RNA–Protein interactions for RNA: ENST00000540156.1

KDM5A-205, Transcript of lysine demethylase 5A, humanhuman

TSL 3

Gene KDM5A, Length 516 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-205ENST00000540156 NISCHQ9Y2I1 1504 aa16.68■□□□□ 0.26
KDM5A-205ENST00000540156 ABCC9O60706 1549 aa15.94■□□□□ 0.14
KDM5A-205ENST00000540156 DNAJC5BQ9UF47 199 aa15.57■□□□□ 0.08
KDM5A-205ENST00000540156 CCDC180Q9P1Z9 1646 aa15.24■□□□□ 0.03
KDM5A-205ENST00000540156 RB1CC1Q8TDY2 1594 aa14.85□□□□□ -0.03
KDM5A-205ENST00000540156 PABPN1Q86U42 306 aaKnown RBP eCLIP14.77□□□□□ -0.05
KDM5A-205ENST00000540156 DNAJC5Q9H3Z4 198 aa14.75□□□□□ -0.05
KDM5A-205ENST00000540156 UNC13AQ9UPW8 1703 aa14.58□□□□□ -0.08
KDM5A-205ENST00000540156 NACADO15069 1562 aa14.56□□□□□ -0.08
KDM5A-205ENST00000540156 DCAF8L2P0C7V8 631 aa14.47□□□□□ -0.09
KDM5A-205ENST00000540156 BICRAQ9NZM4 1560 aa14.45□□□□□ -0.1
KDM5A-205ENST00000540156 CECR2Q9BXF3 1484 aa14.41□□□□□ -0.1
KDM5A-205ENST00000540156 CC2D2AQ9P2K1 1620 aa14.36□□□□□ -0.11
KDM5A-205ENST00000540156 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
KDM5A-205ENST00000540156 SHROOM4Q9ULL8 1493 aa14.1□□□□□ -0.15
KDM5A-205ENST00000540156 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
KDM5A-205ENST00000540156 CUX2O14529 1486 aa13.96□□□□□ -0.17
KDM5A-205ENST00000540156 SCRIBQ14160 1630 aa13.9□□□□□ -0.19
KDM5A-205ENST00000540156 TRIM41Q8WV44 630 aa13.89□□□□□ -0.19
KDM5A-205ENST00000540156 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
KDM5A-205ENST00000540156 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
KDM5A-205ENST00000540156 ZCCHC6Q5VYS8 1495 aaKnown RBP13.66□□□□□ -0.22
KDM5A-205ENST00000540156 NESP48681 1621 aa13.51□□□□□ -0.25
KDM5A-205ENST00000540156 THOC2Q8NI27 1593 aaKnown RBP13.47□□□□□ -0.25
KDM5A-205ENST00000540156 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
KDM5A-205ENST00000540156 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
KDM5A-205ENST00000540156 ATAD2BQ9ULI0 1458 aa13.34□□□□□ -0.27
KDM5A-205ENST00000540156 KIF21AQ7Z4S6 1674 aa13.32□□□□□ -0.28
KDM5A-205ENST00000540156 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
KDM5A-205ENST00000540156 BAZ1AQ9NRL2 1556 aaPredicted RBP13.27□□□□□ -0.29
KDM5A-205ENST00000540156 LAMC3Q9Y6N6 1575 aa13.27□□□□□ -0.29
KDM5A-205ENST00000540156 OSCARQ8IYS5 282 aa13.26□□□□□ -0.29
KDM5A-205ENST00000540156 AEBP2Q6ZN18 517 aaPredicted RBP13.22□□□□□ -0.29
KDM5A-205ENST00000540156 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
KDM5A-205ENST00000540156 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
KDM5A-205ENST00000540156 RIMBP3CA6NJZ7 1639 aa13.17□□□□□ -0.3
KDM5A-205ENST00000540156 RIMBP3BA6NNM3 1639 aa13.17□□□□□ -0.3
KDM5A-205ENST00000540156 SMARCA4P51532 1647 aa13.17□□□□□ -0.3
KDM5A-205ENST00000540156 RIMBP3Q9UFD9 1639 aa13.17□□□□□ -0.3
KDM5A-205ENST00000540156 MRC2Q9UBG0 1479 aa13.14□□□□□ -0.31
KDM5A-205ENST00000540156 WDR62O43379 1518 aa13.13□□□□□ -0.31
KDM5A-205ENST00000540156 TRHP20396 242 aaPredicted RBP13.11□□□□□ -0.31
KDM5A-205ENST00000540156 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
KDM5A-205ENST00000540156 CYB5RLQ6IPT4 315 aa13.03□□□□□ -0.32
KDM5A-205ENST00000540156 CADPSQ9ULU8 1353 aa13.03□□□□□ -0.32
KDM5A-205ENST00000540156 PEG3Q9GZU2 1588 aa13□□□□□ -0.33
KDM5A-205ENST00000540156 CEP164Q9UPV0 1460 aa12.96□□□□□ -0.34
KDM5A-205ENST00000540156 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
KDM5A-205ENST00000540156 MROH2BQ7Z745 1585 aa12.86□□□□□ -0.35
KDM5A-205ENST00000540156 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
KDM5A-205ENST00000540156 URB2Q14146 1524 aaKnown RBP12.83□□□□□ -0.36
KDM5A-205ENST00000540156 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
KDM5A-205ENST00000540156 ILDR1Q86SU0 546 aaPredicted RBP12.76□□□□□ -0.37
KDM5A-205ENST00000540156 CHD1O14646 1710 aa12.75□□□□□ -0.37
KDM5A-205ENST00000540156 CFTRP13569 1480 aa12.73□□□□□ -0.37
KDM5A-205ENST00000540156 IFT140Q96RY7 1462 aa12.72□□□□□ -0.37
KDM5A-205ENST00000540156 WIZO95785 1651 aa12.71□□□□□ -0.37
KDM5A-205ENST00000540156 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.38
KDM5A-205ENST00000540156 FBLN2P98095 1184 aa12.69□□□□□ -0.38
KDM5A-205ENST00000540156 EIF4G3O43432 1585 aaKnown RBP12.68□□□□□ -0.38
KDM5A-205ENST00000540156 AQRO60306 1485 aaKnown RBP eCLIP12.61□□□□□ -0.39
KDM5A-205ENST00000540156 PRDM2Q13029 1718 aa12.59□□□□□ -0.39
KDM5A-205ENST00000540156 TOPBP1Q92547 1522 aa12.57□□□□□ -0.4
KDM5A-205ENST00000540156 CLASP1Q7Z460 1538 aa12.53□□□□□ -0.4
KDM5A-205ENST00000540156 TARBP1Q13395 1621 aaKnown RBP12.51□□□□□ -0.41
KDM5A-205ENST00000540156 SYNJ1O43426 1573 aa12.47□□□□□ -0.41
KDM5A-205ENST00000540156 ABCC8Q09428 1581 aa12.47□□□□□ -0.41
KDM5A-205ENST00000540156 GAPVD1Q14C86 1478 aa12.47□□□□□ -0.41
KDM5A-205ENST00000540156 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.41
KDM5A-205ENST00000540156 DNMBPQ6XZF7 1577 aa12.46□□□□□ -0.42
KDM5A-205ENST00000540156 TOP2AP11388 1531 aaKnown RBP12.44□□□□□ -0.42
KDM5A-205ENST00000540156 KDM4FA0A1W2PPD8 638 aa12.44□□□□□ -0.42
KDM5A-205ENST00000540156 SNAPC4Q5SXM2 1469 aa12.43□□□□□ -0.42
KDM5A-205ENST00000540156 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
KDM5A-205ENST00000540156 KIF13AQ9H1H9 1805 aa12.41□□□□□ -0.42
KDM5A-205ENST00000540156 RAD54L2Q9Y4B4 1467 aa12.4□□□□□ -0.42
KDM5A-205ENST00000540156 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.43
KDM5A-205ENST00000540156 SOGA1O94964 1423 aa12.35□□□□□ -0.43
KDM5A-205ENST00000540156 CCDC88BA6NC98 1476 aa12.34□□□□□ -0.43
KDM5A-205ENST00000540156 MAGI1Q96QZ7 1491 aaPredicted RBP12.34□□□□□ -0.43
KDM5A-205ENST00000540156 ERCC6L2Q5T890 1561 aa12.34□□□□□ -0.43
KDM5A-205ENST00000540156 SYNJ2O15056 1496 aa12.33□□□□□ -0.44
KDM5A-205ENST00000540156 GRIN2BQ13224 1484 aa12.29□□□□□ -0.44
KDM5A-205ENST00000540156 WDR97A6NE52 1622 aa12.29□□□□□ -0.44
KDM5A-205ENST00000540156 FAM69CQ0P6D2 419 aa12.27□□□□□ -0.45
KDM5A-205ENST00000540156 KDM6BO15054 1643 aa12.25□□□□□ -0.45
KDM5A-205ENST00000540156 PBRM1Q86U86 1689 aa12.24□□□□□ -0.45
KDM5A-205ENST00000540156 FGD5Q6ZNL6 1462 aa12.23□□□□□ -0.45
KDM5A-205ENST00000540156 CEP170Q5SW79 1584 aa12.22□□□□□ -0.45
KDM5A-205ENST00000540156 HECW2Q9P2P5 1572 aa12.21□□□□□ -0.46
KDM5A-205ENST00000540156 TSPOAP1O95153 1857 aa12.21□□□□□ -0.46
KDM5A-205ENST00000540156 ABCC10Q5T3U5 1492 aa12.21□□□□□ -0.46
KDM5A-205ENST00000540156 FBXO41Q8TF61 875 aa12.19□□□□□ -0.46
KDM5A-205ENST00000540156 DIP2BQ9P265 1576 aa12.16□□□□□ -0.46
KDM5A-205ENST00000540156 ADGRL1O94910 1474 aa12.15□□□□□ -0.46
KDM5A-205ENST00000540156 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
KDM5A-205ENST00000540156 SHROOM2Q13796 1616 aa12.14□□□□□ -0.47
KDM5A-205ENST00000540156 GRIN2AQ12879 1464 aa12.14□□□□□ -0.47
KDM5A-205ENST00000540156 CUX1P39880 1505 aa12.11□□□□□ -0.47
KDM5A-205ENST00000540156 MAPKBP1O60336 1514 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms