RNA–Protein interactions for RNA: ENST00000540191.1

KDM2B-211, Transcript of lysine demethylase 2B, humanhuman

TSL 4

Gene KDM2B, Length 574 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-211ENST00000540191 NISCHQ9Y2I1 1504 aa23.33■■□□□ 1.33
KDM2B-211ENST00000540191 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
KDM2B-211ENST00000540191 ABCC9O60706 1549 aa20.75■□□□□ 0.91
KDM2B-211ENST00000540191 RB1CC1Q8TDY2 1594 aa19.85■□□□□ 0.77
KDM2B-211ENST00000540191 NACADO15069 1562 aa19.74■□□□□ 0.75
KDM2B-211ENST00000540191 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
KDM2B-211ENST00000540191 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
KDM2B-211ENST00000540191 DCAF8L2P0C7V8 631 aa19.44■□□□□ 0.7
KDM2B-211ENST00000540191 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
KDM2B-211ENST00000540191 BICRAQ9NZM4 1560 aa19.31■□□□□ 0.68
KDM2B-211ENST00000540191 DCAF1Q9Y4B6 1507 aa19.3■□□□□ 0.68
KDM2B-211ENST00000540191 DNAJC5BQ9UF47 199 aa19.29■□□□□ 0.68
KDM2B-211ENST00000540191 PABPN1Q86U42 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
KDM2B-211ENST00000540191 SCRIBQ14160 1630 aa19.1■□□□□ 0.65
KDM2B-211ENST00000540191 SHROOM4Q9ULL8 1493 aa19.04■□□□□ 0.64
KDM2B-211ENST00000540191 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
KDM2B-211ENST00000540191 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
KDM2B-211ENST00000540191 CECR2Q9BXF3 1484 aa18.68■□□□□ 0.58
KDM2B-211ENST00000540191 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
KDM2B-211ENST00000540191 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
KDM2B-211ENST00000540191 ATAD2BQ9ULI0 1458 aa18.15■□□□□ 0.5
KDM2B-211ENST00000540191 HMGXB3Q12766 1538 aa18.13■□□□□ 0.49
KDM2B-211ENST00000540191 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
KDM2B-211ENST00000540191 BAZ1AQ9NRL2 1556 aaPredicted RBP18.12■□□□□ 0.49
KDM2B-211ENST00000540191 PEG3Q9GZU2 1588 aa18.06■□□□□ 0.48
KDM2B-211ENST00000540191 BAZ1BQ9UIG0 1483 aaKnown RBP17.99■□□□□ 0.47
KDM2B-211ENST00000540191 MROH2BQ7Z745 1585 aa17.99■□□□□ 0.47
KDM2B-211ENST00000540191 ERCC6Q03468 1493 aa17.89■□□□□ 0.45
KDM2B-211ENST00000540191 NESP48681 1621 aa17.88■□□□□ 0.45
KDM2B-211ENST00000540191 CUX2O14529 1486 aa17.86■□□□□ 0.45
KDM2B-211ENST00000540191 WIZO95785 1651 aa17.82■□□□□ 0.44
KDM2B-211ENST00000540191 LAMC3Q9Y6N6 1575 aa17.81■□□□□ 0.44
KDM2B-211ENST00000540191 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
KDM2B-211ENST00000540191 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.43
KDM2B-211ENST00000540191 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
KDM2B-211ENST00000540191 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
KDM2B-211ENST00000540191 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
KDM2B-211ENST00000540191 TOP2AP11388 1531 aaKnown RBP17.59■□□□□ 0.41
KDM2B-211ENST00000540191 CADPSQ9ULU8 1353 aa17.59■□□□□ 0.41
KDM2B-211ENST00000540191 WDR62O43379 1518 aa17.52■□□□□ 0.39
KDM2B-211ENST00000540191 MRC2Q9UBG0 1479 aa17.51■□□□□ 0.39
KDM2B-211ENST00000540191 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
KDM2B-211ENST00000540191 CFTRP13569 1480 aa17.46■□□□□ 0.39
KDM2B-211ENST00000540191 CEP164Q9UPV0 1460 aa17.46■□□□□ 0.39
KDM2B-211ENST00000540191 FANCD2Q9BXW9 1451 aa17.44■□□□□ 0.38
KDM2B-211ENST00000540191 URB2Q14146 1524 aaKnown RBP17.32■□□□□ 0.36
KDM2B-211ENST00000540191 CCDC88BA6NC98 1476 aa17.32■□□□□ 0.36
KDM2B-211ENST00000540191 TOPBP1Q92547 1522 aa17.15■□□□□ 0.34
KDM2B-211ENST00000540191 DNMBPQ6XZF7 1577 aa17.13■□□□□ 0.33
KDM2B-211ENST00000540191 IFT140Q96RY7 1462 aa17.1■□□□□ 0.33
KDM2B-211ENST00000540191 ABCC8Q09428 1581 aa17.07■□□□□ 0.32
KDM2B-211ENST00000540191 ZNF608Q9ULD9 1512 aaPredicted RBP17.07■□□□□ 0.32
KDM2B-211ENST00000540191 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
KDM2B-211ENST00000540191 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
KDM2B-211ENST00000540191 POLA1P09884 1462 aaPredicted RBP16.98■□□□□ 0.31
KDM2B-211ENST00000540191 CHD1O14646 1710 aa16.95■□□□□ 0.3
KDM2B-211ENST00000540191 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
KDM2B-211ENST00000540191 CUX1P39880 1505 aa16.91■□□□□ 0.3
KDM2B-211ENST00000540191 WDR97A6NE52 1622 aa16.89■□□□□ 0.29
KDM2B-211ENST00000540191 FGD5Q6ZNL6 1462 aa16.89■□□□□ 0.29
KDM2B-211ENST00000540191 RIMBP3CA6NJZ7 1639 aa16.88■□□□□ 0.29
KDM2B-211ENST00000540191 RIMBP3BA6NNM3 1639 aa16.88■□□□□ 0.29
KDM2B-211ENST00000540191 RIMBP3Q9UFD9 1639 aa16.88■□□□□ 0.29
KDM2B-211ENST00000540191 AQRO60306 1485 aaKnown RBP eCLIP16.88■□□□□ 0.29
KDM2B-211ENST00000540191 RAD54L2Q9Y4B4 1467 aa16.88■□□□□ 0.29
KDM2B-211ENST00000540191 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
KDM2B-211ENST00000540191 SOGA1O94964 1423 aa16.81■□□□□ 0.28
KDM2B-211ENST00000540191 ARHGEF11O15085 1522 aa16.8■□□□□ 0.28
KDM2B-211ENST00000540191 SUPT5HO00267 1087 aaKnown RBP16.8■□□□□ 0.28
KDM2B-211ENST00000540191 PBRM1Q86U86 1689 aa16.8■□□□□ 0.28
KDM2B-211ENST00000540191 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.28
KDM2B-211ENST00000540191 SNAPC4Q5SXM2 1469 aa16.77■□□□□ 0.28
KDM2B-211ENST00000540191 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
KDM2B-211ENST00000540191 BIVM-ERCC5R4GMW8 1640 aa16.73■□□□□ 0.27
KDM2B-211ENST00000540191 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
KDM2B-211ENST00000540191 GRIN2BQ13224 1484 aa16.71■□□□□ 0.27
KDM2B-211ENST00000540191 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
KDM2B-211ENST00000540191 ABCA10Q8WWZ4 1543 aa16.7■□□□□ 0.26
KDM2B-211ENST00000540191 TOP2BQ02880 1626 aa16.69■□□□□ 0.26
KDM2B-211ENST00000540191 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
KDM2B-211ENST00000540191 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
KDM2B-211ENST00000540191 SYNJ2O15056 1496 aa16.66■□□□□ 0.26
KDM2B-211ENST00000540191 FBLN2P98095 1184 aa16.65■□□□□ 0.26
KDM2B-211ENST00000540191 ARAP1Q96P48 1450 aa16.65■□□□□ 0.26
KDM2B-211ENST00000540191 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
KDM2B-211ENST00000540191 ADAMTS12P58397 1594 aa16.61■□□□□ 0.25
KDM2B-211ENST00000540191 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
KDM2B-211ENST00000540191 GRIN2AQ12879 1464 aa16.53■□□□□ 0.24
KDM2B-211ENST00000540191 CYB5RLQ6IPT4 315 aa16.52■□□□□ 0.24
KDM2B-211ENST00000540191 CEP170Q5SW79 1584 aa16.51■□□□□ 0.23
KDM2B-211ENST00000540191 ERICH3Q5RHP9 1530 aa16.5■□□□□ 0.23
KDM2B-211ENST00000540191 NUP160Q12769 1436 aa16.46■□□□□ 0.23
KDM2B-211ENST00000540191 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
KDM2B-211ENST00000540191 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
KDM2B-211ENST00000540191 ERCC6L2Q5T890 1561 aa16.44■□□□□ 0.22
KDM2B-211ENST00000540191 RUSC2Q8N2Y8 1516 aa16.38■□□□□ 0.21
KDM2B-211ENST00000540191 CUL7Q14999 1698 aa16.34■□□□□ 0.21
KDM2B-211ENST00000540191 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
KDM2B-211ENST00000540191 KIF27Q86VH2 1401 aa16.28■□□□□ 0.2
KDM2B-211ENST00000540191 PRG4Q92954 1404 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms