RNA–Protein interactions for RNA: ENST00000539927.1

C1RL-207, Transcript of complement C1r subcomponent like, humanhuman

TSL 2

Gene C1RL, Length 354 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-207ENST00000539927 NISCHQ9Y2I1 1504 aa49.08■■■■■ 5.45
C1RL-207ENST00000539927 ABCC9O60706 1549 aa44.37■■■■■ 4.69
C1RL-207ENST00000539927 CCDC180Q9P1Z9 1646 aa44.22■■■■■ 4.67
C1RL-207ENST00000539927 RB1CC1Q8TDY2 1594 aa42.14■■■■■ 4.34
C1RL-207ENST00000539927 NACADO15069 1562 aa41.76■■■■■ 4.28
C1RL-207ENST00000539927 DNAJC5BQ9UF47 199 aa41.72■■■■■ 4.27
C1RL-207ENST00000539927 DCAF8L2P0C7V8 631 aa41.62■■■■■ 4.25
C1RL-207ENST00000539927 UNC13AQ9UPW8 1703 aa41.43■■■■■ 4.22
C1RL-207ENST00000539927 PABPN1Q86U42 306 aaKnown RBP eCLIP41.26■■■■■ 4.2
C1RL-207ENST00000539927 MYO15BQ96JP2 1530 aa41.03■■■■■ 4.16
C1RL-207ENST00000539927 BICRAQ9NZM4 1560 aa40.91■■■■■ 4.14
C1RL-207ENST00000539927 ZCCHC6Q5VYS8 1495 aaKnown RBP40.62■■■■■ 4.09
C1RL-207ENST00000539927 DCAF1Q9Y4B6 1507 aa40.46■■■■■ 4.07
C1RL-207ENST00000539927 SCRIBQ14160 1630 aa40.33■■■■■ 4.05
C1RL-207ENST00000539927 SHROOM4Q9ULL8 1493 aa40.2■■■■■ 4.03
C1RL-207ENST00000539927 CC2D2AQ9P2K1 1620 aa40.1■■■■■ 4.01
C1RL-207ENST00000539927 CECR2Q9BXF3 1484 aa39.94■■■■□ 3.98
C1RL-207ENST00000539927 EIF4G1Q04637 1599 aaKnown RBP39.93■■■■□ 3.98
C1RL-207ENST00000539927 NCAPD3P42695 1498 aa38.48■■■■□ 3.75
C1RL-207ENST00000539927 DNAJC5Q9H3Z4 198 aa38.4■■■■□ 3.74
C1RL-207ENST00000539927 SMARCA4P51532 1647 aa38.4■■■■□ 3.74
C1RL-207ENST00000539927 ATAD2BQ9ULI0 1458 aa38.39■■■■□ 3.74
C1RL-207ENST00000539927 ERCC6Q03468 1493 aa38.33■■■■□ 3.73
C1RL-207ENST00000539927 SMARCA2P51531 1590 aa38.31■■■■□ 3.72
C1RL-207ENST00000539927 HMGXB3Q12766 1538 aa38.24■■■■□ 3.71
C1RL-207ENST00000539927 CUX2O14529 1486 aa38.23■■■■□ 3.71
C1RL-207ENST00000539927 BAZ1AQ9NRL2 1556 aaPredicted RBP38.12■■■■□ 3.69
C1RL-207ENST00000539927 NESP48681 1621 aa38.07■■■■□ 3.68
C1RL-207ENST00000539927 BAZ1BQ9UIG0 1483 aaKnown RBP38.06■■■■□ 3.68
C1RL-207ENST00000539927 PEG3Q9GZU2 1588 aa37.93■■■■□ 3.66
C1RL-207ENST00000539927 MROH2BQ7Z745 1585 aa37.85■■■■□ 3.65
C1RL-207ENST00000539927 LAMC3Q9Y6N6 1575 aa37.75■■■■□ 3.63
C1RL-207ENST00000539927 THOC2Q8NI27 1593 aaKnown RBP37.73■■■■□ 3.63
C1RL-207ENST00000539927 KIF21AQ7Z4S6 1674 aa37.72■■■■□ 3.63
C1RL-207ENST00000539927 WIZO95785 1651 aa37.5■■■■□ 3.59
C1RL-207ENST00000539927 PDS5BQ9NTI5 1447 aa37.48■■■■□ 3.59
C1RL-207ENST00000539927 CADPSQ9ULU8 1353 aa37.32■■■■□ 3.57
C1RL-207ENST00000539927 MRC2Q9UBG0 1479 aa37.2■■■■□ 3.54
C1RL-207ENST00000539927 WDR62O43379 1518 aa37.11■■■■□ 3.53
C1RL-207ENST00000539927 CEP164Q9UPV0 1460 aa37.03■■■■□ 3.52
C1RL-207ENST00000539927 FANCD2Q9BXW9 1451 aa36.96■■■■□ 3.51
C1RL-207ENST00000539927 RSF1Q96T23 1441 aaPredicted RBP36.93■■■■□ 3.5
C1RL-207ENST00000539927 TOP2AP11388 1531 aaKnown RBP36.9■■■■□ 3.5
C1RL-207ENST00000539927 CFTRP13569 1480 aa36.87■■■■□ 3.49
C1RL-207ENST00000539927 PRDM2Q13029 1718 aa36.79■■■■□ 3.48
C1RL-207ENST00000539927 TRIM41Q8WV44 630 aa36.78■■■■□ 3.48
C1RL-207ENST00000539927 URB2Q14146 1524 aaKnown RBP36.68■■■■□ 3.46
C1RL-207ENST00000539927 OSCARQ8IYS5 282 aa36.47■■■■□ 3.43
C1RL-207ENST00000539927 CCDC88BA6NC98 1476 aa36.47■■■■□ 3.43
C1RL-207ENST00000539927 ZNF608Q9ULD9 1512 aaPredicted RBP36.27■■■■□ 3.4
C1RL-207ENST00000539927 IFT140Q96RY7 1462 aa36.26■■■■□ 3.4
C1RL-207ENST00000539927 TOPBP1Q92547 1522 aa36.26■■■■□ 3.4
C1RL-207ENST00000539927 RIMBP3CA6NJZ7 1639 aa36.15■■■■□ 3.38
C1RL-207ENST00000539927 RIMBP3BA6NNM3 1639 aa36.15■■■■□ 3.38
C1RL-207ENST00000539927 RIMBP3Q9UFD9 1639 aa36.15■■■■□ 3.38
C1RL-207ENST00000539927 DNMBPQ6XZF7 1577 aa36.13■■■■□ 3.37
C1RL-207ENST00000539927 EIF4G3O43432 1585 aaKnown RBP36.12■■■■□ 3.37
C1RL-207ENST00000539927 ABCC8Q09428 1581 aa36.12■■■■□ 3.37
C1RL-207ENST00000539927 CHD1O14646 1710 aa36.02■■■■□ 3.36
C1RL-207ENST00000539927 TARBP1Q13395 1621 aaKnown RBP35.98■■■■□ 3.35
C1RL-207ENST00000539927 ARHGEF11O15085 1522 aa35.93■■■■□ 3.34
C1RL-207ENST00000539927 AQRO60306 1485 aaKnown RBP eCLIP35.91■■■■□ 3.34
C1RL-207ENST00000539927 POLA1P09884 1462 aaPredicted RBP35.86■■■■□ 3.33
C1RL-207ENST00000539927 FBLN2P98095 1184 aa35.77■■■■□ 3.32
C1RL-207ENST00000539927 RAD54L2Q9Y4B4 1467 aa35.77■■■■□ 3.32
C1RL-207ENST00000539927 SOGA1O94964 1423 aa35.68■■■■□ 3.3
C1RL-207ENST00000539927 CYB5RLQ6IPT4 315 aa35.68■■■■□ 3.3
C1RL-207ENST00000539927 TDRD9Q8NDG6 1382 aaKnown RBP35.65■■■■□ 3.3
C1RL-207ENST00000539927 FGD5Q6ZNL6 1462 aa35.63■■■■□ 3.29
C1RL-207ENST00000539927 CUX1P39880 1505 aa35.57■■■■□ 3.29
C1RL-207ENST00000539927 SNAPC4Q5SXM2 1469 aa35.55■■■■□ 3.28
C1RL-207ENST00000539927 ARAP1Q96P48 1450 aa35.55■■■■□ 3.28
C1RL-207ENST00000539927 WDR97A6NE52 1622 aa35.54■■■■□ 3.28
C1RL-207ENST00000539927 PBRM1Q86U86 1689 aa35.45■■■■□ 3.27
C1RL-207ENST00000539927 CHMP7Q8WUX9 453 aaPredicted RBP35.42■■■■□ 3.26
C1RL-207ENST00000539927 SYNJ1O43426 1573 aa35.41■■■■□ 3.26
C1RL-207ENST00000539927 MAGI1Q96QZ7 1491 aaPredicted RBP35.41■■■■□ 3.26
C1RL-207ENST00000539927 CLASP1Q7Z460 1538 aa35.4■■■■□ 3.26
C1RL-207ENST00000539927 TRHP20396 242 aaPredicted RBP35.39■■■■□ 3.26
C1RL-207ENST00000539927 GRIN2BQ13224 1484 aa35.39■■■■□ 3.26
C1RL-207ENST00000539927 SYNJ2O15056 1496 aa35.3■■■■□ 3.24
C1RL-207ENST00000539927 SUPT5HO00267 1087 aaKnown RBP35.29■■■■□ 3.24
C1RL-207ENST00000539927 GAPVD1Q14C86 1478 aa35.27■■■■□ 3.24
C1RL-207ENST00000539927 ABCA5Q8WWZ7 1642 aa35.21■■■■□ 3.23
C1RL-207ENST00000539927 ABCA10Q8WWZ4 1543 aa35.17■■■■□ 3.22
C1RL-207ENST00000539927 BIVM-ERCC5R4GMW8 1640 aa35.03■■■■□ 3.2
C1RL-207ENST00000539927 WRNQ14191 1432 aaPredicted RBP eCLIP34.98■■■■□ 3.19
C1RL-207ENST00000539927 TOP2BQ02880 1626 aa34.97■■■■□ 3.19
C1RL-207ENST00000539927 ADAMTS12P58397 1594 aa34.96■■■■□ 3.19
C1RL-207ENST00000539927 GRIN2AQ12879 1464 aa34.95■■■■□ 3.19
C1RL-207ENST00000539927 ERCC6L2Q5T890 1561 aa34.91■■■■□ 3.18
C1RL-207ENST00000539927 CEP170Q5SW79 1584 aa34.89■■■■□ 3.18
C1RL-207ENST00000539927 NUP160Q12769 1436 aa34.79■■■■□ 3.16
C1RL-207ENST00000539927 FHAD1B1AJZ9 1412 aa34.77■■■■□ 3.16
C1RL-207ENST00000539927 SHROOM2Q13796 1616 aa34.75■■■■□ 3.15
C1RL-207ENST00000539927 ERICH3Q5RHP9 1530 aa34.75■■■■□ 3.15
C1RL-207ENST00000539927 KIF13AQ9H1H9 1805 aa34.55■■■■□ 3.12
C1RL-207ENST00000539927 PRG4Q92954 1404 aaPredicted RBP34.52■■■■□ 3.12
C1RL-207ENST00000539927 AEBP2Q6ZN18 517 aaPredicted RBP34.5■■■■□ 3.11
C1RL-207ENST00000539927 RUSC2Q8N2Y8 1516 aa34.47■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms