ 3.53
FERMT3-203ENST00000540554 NACADO15069 1562 aa36.79■■■■□ 3.48
FERMT3-203ENST00000540554 DCAF8L2P0C7V8 631 aa36.54■■■■□ 3.44
FERMT3-203ENST00000540554 UNC13AQ9UPW8 1703 aa36.48■■■■□ 3.43
FERMT3-203ENST00000540554 DNAJC5BQ9UF47 199 aa36.31■■■■□ 3.4
FERMT3-203ENST00000540554 MYO15BQ96JP2 1530 aa36.19■■■■□ 3.38
FERMT3-203ENST00000540554 PABPN1Q86U42 306 aaKnown RBP eCLIP36.12■■■■□ 3.37
FERMT3-203ENST00000540554 BICRAQ9NZM4 1560 aa35.97■■■■□ 3.35
FERMT3-203ENST00000540554 ZCCHC6Q5VYS8 1495 aaKnown RBP35.92■■■■□ 3.34
FERMT3-203ENST00000540554 DCAF1Q9Y4B6 1507 aa35.76■■■■□ 3.31
FERMT3-203ENST00000540554 SCRIBQ14160 1630 aa35.57■■■■□ 3.29
FERMT3-203ENST00000540554 SHROOM4Q9ULL8 1493 aa35.45■■■■□ 3.27
FERMT3-203ENST00000540554 CC2D2AQ9P2K1 1620 aa35.21■■■■□ 3.23
FERMT3-203ENST00000540554 EIF4G1Q04637 1599 aaKnown RBP35.1■■■■□ 3.21
FERMT3-203ENST00000540554 CECR2Q9BXF3 1484 aa35.03■■■■□ 3.2
FERMT3-203ENST00000540554 SMARCA4P51532 1647 aa33.9■■■■□ 3.02
FERMT3-203ENST00000540554 NCAPD3P42695 1498 aa33.85■■■■□ 3.01
FERMT3-203ENST00000540554 ATAD2BQ9ULI0 1458 aa33.79■■■■□ 3
FERMT3-203ENST00000540554 SMARCA2P51531 1590 aa33.79■■■■□ 3
FERMT3-203ENST00000540554 HMGXB3Q12766 1538 aa33.73■■■□□ 2.99
FERMT3-203ENST00000540554 BAZ1AQ9NRL2 1556 aaPredicted RBP33.68■■■□□ 2.98
FERMT3-203ENST00000540554 ERCC6Q03468 1493 aa33.63■■■□□ 2.97
FERMT3-203ENST00000540554 BAZ1BQ9UIG0 1483 aaKnown RBP33.55■■■□□ 2.96
FERMT3-203ENST00000540554 CUX2O14529 1486 aa33.51■■■□□ 2.96
FERMT3-203ENST00000540554 PEG3Q9GZU2 1588 aa33.49■■■□□ 2.95
FERMT3-203ENST00000540554 NESP48681 1621 aa33.42■■■□□ 2.94
FERMT3-203ENST00000540554 MROH2BQ7Z745 1585 aa33.39■■■□□ 2.94
FERMT3-203ENST00000540554 DNAJC5Q9H3Z4 198 aa33.36■■■□□ 2.93
FERMT3-203ENST00000540554 LAMC3Q9Y6N6 1575 aa33.24■■■□□ 2.91
FERMT3-203ENST00000540554 KIF21AQ7Z4S6 1674 aa33.2■■■□□ 2.9
FERMT3-203ENST00000540554 THOC2Q8NI27 1593 aaKnown RBP33.17■■■□□ 2.9
FERMT3-203ENST00000540554 WIZO95785 1651 aa33.11■■■□□ 2.89
FERMT3-203ENST00000540554 PDS5BQ9NTI5 1447 aa32.94■■■□□ 2.86
FERMT3-203ENST00000540554 CADPSQ9ULU8 1353 aa32.82■■■□□ 2.84
FERMT3-203ENST00000540554 MRC2Q9UBG0 1479 aa32.72■■■□□ 2.83
FERMT3-203ENST00000540554 WDR62O43379 1518 aa32.66■■■□□ 2.82
FERMT3-203ENST00000540554 TOP2AP11388 1531 aaKnown RBP32.63■■■□□ 2.81
FERMT3-203ENST00000540554 RSF1Q96T23 1441 aaPredicted RBP32.62■■■□□ 2.81
FERMT3-203ENST00000540554 CEP164Q9UPV0 1460 aa32.61■■■□□ 2.81
FERMT3-203ENST00000540554 PRDM2Q13029 1718 aa32.54■■■□□ 2.8
FERMT3-203ENST00000540554 FANCD2Q9BXW9 1451 aa32.54■■■□□ 2.8
FERMT3-203ENST00000540554 CFTRP13569 1480 aa32.48■■■□□ 2.79
FERMT3-203ENST00000540554 URB2Q14146 1524 aaKnown RBP32.27■■■□□ 2.76
FERMT3-203ENST00000540554 CCDC88BA6NC98 1476 aa32.17■■■□□ 2.74
FERMT3-203ENST00000540554 TRIM41Q8WV44 630 aa32.03■■■□□ 2.72
FERMT3-203ENST00000540554 TOPBP1Q92547 1522 aa31.94■■■□□ 2.7
FERMT3-203ENST00000540554 IFT140Q96RY7 1462 aa31.91■■■□□ 2.7
FERMT3-203ENST00000540554 OSCARQ8IYS5 282 aa31.89■■■□□ 2.7
FERMT3-203ENST00000540554 DNMBPQ6XZF7 1577 aa31.88■■■□□ 2.69
FERMT3-203ENST00000540554 ZNF608Q9ULD9 1512 aaPredicted RBP31.86■■■□□ 2.69
FERMT3-203ENST00000540554 ABCC8Q09428 1581 aa31.85■■■□□ 2.69
FERMT3-203ENST00000540554 EIF4G3O43432 1585 aaKnown RBP31.83■■■□□ 2.69
FERMT3-203ENST00000540554 CHD1O14646 1710 aa31.7■■■□□ 2.67
FERMT3-203ENST00000540554 TARBP1Q13395 1621 aaKnown RBP31.7■■■□□ 2.66
FERMT3-203ENST00000540554 RIMBP3CA6NJZ7 1639 aa31.68■■■□□ 2.66
FERMT3-203ENST00000540554 RIMBP3BA6NNM3 1639 aa31.68■■■□□ 2.66
FERMT3-203ENST00000540554 RIMBP3Q9UFD9 1639 aa31.68■■■□□ 2.66
FERMT3-203ENST00000540554 POLA1P09884 1462 aaPredicted RBP31.59■■■□□ 2.65
FERMT3-203ENST00000540554 AQRO60306 1485 aaKnown RBP eCLIP31.54■■■□□ 2.647e-6■■□□□ 12.2
FERMT3-203ENST00000540554 ARHGEF11O15085 1522 aa31.5■■■□□ 2.63
FERMT3-203ENST00000540554 RAD54L2Q9Y4B4 1467 aa31.47■■■□□ 2.63
FERMT3-203ENST00000540554 FGD5Q6ZNL6 1462 aa31.43■■■□□ 2.62
FERMT3-203ENST00000540554 SOGA1O94964 1423 aa31.41■■■□□ 2.62
FERMT3-203ENST00000540554 CUX1P39880 1505 aa31.39■■■□□ 2.62
FERMT3-203ENST00000540554 WDR97A6NE52 1622 aa31.39■■■□□ 2.62
FERMT3-203ENST00000540554 FBLN2P98095 1184 aa31.36■■■□□ 2.61
FERMT3-203ENST00000540554 TDRD9Q8NDG6 1382 aaKnown RBP31.33■■■□□ 2.61
FERMT3-203ENST00000540554 PBRM1Q86U86 1689 aa31.3■■■□□ 2.6
FERMT3-203ENST00000540554 SNAPC4Q5SXM2 1469 aa31.29■■■□□ 2.6
FERMT3-203ENST00000540554 SUPT5HO00267 1087 aaKnown RBP31.23■■■□□ 2.59
FERMT3-203ENST00000540554 MAGI1Q96QZ7 1491 aaPredicted RBP31.2■■■□□ 2.58
FERMT3-203ENST00000540554 SYNJ1O43426 1573 aa31.18■■■□□ 2.58
FERMT3-203ENST00000540554 GRIN2BQ13224 1484 aa31.17■■■□□ 2.58
FERMT3-203ENST00000540554 ARAP1Q96P48 1450 aa31.17■■■□□ 2.58
FERMT3-203ENST00000540554 CYB5RLQ6IPT4 315 aa31.17■■■□□ 2.58
FERMT3-203ENST00000540554 CLASP1Q7Z460 1538 aa31.14■■■□□ 2.57
FERMT3-203ENST00000540554 ABCA5Q8WWZ7 1642 aa31.09■■■□□ 2.57
FERMT3-203ENST00000540554 CHMP7Q8WUX9 453 aaPredicted RBP31.09■■■□□ 2.57
FERMT3-203ENST00000540554 SYNJ2O15056 1496 aa31.08■■■□□ 2.57
FERMT3-203ENST00000540554 GAPVD1Q14C86 1478 aa31.07■■■□□ 2.56
FERMT3-203ENST00000540554 ABCA10Q8WWZ4 1543 aa31.03■■■□□ 2.56
FERMT3-203ENST00000540554 BIVM-ERCC5R4GMW8 1640 aa31■■■□□ 2.55
FERMT3-203ENST00000540554 TOP2BQ02880 1626 aa30.94■■■□□ 2.54
FERMT3-203ENST00000540554 TRHP20396 242 aaPredicted RBP30.89■■■□□ 2.54
FERMT3-203ENST00000540554 WRNQ14191 1432 aaPredicted RBP eCLIP30.89■■■□□ 2.53
FERMT3-203ENST00000540554 ADAMTS12P58397 1594 aa30.87■■■□□ 2.53
FERMT3-203ENST00000540554 GRIN2AQ12879 1464 aa30.79■■■□□ 2.52
FERMT3-203ENST00000540554 CEP170Q5SW79 1584 aa30.74■■■□□ 2.51
FERMT3-203ENST00000540554 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
FERMT3-203ENST00000540554 ERCC6L2Q5T890 1561 aa30.66■■■□□ 2.5
FERMT3-203ENST00000540554 FHAD1B1AJZ9 1412 aa30.64■■■□□ 2.5
FERMT3-203ENST00000540554 NUP160Q12769 1436 aa30.63■■■□□ 2.49
FERMT3-203ENST00000540554 SHROOM2Q13796 1616 aa30.62■■■□□ 2.49
FERMT3-203ENST00000540554 RUSC2Q8N2Y8 1516 aa30.43■■■□□ 2.46
FERMT3-203ENST00000540554 PRG4Q92954 1404 aaPredicted RBP30.36■■■□□ 2.45
FERMT3-203ENST00000540554 CUL7Q14999 1698 aa30.36■■■□□ 2.45
FERMT3-203ENST00000540554 KIF13AQ9H1H9 1805 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms