RNA–Protein interactions for RNA: ENST00000540237.1

LINC02443-202, Transcript of long intergenic non-protein coding RNA 2443, humanhuman

TSL 3

Gene LINC02443, Length 324 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02443-202ENST00000540237 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
LINC02443-202ENST00000540237 CCDC180Q9P1Z9 1646 aa14.41□□□□□ -0.1
LINC02443-202ENST00000540237 ABCC9O60706 1549 aa13.89□□□□□ -0.19
LINC02443-202ENST00000540237 ZCCHC6Q5VYS8 1495 aaKnown RBP13.55□□□□□ -0.24
LINC02443-202ENST00000540237 NACADO15069 1562 aa13.46□□□□□ -0.25
LINC02443-202ENST00000540237 RB1CC1Q8TDY2 1594 aa13.45□□□□□ -0.26
LINC02443-202ENST00000540237 MYO15BQ96JP2 1530 aa13.45□□□□□ -0.26
LINC02443-202ENST00000540237 DCAF1Q9Y4B6 1507 aa13.44□□□□□ -0.26
LINC02443-202ENST00000540237 DCAF8L2P0C7V8 631 aa13.32□□□□□ -0.28
LINC02443-202ENST00000540237 AEBP2Q6ZN18 517 aaPredicted RBP13.26□□□□□ -0.29
LINC02443-202ENST00000540237 UNC13AQ9UPW8 1703 aa13.23□□□□□ -0.29
LINC02443-202ENST00000540237 SCRIBQ14160 1630 aa13.1□□□□□ -0.31
LINC02443-202ENST00000540237 BICRAQ9NZM4 1560 aa13.08□□□□□ -0.32
LINC02443-202ENST00000540237 SHROOM4Q9ULL8 1493 aa12.95□□□□□ -0.34
LINC02443-202ENST00000540237 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINC02443-202ENST00000540237 EIF4G1Q04637 1599 aaKnown RBP12.69□□□□□ -0.38
LINC02443-202ENST00000540237 CHIC1Q5VXU3 224 aa12.62□□□□□ -0.39
LINC02443-202ENST00000540237 DNAJC5BQ9UF47 199 aa12.62□□□□□ -0.39
LINC02443-202ENST00000540237 CC2D2AQ9P2K1 1620 aa12.61□□□□□ -0.39
LINC02443-202ENST00000540237 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
LINC02443-202ENST00000540237 SMARCA4P51532 1647 aa12.57□□□□□ -0.4
LINC02443-202ENST00000540237 BAZ1AQ9NRL2 1556 aaPredicted RBP12.55□□□□□ -0.4
LINC02443-202ENST00000540237 MROH2BQ7Z745 1585 aa12.48□□□□□ -0.41
LINC02443-202ENST00000540237 PEG3Q9GZU2 1588 aa12.47□□□□□ -0.41
LINC02443-202ENST00000540237 SMARCA2P51531 1590 aa12.43□□□□□ -0.42
LINC02443-202ENST00000540237 ATAD2BQ9ULI0 1458 aa12.43□□□□□ -0.42
LINC02443-202ENST00000540237 NCAPD3P42695 1498 aa12.4□□□□□ -0.42
LINC02443-202ENST00000540237 HMGXB3Q12766 1538 aa12.4□□□□□ -0.42
LINC02443-202ENST00000540237 WIZO95785 1651 aa12.37□□□□□ -0.43
LINC02443-202ENST00000540237 RSF1Q96T23 1441 aaPredicted RBP12.37□□□□□ -0.43
LINC02443-202ENST00000540237 BAZ1BQ9UIG0 1483 aaKnown RBP12.33□□□□□ -0.44
LINC02443-202ENST00000540237 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
LINC02443-202ENST00000540237 LAMC3Q9Y6N6 1575 aa12.09□□□□□ -0.47
LINC02443-202ENST00000540237 NESP48681 1621 aa12.08□□□□□ -0.48
LINC02443-202ENST00000540237 CCDC88BA6NC98 1476 aa12.07□□□□□ -0.48
LINC02443-202ENST00000540237 SUPT5HO00267 1087 aaKnown RBP12.05□□□□□ -0.48
LINC02443-202ENST00000540237 CADPSQ9ULU8 1353 aa12.03□□□□□ -0.48
LINC02443-202ENST00000540237 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
LINC02443-202ENST00000540237 CFTRP13569 1480 aa12.01□□□□□ -0.49
LINC02443-202ENST00000540237 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
LINC02443-202ENST00000540237 PDS5BQ9NTI5 1447 aa11.94□□□□□ -0.5
LINC02443-202ENST00000540237 ERCC6Q03468 1493 aa11.94□□□□□ -0.5
LINC02443-202ENST00000540237 THOC2Q8NI27 1593 aaKnown RBP11.92□□□□□ -0.5
LINC02443-202ENST00000540237 FANCD2Q9BXW9 1451 aa11.9□□□□□ -0.5
LINC02443-202ENST00000540237 CEP164Q9UPV0 1460 aa11.88□□□□□ -0.51
LINC02443-202ENST00000540237 MRC2Q9UBG0 1479 aa11.85□□□□□ -0.51
LINC02443-202ENST00000540237 WDR62O43379 1518 aa11.83□□□□□ -0.52
LINC02443-202ENST00000540237 CUX2O14529 1486 aa11.82□□□□□ -0.52
LINC02443-202ENST00000540237 URB2Q14146 1524 aaKnown RBP11.81□□□□□ -0.52
LINC02443-202ENST00000540237 DNMBPQ6XZF7 1577 aa11.76□□□□□ -0.53
LINC02443-202ENST00000540237 TOPBP1Q92547 1522 aa11.75□□□□□ -0.53
LINC02443-202ENST00000540237 ABCC8Q09428 1581 aa11.73□□□□□ -0.53
LINC02443-202ENST00000540237 CUX1P39880 1505 aa11.7□□□□□ -0.54
LINC02443-202ENST00000540237 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
LINC02443-202ENST00000540237 TOP2BQ02880 1626 aa11.66□□□□□ -0.54
LINC02443-202ENST00000540237 SYNJ1O43426 1573 aa11.66□□□□□ -0.54
LINC02443-202ENST00000540237 POLA1P09884 1462 aaPredicted RBP11.65□□□□□ -0.54
LINC02443-202ENST00000540237 WRNQ14191 1432 aaPredicted RBP eCLIP11.65□□□□□ -0.54
LINC02443-202ENST00000540237 TARBP1Q13395 1621 aaKnown RBP11.64□□□□□ -0.55
LINC02443-202ENST00000540237 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
LINC02443-202ENST00000540237 IFT140Q96RY7 1462 aa11.63□□□□□ -0.55
LINC02443-202ENST00000540237 WDR97A6NE52 1622 aa11.62□□□□□ -0.55
LINC02443-202ENST00000540237 RAD54L2Q9Y4B4 1467 aa11.58□□□□□ -0.56
LINC02443-202ENST00000540237 EIF4G3O43432 1585 aaKnown RBP11.58□□□□□ -0.56
LINC02443-202ENST00000540237 ZNF608Q9ULD9 1512 aaPredicted RBP11.57□□□□□ -0.56
LINC02443-202ENST00000540237 SOGA1O94964 1423 aa11.56□□□□□ -0.56
LINC02443-202ENST00000540237 ABCA10Q8WWZ4 1543 aa11.55□□□□□ -0.56
LINC02443-202ENST00000540237 ABCA5Q8WWZ7 1642 aa11.52□□□□□ -0.57
LINC02443-202ENST00000540237 AQRO60306 1485 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC02443-202ENST00000540237 PBRM1Q86U86 1689 aa11.49□□□□□ -0.57
LINC02443-202ENST00000540237 TDRD9Q8NDG6 1382 aaKnown RBP11.48□□□□□ -0.57
LINC02443-202ENST00000540237 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
LINC02443-202ENST00000540237 GRIN2BQ13224 1484 aa11.44□□□□□ -0.58
LINC02443-202ENST00000540237 CHD1O14646 1710 aa11.42□□□□□ -0.58
LINC02443-202ENST00000540237 SNAPC4Q5SXM2 1469 aa11.42□□□□□ -0.58
LINC02443-202ENST00000540237 ERICH3Q5RHP9 1530 aa11.41□□□□□ -0.58
LINC02443-202ENST00000540237 MAGI1Q96QZ7 1491 aaPredicted RBP11.41□□□□□ -0.58
LINC02443-202ENST00000540237 ADAMTS12P58397 1594 aa11.4□□□□□ -0.58
LINC02443-202ENST00000540237 KIF27Q86VH2 1401 aa11.37□□□□□ -0.59
LINC02443-202ENST00000540237 TRIM41Q8WV44 630 aa11.36□□□□□ -0.59
LINC02443-202ENST00000540237 SYNJ2O15056 1496 aa11.36□□□□□ -0.59
LINC02443-202ENST00000540237 CUL7Q14999 1698 aa11.35□□□□□ -0.59
LINC02443-202ENST00000540237 SENP3Q9H4L4 574 aaPredicted RBP11.34□□□□□ -0.59
LINC02443-202ENST00000540237 RUSC2Q8N2Y8 1516 aa11.34□□□□□ -0.59
LINC02443-202ENST00000540237 FHAD1B1AJZ9 1412 aa11.33□□□□□ -0.6
LINC02443-202ENST00000540237 IGF1RP08069 1367 aa11.31□□□□□ -0.6
LINC02443-202ENST00000540237 GRIN2AQ12879 1464 aa11.31□□□□□ -0.6
LINC02443-202ENST00000540237 CLASP1Q7Z460 1538 aa11.29□□□□□ -0.6
LINC02443-202ENST00000540237 OSCARQ8IYS5 282 aa11.27□□□□□ -0.61
LINC02443-202ENST00000540237 CHMP7Q8WUX9 453 aaPredicted RBP11.27□□□□□ -0.61
LINC02443-202ENST00000540237 CEP170Q5SW79 1584 aa11.27□□□□□ -0.61
LINC02443-202ENST00000540237 DNAJC5Q9H3Z4 198 aa11.26□□□□□ -0.61
LINC02443-202ENST00000540237 NUP160Q12769 1436 aa11.26□□□□□ -0.61
LINC02443-202ENST00000540237 EEA1Q15075 1411 aa11.26□□□□□ -0.61
LINC02443-202ENST00000540237 FBLN2P98095 1184 aa11.25□□□□□ -0.61
LINC02443-202ENST00000540237 CARMIL1Q5VZK9 1371 aa11.24□□□□□ -0.61
LINC02443-202ENST00000540237 PRXQ9BXM0 1461 aa11.23□□□□□ -0.61
LINC02443-202ENST00000540237 RAPGEF2Q9Y4G8 1499 aa11.21□□□□□ -0.61
LINC02443-202ENST00000540237 SHROOM2Q13796 1616 aa11.2□□□□□ -0.62
LINC02443-202ENST00000540237 PHF23Q9BUL5 403 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms