RNA–Protein interactions for RNA: ENST00000540394.5

C1R-206, Transcript of complement C1r, humanhuman

TSL 2

Gene C1R, Length 3,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-206ENST00000540394 NISCHQ9Y2I1 1504 aa26.3■■□□□ 1.8
C1R-206ENST00000540394 CCDC180Q9P1Z9 1646 aa22.94■■□□□ 1.26
C1R-206ENST00000540394 ZCCHC6Q5VYS8 1495 aaKnown RBP22.09■■□□□ 1.13
C1R-206ENST00000540394 ABCC9O60706 1549 aa21.82■■□□□ 1.08
C1R-206ENST00000540394 DCAF8L2P0C7V8 631 aa21.69■■□□□ 1.06
C1R-206ENST00000540394 DCAF1Q9Y4B6 1507 aa21.65■■□□□ 1.06
C1R-206ENST00000540394 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
C1R-206ENST00000540394 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.01
C1R-206ENST00000540394 NACADO15069 1562 aa21.32■■□□□ 1
C1R-206ENST00000540394 SCRIBQ14160 1630 aa21.2■□□□□ 0.98
C1R-206ENST00000540394 RB1CC1Q8TDY2 1594 aa21.17■□□□□ 0.98
C1R-206ENST00000540394 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
C1R-206ENST00000540394 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
C1R-206ENST00000540394 PABPN1Q86U42 306 aaKnown RBP eCLIP20.57■□□□□ 0.88
C1R-206ENST00000540394 SUPT5HO00267 1087 aaKnown RBP20.56■□□□□ 0.88
C1R-206ENST00000540394 CECR2Q9BXF3 1484 aa20.54■□□□□ 0.88
C1R-206ENST00000540394 MROH2BQ7Z745 1585 aa20.4■□□□□ 0.86
C1R-206ENST00000540394 RSF1Q96T23 1441 aaPredicted RBP20.39■□□□□ 0.85
C1R-206ENST00000540394 WIZO95785 1651 aa20.28■□□□□ 0.84
C1R-206ENST00000540394 SMARCA4P51532 1647 aa20.27■□□□□ 0.84
C1R-206ENST00000540394 BAZ1AQ9NRL2 1556 aaPredicted RBP20.26■□□□□ 0.83
C1R-206ENST00000540394 EIF4G1Q04637 1599 aaKnown RBP20.02■□□□□ 0.8
C1R-206ENST00000540394 PEG3Q9GZU2 1588 aa19.99■□□□□ 0.79
C1R-206ENST00000540394 TOP2AP11388 1531 aaKnown RBP19.92■□□□□ 0.78
C1R-206ENST00000540394 ATAD2BQ9ULI0 1458 aa19.9■□□□□ 0.78
C1R-206ENST00000540394 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
C1R-206ENST00000540394 CC2D2AQ9P2K1 1620 aa19.77■□□□□ 0.76
C1R-206ENST00000540394 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
C1R-206ENST00000540394 BAZ1BQ9UIG0 1483 aaKnown RBP19.75■□□□□ 0.75
C1R-206ENST00000540394 NCAPD3P42695 1498 aa19.69■□□□□ 0.74
C1R-206ENST00000540394 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
C1R-206ENST00000540394 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
C1R-206ENST00000540394 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
C1R-206ENST00000540394 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
C1R-206ENST00000540394 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
C1R-206ENST00000540394 CFTRP13569 1480 aa19.28■□□□□ 0.68
C1R-206ENST00000540394 TRIM41Q8WV44 630 aa19.24■□□□□ 0.67
C1R-206ENST00000540394 NESP48681 1621 aa19.21■□□□□ 0.67
C1R-206ENST00000540394 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
C1R-206ENST00000540394 CADPSQ9ULU8 1353 aa19.17■□□□□ 0.66
C1R-206ENST00000540394 WRNQ14191 1432 aaPredicted RBP eCLIP19.13■□□□□ 0.65
C1R-206ENST00000540394 CUX1P39880 1505 aa19.06■□□□□ 0.64
C1R-206ENST00000540394 BIVM-ERCC5R4GMW8 1640 aa19.06■□□□□ 0.64
C1R-206ENST00000540394 TOP2BQ02880 1626 aa19.05■□□□□ 0.64
C1R-206ENST00000540394 LAMC3Q9Y6N6 1575 aa19.05■□□□□ 0.64
C1R-206ENST00000540394 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
C1R-206ENST00000540394 FANCD2Q9BXW9 1451 aa19.01■□□□□ 0.63
C1R-206ENST00000540394 FAM9AQ8IZU1 332 aaPredicted RBP19■□□□□ 0.63
C1R-206ENST00000540394 RUSC2Q8N2Y8 1516 aa18.99■□□□□ 0.63
C1R-206ENST00000540394 SOGA1O94964 1423 aa18.99■□□□□ 0.63
C1R-206ENST00000540394 LOC105371045A0A1W2PR82 267 aa18.98■□□□□ 0.63
C1R-206ENST00000540394 CEP164Q9UPV0 1460 aa18.86■□□□□ 0.61
C1R-206ENST00000540394 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
C1R-206ENST00000540394 DNMBPQ6XZF7 1577 aa18.83■□□□□ 0.6
C1R-206ENST00000540394 EHMT2Q96KQ7 1210 aa18.83■□□□□ 0.6
C1R-206ENST00000540394 TOPBP1Q92547 1522 aa18.82■□□□□ 0.6
C1R-206ENST00000540394 PDS5BQ9NTI5 1447 aa18.82■□□□□ 0.6
C1R-206ENST00000540394 FGD5Q6ZNL6 1462 aa18.81■□□□□ 0.6
C1R-206ENST00000540394 POLA1P09884 1462 aaPredicted RBP18.74■□□□□ 0.59
C1R-206ENST00000540394 RAD54L2Q9Y4B4 1467 aa18.72■□□□□ 0.59
C1R-206ENST00000540394 WDR97A6NE52 1622 aa18.69■□□□□ 0.58
C1R-206ENST00000540394 EEA1Q15075 1411 aa18.68■□□□□ 0.58
C1R-206ENST00000540394 CSRNP3Q8WYN3 585 aa18.67■□□□□ 0.58
C1R-206ENST00000540394 THOC2Q8NI27 1593 aaKnown RBP18.66■□□□□ 0.58
C1R-206ENST00000540394 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
C1R-206ENST00000540394 CUX2O14529 1486 aa18.63■□□□□ 0.57
C1R-206ENST00000540394 TARBP1Q13395 1621 aaKnown RBP18.62■□□□□ 0.57
C1R-206ENST00000540394 WDR62O43379 1518 aa18.62■□□□□ 0.57
C1R-206ENST00000540394 KIF21BO75037 1637 aa18.61■□□□□ 0.57
C1R-206ENST00000540394 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
C1R-206ENST00000540394 ERCC6Q03468 1493 aa18.6■□□□□ 0.57
C1R-206ENST00000540394 RAPGEF2Q9Y4G8 1499 aa18.59■□□□□ 0.57
C1R-206ENST00000540394 KIF27Q86VH2 1401 aa18.59■□□□□ 0.57
C1R-206ENST00000540394 PRXQ9BXM0 1461 aa18.54■□□□□ 0.56
C1R-206ENST00000540394 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
C1R-206ENST00000540394 GOLGA3Q08378 1498 aa18.52■□□□□ 0.56
C1R-206ENST00000540394 IGF1RP08069 1367 aa18.52■□□□□ 0.55
C1R-206ENST00000540394 TDRD9Q8NDG6 1382 aaKnown RBP18.49■□□□□ 0.55
C1R-206ENST00000540394 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.55
C1R-206ENST00000540394 ZNF608Q9ULD9 1512 aaPredicted RBP18.46■□□□□ 0.55
C1R-206ENST00000540394 PBRM1Q86U86 1689 aa18.45■□□□□ 0.54
C1R-206ENST00000540394 TNIKQ9UKE5 1360 aa18.44■□□□□ 0.54
C1R-206ENST00000540394 AQRO60306 1485 aaKnown RBP eCLIP18.42■□□□□ 0.54
C1R-206ENST00000540394 UBTFP17480 764 aaKnown RBP18.42■□□□□ 0.54
C1R-206ENST00000540394 GAPVD1Q14C86 1478 aa18.42■□□□□ 0.54
C1R-206ENST00000540394 CEP162Q5TB80 1403 aa18.41■□□□□ 0.54
C1R-206ENST00000540394 EIF4G3O43432 1585 aaKnown RBP18.38■□□□□ 0.53
C1R-206ENST00000540394 IFT140Q96RY7 1462 aa18.38■□□□□ 0.53
C1R-206ENST00000540394 CARMIL1Q5VZK9 1371 aa18.37■□□□□ 0.53
C1R-206ENST00000540394 CUL7Q14999 1698 aa18.37■□□□□ 0.53
C1R-206ENST00000540394 RANGAP1P46060 587 aaPredicted RBP18.28■□□□□ 0.52
C1R-206ENST00000540394 ADAMTS12P58397 1594 aa18.28■□□□□ 0.52
C1R-206ENST00000540394 PELP1Q8IZL8 1130 aaKnown RBP18.26■□□□□ 0.51
C1R-206ENST00000540394 CTTNBP2Q8WZ74 1663 aa18.26■□□□□ 0.51
C1R-206ENST00000540394 CLIP1P30622 1438 aa18.24■□□□□ 0.51
C1R-206ENST00000540394 GRIN2BQ13224 1484 aa18.24■□□□□ 0.51
C1R-206ENST00000540394 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
C1R-206ENST00000540394 ARAP1Q96P48 1450 aa18.18■□□□□ 0.5
C1R-206ENST00000540394 ARHGAP35Q9NRY4 1499 aa18.17■□□□□ 0.5
C1R-206ENST00000540394 FHAD1B1AJZ9 1412 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms