RNA–Protein interactions for RNA: ENST00000540242.2

C1R-205, Transcript of complement C1r, humanhuman

TSL 4

Gene C1R, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-205ENST00000540242 NISCHQ9Y2I1 1504 aa29.55■■■□□ 2.32
C1R-205ENST00000540242 ABCC9O60706 1549 aa26.37■■□□□ 1.81
C1R-205ENST00000540242 CCDC180Q9P1Z9 1646 aa26.29■■□□□ 1.8
C1R-205ENST00000540242 DCAF8L2P0C7V8 631 aa25.04■■□□□ 1.6
C1R-205ENST00000540242 RB1CC1Q8TDY2 1594 aa24.98■■□□□ 1.59
C1R-205ENST00000540242 NACADO15069 1562 aa24.83■■□□□ 1.57
C1R-205ENST00000540242 PABPN1Q86U42 306 aaKnown RBP eCLIP24.65■■□□□ 1.54
C1R-205ENST00000540242 DNAJC5BQ9UF47 199 aa24.62■■□□□ 1.53
C1R-205ENST00000540242 ZCCHC6Q5VYS8 1495 aaKnown RBP24.56■■□□□ 1.52
C1R-205ENST00000540242 UNC13AQ9UPW8 1703 aa24.49■■□□□ 1.51
C1R-205ENST00000540242 MYO15BQ96JP2 1530 aa24.47■■□□□ 1.51
C1R-205ENST00000540242 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
C1R-205ENST00000540242 DCAF1Q9Y4B6 1507 aa24.28■■□□□ 1.48
C1R-205ENST00000540242 SCRIBQ14160 1630 aa24.23■■□□□ 1.47
C1R-205ENST00000540242 SHROOM4Q9ULL8 1493 aa23.8■■□□□ 1.4
C1R-205ENST00000540242 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
C1R-205ENST00000540242 EIF4G1Q04637 1599 aaKnown RBP23.72■■□□□ 1.39
C1R-205ENST00000540242 CECR2Q9BXF3 1484 aa23.65■■□□□ 1.38
C1R-205ENST00000540242 SMARCA4P51532 1647 aa23.02■■□□□ 1.28
C1R-205ENST00000540242 ATAD2BQ9ULI0 1458 aa23■■□□□ 1.27
C1R-205ENST00000540242 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
C1R-205ENST00000540242 MROH2BQ7Z745 1585 aa22.88■■□□□ 1.25
C1R-205ENST00000540242 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
C1R-205ENST00000540242 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
C1R-205ENST00000540242 HMGXB3Q12766 1538 aa22.8■■□□□ 1.24
C1R-205ENST00000540242 BAZ1BQ9UIG0 1483 aaKnown RBP22.79■■□□□ 1.24
C1R-205ENST00000540242 NESP48681 1621 aa22.75■■□□□ 1.23
C1R-205ENST00000540242 PEG3Q9GZU2 1588 aa22.7■■□□□ 1.22
C1R-205ENST00000540242 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
C1R-205ENST00000540242 WIZO95785 1651 aa22.61■■□□□ 1.21
C1R-205ENST00000540242 RSF1Q96T23 1441 aaPredicted RBP22.45■■□□□ 1.18
C1R-205ENST00000540242 CUX2O14529 1486 aa22.43■■□□□ 1.18
C1R-205ENST00000540242 LAMC3Q9Y6N6 1575 aa22.38■■□□□ 1.17
C1R-205ENST00000540242 THOC2Q8NI27 1593 aaKnown RBP22.35■■□□□ 1.17
C1R-205ENST00000540242 KIF21AQ7Z4S6 1674 aa22.35■■□□□ 1.17
C1R-205ENST00000540242 CADPSQ9ULU8 1353 aa22.32■■□□□ 1.16
C1R-205ENST00000540242 PDS5BQ9NTI5 1447 aa22.27■■□□□ 1.16
C1R-205ENST00000540242 DNAJC5Q9H3Z4 198 aa22.26■■□□□ 1.15
C1R-205ENST00000540242 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
C1R-205ENST00000540242 MRC2Q9UBG0 1479 aa22.13■■□□□ 1.13
C1R-205ENST00000540242 FANCD2Q9BXW9 1451 aa22.11■■□□□ 1.13
C1R-205ENST00000540242 CFTRP13569 1480 aa22.1■■□□□ 1.13
C1R-205ENST00000540242 CEP164Q9UPV0 1460 aa22.08■■□□□ 1.12
C1R-205ENST00000540242 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
C1R-205ENST00000540242 WDR62O43379 1518 aa22.05■■□□□ 1.12
C1R-205ENST00000540242 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
C1R-205ENST00000540242 PRDM2Q13029 1718 aa21.79■■□□□ 1.08
C1R-205ENST00000540242 SUPT5HO00267 1087 aaKnown RBP21.75■■□□□ 1.07
C1R-205ENST00000540242 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
C1R-205ENST00000540242 ZNF608Q9ULD9 1512 aaPredicted RBP21.71■■□□□ 1.07
C1R-205ENST00000540242 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
C1R-205ENST00000540242 IFT140Q96RY7 1462 aa21.6■■□□□ 1.05
C1R-205ENST00000540242 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
C1R-205ENST00000540242 RAD54L2Q9Y4B4 1467 aa21.53■■□□□ 1.04
C1R-205ENST00000540242 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.04
C1R-205ENST00000540242 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.03
C1R-205ENST00000540242 EIF4G3O43432 1585 aaKnown RBP21.51■■□□□ 1.03
C1R-205ENST00000540242 OSCARQ8IYS5 282 aa21.5■■□□□ 1.03
C1R-205ENST00000540242 ABCC8Q09428 1581 aa21.49■■□□□ 1.03
C1R-205ENST00000540242 TARBP1Q13395 1621 aaKnown RBP21.48■■□□□ 1.03
C1R-205ENST00000540242 CUX1P39880 1505 aa21.47■■□□□ 1.03
C1R-205ENST00000540242 FGD5Q6ZNL6 1462 aa21.44■■□□□ 1.02
C1R-205ENST00000540242 TDRD9Q8NDG6 1382 aaKnown RBP21.43■■□□□ 1.02
C1R-205ENST00000540242 SOGA1O94964 1423 aa21.4■■□□□ 1.02
C1R-205ENST00000540242 FBLN2P98095 1184 aa21.35■■□□□ 1.01
C1R-205ENST00000540242 CHD1O14646 1710 aa21.3■■□□□ 1
C1R-205ENST00000540242 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
C1R-205ENST00000540242 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
C1R-205ENST00000540242 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
C1R-205ENST00000540242 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
C1R-205ENST00000540242 ARHGEF11O15085 1522 aa21.21■□□□□ 0.99
C1R-205ENST00000540242 WDR97A6NE52 1622 aa21.2■□□□□ 0.98
C1R-205ENST00000540242 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
C1R-205ENST00000540242 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
C1R-205ENST00000540242 GAPVD1Q14C86 1478 aa21.14■□□□□ 0.98
C1R-205ENST00000540242 WRNQ14191 1432 aaPredicted RBP eCLIP21.14■□□□□ 0.98
C1R-205ENST00000540242 CHMP7Q8WUX9 453 aaPredicted RBP21.13■□□□□ 0.97
C1R-205ENST00000540242 ABCA10Q8WWZ4 1543 aa21.13■□□□□ 0.97
C1R-205ENST00000540242 PBRM1Q86U86 1689 aa21.1■□□□□ 0.97
C1R-205ENST00000540242 CYB5RLQ6IPT4 315 aa21.1■□□□□ 0.97
C1R-205ENST00000540242 MAGI1Q96QZ7 1491 aaPredicted RBP21.09■□□□□ 0.97
C1R-205ENST00000540242 TOP2BQ02880 1626 aa21.09■□□□□ 0.97
C1R-205ENST00000540242 ABCA5Q8WWZ7 1642 aa21.09■□□□□ 0.97
C1R-205ENST00000540242 BIVM-ERCC5R4GMW8 1640 aa21.07■□□□□ 0.96
C1R-205ENST00000540242 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
C1R-205ENST00000540242 ARAP1Q96P48 1450 aa21.07■□□□□ 0.96
C1R-205ENST00000540242 CLASP1Q7Z460 1538 aa21.04■□□□□ 0.96
C1R-205ENST00000540242 ADAMTS12P58397 1594 aa20.95■□□□□ 0.94
C1R-205ENST00000540242 GRIN2AQ12879 1464 aa20.91■□□□□ 0.94
C1R-205ENST00000540242 CEP170Q5SW79 1584 aa20.89■□□□□ 0.93
C1R-205ENST00000540242 ERCC6L2Q5T890 1561 aa20.89■□□□□ 0.93
C1R-205ENST00000540242 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
C1R-205ENST00000540242 NUP160Q12769 1436 aa20.82■□□□□ 0.92
C1R-205ENST00000540242 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
C1R-205ENST00000540242 TRHP20396 242 aaPredicted RBP20.79■□□□□ 0.92
C1R-205ENST00000540242 IGF1RP08069 1367 aa20.71■□□□□ 0.91
C1R-205ENST00000540242 KIF27Q86VH2 1401 aa20.68■□□□□ 0.9
C1R-205ENST00000540242 SHROOM2Q13796 1616 aa20.67■□□□□ 0.9
C1R-205ENST00000540242 PRG4Q92954 1404 aaPredicted RBP20.66■□□□□ 0.9
C1R-205ENST00000540242 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms