RNA–Protein interactions for RNA: ENST00000540493.1

GALNT9-207, Transcript of polypeptide N-acetylgalactosaminyltransferase 9, humanhuman

TSL 4

Gene GALNT9, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GALNT9-207ENST00000540493 NISCHQ9Y2I1 1504 aa43.37■■■■■ 4.53
GALNT9-207ENST00000540493 CCDC180Q9P1Z9 1646 aa39■■■■□ 3.83
GALNT9-207ENST00000540493 ABCC9O60706 1549 aa38.86■■■■□ 3.81
GALNT9-207ENST00000540493 RB1CC1Q8TDY2 1594 aa37.08■■■■□ 3.53
GALNT9-207ENST00000540493 NACADO15069 1562 aa36.83■■■■□ 3.49
GALNT9-207ENST00000540493 DCAF8L2P0C7V8 631 aa36.42■■■■□ 3.42
GALNT9-207ENST00000540493 MYO15BQ96JP2 1530 aa36.39■■■■□ 3.42
GALNT9-207ENST00000540493 DNAJC5BQ9UF47 199 aa36.38■■■■□ 3.41
GALNT9-207ENST00000540493 UNC13AQ9UPW8 1703 aa36.22■■■■□ 3.39
GALNT9-207ENST00000540493 PABPN1Q86U42 306 aaKnown RBP eCLIP36.1■■■■□ 3.37
GALNT9-207ENST00000540493 ZCCHC6Q5VYS8 1495 aaKnown RBP35.98■■■■□ 3.35
GALNT9-207ENST00000540493 BICRAQ9NZM4 1560 aa35.98■■■■□ 3.35
GALNT9-207ENST00000540493 DCAF1Q9Y4B6 1507 aa35.9■■■■□ 3.34
GALNT9-207ENST00000540493 SHROOM4Q9ULL8 1493 aa35.61■■■■□ 3.29
GALNT9-207ENST00000540493 SCRIBQ14160 1630 aa35.43■■■■□ 3.26
GALNT9-207ENST00000540493 CC2D2AQ9P2K1 1620 aa35.16■■■■□ 3.22
GALNT9-207ENST00000540493 EIF4G1Q04637 1599 aaKnown RBP35.11■■■■□ 3.21
GALNT9-207ENST00000540493 CECR2Q9BXF3 1484 aa35.04■■■■□ 3.2
GALNT9-207ENST00000540493 NCAPD3P42695 1498 aa33.98■■■■□ 3.03
GALNT9-207ENST00000540493 ATAD2BQ9ULI0 1458 aa33.86■■■■□ 3.01
GALNT9-207ENST00000540493 SMARCA4P51532 1647 aa33.85■■■■□ 3.01
GALNT9-207ENST00000540493 SMARCA2P51531 1590 aa33.81■■■■□ 3
GALNT9-207ENST00000540493 HMGXB3Q12766 1538 aa33.79■■■■□ 3
GALNT9-207ENST00000540493 BAZ1AQ9NRL2 1556 aaPredicted RBP33.7■■■□□ 2.99
GALNT9-207ENST00000540493 CUX2O14529 1486 aa33.6■■■□□ 2.97
GALNT9-207ENST00000540493 ERCC6Q03468 1493 aa33.59■■■□□ 2.97
GALNT9-207ENST00000540493 PEG3Q9GZU2 1588 aa33.57■■■□□ 2.96
GALNT9-207ENST00000540493 BAZ1BQ9UIG0 1483 aaKnown RBP33.54■■■□□ 2.96
GALNT9-207ENST00000540493 DNAJC5Q9H3Z4 198 aa33.48■■■□□ 2.95
GALNT9-207ENST00000540493 MROH2BQ7Z745 1585 aa33.38■■■□□ 2.93
GALNT9-207ENST00000540493 NESP48681 1621 aa33.38■■■□□ 2.93
GALNT9-207ENST00000540493 LAMC3Q9Y6N6 1575 aa33.26■■■□□ 2.91
GALNT9-207ENST00000540493 THOC2Q8NI27 1593 aaKnown RBP33.14■■■□□ 2.9
GALNT9-207ENST00000540493 PDS5BQ9NTI5 1447 aa33.02■■■□□ 2.88
GALNT9-207ENST00000540493 KIF21AQ7Z4S6 1674 aa33.01■■■□□ 2.87
GALNT9-207ENST00000540493 WIZO95785 1651 aa32.98■■■□□ 2.87
GALNT9-207ENST00000540493 CADPSQ9ULU8 1353 aa32.92■■■□□ 2.86
GALNT9-207ENST00000540493 MRC2Q9UBG0 1479 aa32.74■■■□□ 2.83
GALNT9-207ENST00000540493 WDR62O43379 1518 aa32.69■■■□□ 2.82
GALNT9-207ENST00000540493 RSF1Q96T23 1441 aaPredicted RBP32.68■■■□□ 2.82
GALNT9-207ENST00000540493 TOP2AP11388 1531 aaKnown RBP32.62■■■□□ 2.81
GALNT9-207ENST00000540493 CEP164Q9UPV0 1460 aa32.61■■■□□ 2.81
GALNT9-207ENST00000540493 CFTRP13569 1480 aa32.58■■■□□ 2.81
GALNT9-207ENST00000540493 FANCD2Q9BXW9 1451 aa32.55■■■□□ 2.8
GALNT9-207ENST00000540493 PRDM2Q13029 1718 aa32.3■■■□□ 2.76
GALNT9-207ENST00000540493 URB2Q14146 1524 aaKnown RBP32.28■■■□□ 2.76
GALNT9-207ENST00000540493 CCDC88BA6NC98 1476 aa32.19■■■□□ 2.74
GALNT9-207ENST00000540493 IFT140Q96RY7 1462 aa31.97■■■□□ 2.71
GALNT9-207ENST00000540493 OSCARQ8IYS5 282 aa31.96■■■□□ 2.71
GALNT9-207ENST00000540493 TRIM41Q8WV44 630 aa31.94■■■□□ 2.7
GALNT9-207ENST00000540493 TOPBP1Q92547 1522 aa31.94■■■□□ 2.7
GALNT9-207ENST00000540493 ABCC8Q09428 1581 aa31.91■■■□□ 2.7
GALNT9-207ENST00000540493 DNMBPQ6XZF7 1577 aa31.85■■■□□ 2.69
GALNT9-207ENST00000540493 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
GALNT9-207ENST00000540493 EIF4G3O43432 1585 aaKnown RBP31.75■■■□□ 2.67
GALNT9-207ENST00000540493 TARBP1Q13395 1621 aaKnown RBP31.68■■■□□ 2.66
GALNT9-207ENST00000540493 POLA1P09884 1462 aaPredicted RBP31.62■■■□□ 2.65
GALNT9-207ENST00000540493 RIMBP3CA6NJZ7 1639 aa31.6■■■□□ 2.65
GALNT9-207ENST00000540493 RIMBP3BA6NNM3 1639 aa31.6■■■□□ 2.65
GALNT9-207ENST00000540493 RIMBP3Q9UFD9 1639 aa31.6■■■□□ 2.65
GALNT9-207ENST00000540493 AQRO60306 1485 aaKnown RBP eCLIP31.55■■■□□ 2.64
GALNT9-207ENST00000540493 ARHGEF11O15085 1522 aa31.51■■■□□ 2.63
GALNT9-207ENST00000540493 CHD1O14646 1710 aa31.49■■■□□ 2.63
GALNT9-207ENST00000540493 WDR97A6NE52 1622 aa31.45■■■□□ 2.62
GALNT9-207ENST00000540493 RAD54L2Q9Y4B4 1467 aa31.45■■■□□ 2.62
GALNT9-207ENST00000540493 SOGA1O94964 1423 aa31.43■■■□□ 2.62
GALNT9-207ENST00000540493 FGD5Q6ZNL6 1462 aa31.4■■■□□ 2.62
GALNT9-207ENST00000540493 CUX1P39880 1505 aa31.38■■■□□ 2.61
GALNT9-207ENST00000540493 TDRD9Q8NDG6 1382 aaKnown RBP31.33■■■□□ 2.61
GALNT9-207ENST00000540493 FBLN2P98095 1184 aa31.28■■■□□ 2.6
GALNT9-207ENST00000540493 SNAPC4Q5SXM2 1469 aa31.27■■■□□ 2.6
GALNT9-207ENST00000540493 MAGI1Q96QZ7 1491 aaPredicted RBP31.24■■■□□ 2.59
GALNT9-207ENST00000540493 GRIN2BQ13224 1484 aa31.21■■■□□ 2.59
GALNT9-207ENST00000540493 ARAP1Q96P48 1450 aa31.19■■■□□ 2.58
GALNT9-207ENST00000540493 CLASP1Q7Z460 1538 aa31.16■■■□□ 2.58
GALNT9-207ENST00000540493 CYB5RLQ6IPT4 315 aa31.16■■■□□ 2.58
GALNT9-207ENST00000540493 SYNJ1O43426 1573 aa31.14■■■□□ 2.58
GALNT9-207ENST00000540493 SYNJ2O15056 1496 aa31.12■■■□□ 2.57
GALNT9-207ENST00000540493 SUPT5HO00267 1087 aaKnown RBP31.11■■■□□ 2.57
GALNT9-207ENST00000540493 PBRM1Q86U86 1689 aa31.1■■■□□ 2.57
GALNT9-207ENST00000540493 CHMP7Q8WUX9 453 aaPredicted RBP31.1■■■□□ 2.57
GALNT9-207ENST00000540493 ABCA10Q8WWZ4 1543 aa31.08■■■□□ 2.57
GALNT9-207ENST00000540493 GAPVD1Q14C86 1478 aa31.08■■■□□ 2.57
GALNT9-207ENST00000540493 ABCA5Q8WWZ7 1642 aa31.06■■■□□ 2.56
GALNT9-207ENST00000540493 WRNQ14191 1432 aaPredicted RBP eCLIP30.93■■■□□ 2.54
GALNT9-207ENST00000540493 BIVM-ERCC5R4GMW8 1640 aa30.93■■■□□ 2.54
GALNT9-207ENST00000540493 TOP2BQ02880 1626 aa30.91■■■□□ 2.54
GALNT9-207ENST00000540493 ADAMTS12P58397 1594 aa30.82■■■□□ 2.52
GALNT9-207ENST00000540493 TRHP20396 242 aaPredicted RBP30.81■■■□□ 2.52
GALNT9-207ENST00000540493 GRIN2AQ12879 1464 aa30.81■■■□□ 2.52
GALNT9-207ENST00000540493 ERICH3Q5RHP9 1530 aa30.72■■■□□ 2.51
GALNT9-207ENST00000540493 NUP160Q12769 1436 aa30.72■■■□□ 2.51
GALNT9-207ENST00000540493 FHAD1B1AJZ9 1412 aa30.7■■■□□ 2.5
GALNT9-207ENST00000540493 CEP170Q5SW79 1584 aa30.7■■■□□ 2.5
GALNT9-207ENST00000540493 SHROOM2Q13796 1616 aa30.61■■■□□ 2.49
GALNT9-207ENST00000540493 ERCC6L2Q5T890 1561 aa30.6■■■□□ 2.49
GALNT9-207ENST00000540493 RUSC2Q8N2Y8 1516 aa30.39■■■□□ 2.46
GALNT9-207ENST00000540493 PRG4Q92954 1404 aaPredicted RBP30.37■■■□□ 2.45
GALNT9-207ENST00000540493 JPH4Q96JJ6 628 aa30.32■■■□□ 2.44
GALNT9-207ENST00000540493 CUL7Q14999 1698 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms