RNA–Protein interactions for RNA: ENST00000540168.1

KDM5A-206, Transcript of lysine demethylase 5A, humanhuman

TSL 5

Gene KDM5A, Length 523 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-206ENST00000540168 NISCHQ9Y2I1 1504 aa17.13■□□□□ 0.33
KDM5A-206ENST00000540168 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.03
KDM5A-206ENST00000540168 ABCC9O60706 1549 aa14.47□□□□□ -0.09
KDM5A-206ENST00000540168 ZCCHC6Q5VYS8 1495 aaKnown RBP14.36□□□□□ -0.11
KDM5A-206ENST00000540168 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
KDM5A-206ENST00000540168 MYO15BQ96JP2 1530 aa14.19□□□□□ -0.14
KDM5A-206ENST00000540168 NACADO15069 1562 aa14.16□□□□□ -0.14
KDM5A-206ENST00000540168 RB1CC1Q8TDY2 1594 aa14.11□□□□□ -0.15
KDM5A-206ENST00000540168 DCAF8L2P0C7V8 631 aa13.97□□□□□ -0.17
KDM5A-206ENST00000540168 UNC13AQ9UPW8 1703 aa13.92□□□□□ -0.18
KDM5A-206ENST00000540168 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
KDM5A-206ENST00000540168 BICRAQ9NZM4 1560 aa13.71□□□□□ -0.21
KDM5A-206ENST00000540168 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
KDM5A-206ENST00000540168 AEBP2Q6ZN18 517 aaPredicted RBP13.54□□□□□ -0.24
KDM5A-206ENST00000540168 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
KDM5A-206ENST00000540168 EIF4G1Q04637 1599 aaKnown RBP13.29□□□□□ -0.28
KDM5A-206ENST00000540168 CECR2Q9BXF3 1484 aa13.28□□□□□ -0.28
KDM5A-206ENST00000540168 SMARCA4P51532 1647 aa13.28□□□□□ -0.28
KDM5A-206ENST00000540168 BAZ1AQ9NRL2 1556 aaPredicted RBP13.27□□□□□ -0.29
KDM5A-206ENST00000540168 MROH2BQ7Z745 1585 aa13.2□□□□□ -0.3
KDM5A-206ENST00000540168 CC2D2AQ9P2K1 1620 aa13.17□□□□□ -0.3
KDM5A-206ENST00000540168 PEG3Q9GZU2 1588 aa13.16□□□□□ -0.3
KDM5A-206ENST00000540168 SUPT5HO00267 1087 aaKnown RBP13.14□□□□□ -0.31
KDM5A-206ENST00000540168 RSF1Q96T23 1441 aaPredicted RBP13.11□□□□□ -0.31
KDM5A-206ENST00000540168 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
KDM5A-206ENST00000540168 WIZO95785 1651 aa13.1□□□□□ -0.31
KDM5A-206ENST00000540168 ATAD2BQ9ULI0 1458 aa13.07□□□□□ -0.32
KDM5A-206ENST00000540168 HMGXB3Q12766 1538 aa13.06□□□□□ -0.32
KDM5A-206ENST00000540168 NCAPD3P42695 1498 aa13.02□□□□□ -0.33
KDM5A-206ENST00000540168 CHIC1Q5VXU3 224 aa12.99□□□□□ -0.33
KDM5A-206ENST00000540168 TOP2AP11388 1531 aaKnown RBP12.98□□□□□ -0.33
KDM5A-206ENST00000540168 BAZ1BQ9UIG0 1483 aaKnown RBP12.97□□□□□ -0.33
KDM5A-206ENST00000540168 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
KDM5A-206ENST00000540168 CCDC88BA6NC98 1476 aa12.77□□□□□ -0.37
KDM5A-206ENST00000540168 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
KDM5A-206ENST00000540168 LAMC3Q9Y6N6 1575 aa12.69□□□□□ -0.38
KDM5A-206ENST00000540168 CFTRP13569 1480 aa12.65□□□□□ -0.38
KDM5A-206ENST00000540168 NESP48681 1621 aa12.62□□□□□ -0.39
KDM5A-206ENST00000540168 CADPSQ9ULU8 1353 aa12.62□□□□□ -0.39
KDM5A-206ENST00000540168 KIF21AQ7Z4S6 1674 aa12.58□□□□□ -0.4
KDM5A-206ENST00000540168 PDS5BQ9NTI5 1447 aa12.51□□□□□ -0.41
KDM5A-206ENST00000540168 FANCD2Q9BXW9 1451 aa12.51□□□□□ -0.41
KDM5A-206ENST00000540168 CEP164Q9UPV0 1460 aa12.48□□□□□ -0.41
KDM5A-206ENST00000540168 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
KDM5A-206ENST00000540168 ERCC6Q03468 1493 aa12.44□□□□□ -0.42
KDM5A-206ENST00000540168 ABCC8Q09428 1581 aa12.42□□□□□ -0.42
KDM5A-206ENST00000540168 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
KDM5A-206ENST00000540168 BIVM-ERCC5R4GMW8 1640 aa12.4□□□□□ -0.42
KDM5A-206ENST00000540168 MRC2Q9UBG0 1479 aa12.4□□□□□ -0.42
KDM5A-206ENST00000540168 DNMBPQ6XZF7 1577 aa12.4□□□□□ -0.42
KDM5A-206ENST00000540168 WDR62O43379 1518 aa12.4□□□□□ -0.42
KDM5A-206ENST00000540168 URB2Q14146 1524 aaKnown RBP12.39□□□□□ -0.43
KDM5A-206ENST00000540168 CUX1P39880 1505 aa12.38□□□□□ -0.43
KDM5A-206ENST00000540168 SYNJ1O43426 1573 aa12.38□□□□□ -0.43
KDM5A-206ENST00000540168 WRNQ14191 1432 aaPredicted RBP eCLIP12.37□□□□□ -0.43
KDM5A-206ENST00000540168 TOP2BQ02880 1626 aa12.37□□□□□ -0.43
KDM5A-206ENST00000540168 TOPBP1Q92547 1522 aa12.36□□□□□ -0.43
KDM5A-206ENST00000540168 WDR97A6NE52 1622 aa12.29□□□□□ -0.44
KDM5A-206ENST00000540168 CUX2O14529 1486 aa12.27□□□□□ -0.45
KDM5A-206ENST00000540168 POLA1P09884 1462 aaPredicted RBP12.27□□□□□ -0.45
KDM5A-206ENST00000540168 FGD5Q6ZNL6 1462 aa12.27□□□□□ -0.45
KDM5A-206ENST00000540168 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
KDM5A-206ENST00000540168 EEA1Q15075 1411 aa12.23□□□□□ -0.45
KDM5A-206ENST00000540168 IFT140Q96RY7 1462 aa12.19□□□□□ -0.46
KDM5A-206ENST00000540168 ABCA10Q8WWZ4 1543 aa12.18□□□□□ -0.46
KDM5A-206ENST00000540168 RAD54L2Q9Y4B4 1467 aa12.17□□□□□ -0.46
KDM5A-206ENST00000540168 ABCA5Q8WWZ7 1642 aa12.17□□□□□ -0.46
KDM5A-206ENST00000540168 SOGA1O94964 1423 aa12.16□□□□□ -0.46
KDM5A-206ENST00000540168 EIF4G3O43432 1585 aaKnown RBP12.16□□□□□ -0.46
KDM5A-206ENST00000540168 PBRM1Q86U86 1689 aa12.14□□□□□ -0.47
KDM5A-206ENST00000540168 ZNF608Q9ULD9 1512 aaPredicted RBP12.11□□□□□ -0.47
KDM5A-206ENST00000540168 FAM9AQ8IZU1 332 aaPredicted RBP12.11□□□□□ -0.47
KDM5A-206ENST00000540168 KIF27Q86VH2 1401 aa12.1□□□□□ -0.47
KDM5A-206ENST00000540168 KIF21BO75037 1637 aa12.08□□□□□ -0.48
KDM5A-206ENST00000540168 RUSC2Q8N2Y8 1516 aa12.07□□□□□ -0.48
KDM5A-206ENST00000540168 CSRNP3Q8WYN3 585 aa12.07□□□□□ -0.48
KDM5A-206ENST00000540168 GAPVD1Q14C86 1478 aa12.06□□□□□ -0.48
KDM5A-206ENST00000540168 ERICH3Q5RHP9 1530 aa12.06□□□□□ -0.48
KDM5A-206ENST00000540168 CUL7Q14999 1698 aa12.04□□□□□ -0.48
KDM5A-206ENST00000540168 AQRO60306 1485 aaKnown RBP eCLIP12.04□□□□□ -0.48
KDM5A-206ENST00000540168 TDRD9Q8NDG6 1382 aaKnown RBP12.04□□□□□ -0.48
KDM5A-206ENST00000540168 GRIN2BQ13224 1484 aa12.03□□□□□ -0.48
KDM5A-206ENST00000540168 GOLGA3Q08378 1498 aa12.02□□□□□ -0.48
KDM5A-206ENST00000540168 ADAMTS12P58397 1594 aa12.02□□□□□ -0.49
KDM5A-206ENST00000540168 LOC105371045A0A1W2PR82 267 aa12.02□□□□□ -0.49
KDM5A-206ENST00000540168 MAGI1Q96QZ7 1491 aaPredicted RBP12□□□□□ -0.49
KDM5A-206ENST00000540168 CHD1O14646 1710 aa11.98□□□□□ -0.49
KDM5A-206ENST00000540168 SNAPC4Q5SXM2 1469 aa11.98□□□□□ -0.49
KDM5A-206ENST00000540168 PRXQ9BXM0 1461 aa11.97□□□□□ -0.49
KDM5A-206ENST00000540168 IGF1RP08069 1367 aa11.95□□□□□ -0.5
KDM5A-206ENST00000540168 TNIKQ9UKE5 1360 aa11.94□□□□□ -0.5
KDM5A-206ENST00000540168 SYNJ2O15056 1496 aa11.93□□□□□ -0.5
KDM5A-206ENST00000540168 FHAD1B1AJZ9 1412 aa11.93□□□□□ -0.5
KDM5A-206ENST00000540168 RAPGEF2Q9Y4G8 1499 aa11.92□□□□□ -0.5
KDM5A-206ENST00000540168 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.5
KDM5A-206ENST00000540168 GRIN2AQ12879 1464 aa11.89□□□□□ -0.51
KDM5A-206ENST00000540168 UBTFP17480 764 aaKnown RBP11.89□□□□□ -0.51
KDM5A-206ENST00000540168 CTTNBP2Q8WZ74 1663 aa11.89□□□□□ -0.51
KDM5A-206ENST00000540168 EHMT2Q96KQ7 1210 aa11.88□□□□□ -0.51
KDM5A-206ENST00000540168 CEP162Q5TB80 1403 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms