RNA–Protein interactions for RNA: ENST00000540101.2

C16orf62-211, Transcript of UPF0505 protein C16orf62, humanhuman

TSL 3

Gene C16orf62, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf62-211ENST00000540101 NISCHQ9Y2I1 1504 aa18.6■□□□□ 0.57
C16orf62-211ENST00000540101 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
C16orf62-211ENST00000540101 ABCC9O60706 1549 aa16.31■□□□□ 0.2
C16orf62-211ENST00000540101 ZCCHC6Q5VYS8 1495 aaKnown RBP15.59■□□□□ 0.09
C16orf62-211ENST00000540101 RB1CC1Q8TDY2 1594 aa15.48■□□□□ 0.07
C16orf62-211ENST00000540101 DCAF1Q9Y4B6 1507 aa15.44■□□□□ 0.06
C16orf62-211ENST00000540101 MYO15BQ96JP2 1530 aa15.39■□□□□ 0.05
C16orf62-211ENST00000540101 NACADO15069 1562 aa15.36■□□□□ 0.05
C16orf62-211ENST00000540101 DNAJC5BQ9UF47 199 aa15.34■□□□□ 0.05
C16orf62-211ENST00000540101 DCAF8L2P0C7V8 631 aa15.31■□□□□ 0.04
C16orf62-211ENST00000540101 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
C16orf62-211ENST00000540101 UNC13AQ9UPW8 1703 aa15.1■□□□□ 0.01
C16orf62-211ENST00000540101 BICRAQ9NZM4 1560 aa15.05■□□□□ -0
C16orf62-211ENST00000540101 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
C16orf62-211ENST00000540101 SHROOM4Q9ULL8 1493 aa14.82□□□□□ -0.04
C16orf62-211ENST00000540101 CC2D2AQ9P2K1 1620 aa14.71□□□□□ -0.05
C16orf62-211ENST00000540101 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
C16orf62-211ENST00000540101 EIF4G1Q04637 1599 aaKnown RBP14.68□□□□□ -0.06
C16orf62-211ENST00000540101 BAZ1AQ9NRL2 1556 aaPredicted RBP14.37□□□□□ -0.11
C16orf62-211ENST00000540101 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
C16orf62-211ENST00000540101 SMARCA4P51532 1647 aa14.33□□□□□ -0.11
C16orf62-211ENST00000540101 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
C16orf62-211ENST00000540101 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
C16orf62-211ENST00000540101 ATAD2BQ9ULI0 1458 aa14.21□□□□□ -0.13
C16orf62-211ENST00000540101 NCAPD3P42695 1498 aa14.2□□□□□ -0.14
C16orf62-211ENST00000540101 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
C16orf62-211ENST00000540101 WIZO95785 1651 aa14.14□□□□□ -0.15
C16orf62-211ENST00000540101 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
C16orf62-211ENST00000540101 SUPT5HO00267 1087 aaKnown RBP14.08□□□□□ -0.16
C16orf62-211ENST00000540101 DNAJC5Q9H3Z4 198 aa14.08□□□□□ -0.16
C16orf62-211ENST00000540101 ERCC6Q03468 1493 aa14.07□□□□□ -0.16
C16orf62-211ENST00000540101 BAZ1BQ9UIG0 1483 aaKnown RBP14.07□□□□□ -0.16
C16orf62-211ENST00000540101 TOP2AP11388 1531 aaKnown RBP14.06□□□□□ -0.16
C16orf62-211ENST00000540101 CUX2O14529 1486 aa14.04□□□□□ -0.16
C16orf62-211ENST00000540101 NESP48681 1621 aa14.01□□□□□ -0.17
C16orf62-211ENST00000540101 CCDC88BA6NC98 1476 aa13.89□□□□□ -0.19
C16orf62-211ENST00000540101 LAMC3Q9Y6N6 1575 aa13.87□□□□□ -0.19
C16orf62-211ENST00000540101 THOC2Q8NI27 1593 aaKnown RBP13.85□□□□□ -0.19
C16orf62-211ENST00000540101 PDS5BQ9NTI5 1447 aa13.8□□□□□ -0.2
C16orf62-211ENST00000540101 KIF21AQ7Z4S6 1674 aa13.79□□□□□ -0.2
C16orf62-211ENST00000540101 CADPSQ9ULU8 1353 aa13.77□□□□□ -0.21
C16orf62-211ENST00000540101 CFTRP13569 1480 aa13.76□□□□□ -0.21
C16orf62-211ENST00000540101 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
C16orf62-211ENST00000540101 WDR62O43379 1518 aa13.65□□□□□ -0.22
C16orf62-211ENST00000540101 CEP164Q9UPV0 1460 aa13.63□□□□□ -0.23
C16orf62-211ENST00000540101 FANCD2Q9BXW9 1451 aa13.62□□□□□ -0.23
C16orf62-211ENST00000540101 URB2Q14146 1524 aaKnown RBP13.52□□□□□ -0.25
C16orf62-211ENST00000540101 PRDM2Q13029 1718 aa13.51□□□□□ -0.25
C16orf62-211ENST00000540101 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
C16orf62-211ENST00000540101 ABCC8Q09428 1581 aa13.46□□□□□ -0.25
C16orf62-211ENST00000540101 WRNQ14191 1432 aaPredicted RBP eCLIP13.46□□□□□ -0.26
C16orf62-211ENST00000540101 CUX1P39880 1505 aa13.44□□□□□ -0.26
C16orf62-211ENST00000540101 SYNJ1O43426 1573 aa13.41□□□□□ -0.26
C16orf62-211ENST00000540101 TOPBP1Q92547 1522 aa13.4□□□□□ -0.26
C16orf62-211ENST00000540101 CHIC1Q5VXU3 224 aa13.4□□□□□ -0.26
C16orf62-211ENST00000540101 DNMBPQ6XZF7 1577 aa13.4□□□□□ -0.26
C16orf62-211ENST00000540101 OSCARQ8IYS5 282 aa13.39□□□□□ -0.27
C16orf62-211ENST00000540101 TOP2BQ02880 1626 aa13.38□□□□□ -0.27
C16orf62-211ENST00000540101 ZNF608Q9ULD9 1512 aaPredicted RBP13.36□□□□□ -0.27
C16orf62-211ENST00000540101 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
C16orf62-211ENST00000540101 BIVM-ERCC5R4GMW8 1640 aa13.35□□□□□ -0.27
C16orf62-211ENST00000540101 POLA1P09884 1462 aaPredicted RBP13.32□□□□□ -0.28
C16orf62-211ENST00000540101 FGD5Q6ZNL6 1462 aa13.32□□□□□ -0.28
C16orf62-211ENST00000540101 EIF4G3O43432 1585 aaKnown RBP13.27□□□□□ -0.29
C16orf62-211ENST00000540101 RAD54L2Q9Y4B4 1467 aa13.25□□□□□ -0.29
C16orf62-211ENST00000540101 TARBP1Q13395 1621 aaKnown RBP13.24□□□□□ -0.29
C16orf62-211ENST00000540101 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.29
C16orf62-211ENST00000540101 SOGA1O94964 1423 aa13.23□□□□□ -0.29
C16orf62-211ENST00000540101 RIMBP3CA6NJZ7 1639 aa13.23□□□□□ -0.29
C16orf62-211ENST00000540101 RIMBP3BA6NNM3 1639 aa13.23□□□□□ -0.29
C16orf62-211ENST00000540101 RIMBP3Q9UFD9 1639 aa13.23□□□□□ -0.29
C16orf62-211ENST00000540101 ABCA10Q8WWZ4 1543 aa13.23□□□□□ -0.29
C16orf62-211ENST00000540101 ARHGEF11O15085 1522 aa13.2□□□□□ -0.3
C16orf62-211ENST00000540101 WDR97A6NE52 1622 aa13.17□□□□□ -0.3
C16orf62-211ENST00000540101 FBLN2P98095 1184 aa13.15□□□□□ -0.3
C16orf62-211ENST00000540101 CHD1O14646 1710 aa13.15□□□□□ -0.3
C16orf62-211ENST00000540101 TDRD9Q8NDG6 1382 aaKnown RBP13.15□□□□□ -0.3
C16orf62-211ENST00000540101 RUSC2Q8N2Y8 1516 aa13.14□□□□□ -0.31
C16orf62-211ENST00000540101 ABCA5Q8WWZ7 1642 aa13.13□□□□□ -0.31
C16orf62-211ENST00000540101 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
C16orf62-211ENST00000540101 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
C16orf62-211ENST00000540101 EEA1Q15075 1411 aa13.1□□□□□ -0.31
C16orf62-211ENST00000540101 GAPVD1Q14C86 1478 aa13.1□□□□□ -0.31
C16orf62-211ENST00000540101 SNAPC4Q5SXM2 1469 aa13.1□□□□□ -0.31
C16orf62-211ENST00000540101 IGF1RP08069 1367 aa13.08□□□□□ -0.31
C16orf62-211ENST00000540101 ARAP1Q96P48 1450 aa13.08□□□□□ -0.32
C16orf62-211ENST00000540101 GRIN2BQ13224 1484 aa13.06□□□□□ -0.32
C16orf62-211ENST00000540101 ERICH3Q5RHP9 1530 aa13.05□□□□□ -0.32
C16orf62-211ENST00000540101 MAGI1Q96QZ7 1491 aaPredicted RBP13.04□□□□□ -0.32
C16orf62-211ENST00000540101 CHMP7Q8WUX9 453 aaPredicted RBP13.03□□□□□ -0.32
C16orf62-211ENST00000540101 PRXQ9BXM0 1461 aa13.03□□□□□ -0.32
C16orf62-211ENST00000540101 CLASP1Q7Z460 1538 aa13.03□□□□□ -0.32
C16orf62-211ENST00000540101 CSRNP3Q8WYN3 585 aa13.02□□□□□ -0.33
C16orf62-211ENST00000540101 SYNJ2O15056 1496 aa13□□□□□ -0.33
C16orf62-211ENST00000540101 FAM9AQ8IZU1 332 aaPredicted RBP12.99□□□□□ -0.33
C16orf62-211ENST00000540101 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
C16orf62-211ENST00000540101 FHAD1B1AJZ9 1412 aa12.97□□□□□ -0.33
C16orf62-211ENST00000540101 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
C16orf62-211ENST00000540101 CARMIL1Q5VZK9 1371 aa12.96□□□□□ -0.33
C16orf62-211ENST00000540101 TRHP20396 242 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms