RNA–Protein interactions for RNA: ENST00000539885.1

NCAPD2-209, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 3

Gene NCAPD2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-209ENST00000539885 NISCHQ9Y2I1 1504 aa27.51■■□□□ 1.99
NCAPD2-209ENST00000539885 CCDC180Q9P1Z9 1646 aa24.53■■□□□ 1.52
NCAPD2-209ENST00000539885 ABCC9O60706 1549 aa23.99■■□□□ 1.43
NCAPD2-209ENST00000539885 RB1CC1Q8TDY2 1594 aa23.12■■□□□ 1.29
NCAPD2-209ENST00000539885 NACADO15069 1562 aa23.09■■□□□ 1.29
NCAPD2-209ENST00000539885 DNAJC5BQ9UF47 199 aa23■■□□□ 1.27
NCAPD2-209ENST00000539885 MYO15BQ96JP2 1530 aa22.99■■□□□ 1.27
NCAPD2-209ENST00000539885 ZCCHC6Q5VYS8 1495 aaKnown RBP22.92■■□□□ 1.26
NCAPD2-209ENST00000539885 DCAF8L2P0C7V8 631 aa22.88■■□□□ 1.25
NCAPD2-209ENST00000539885 DCAF1Q9Y4B6 1507 aa22.83■■□□□ 1.25
NCAPD2-209ENST00000539885 UNC13AQ9UPW8 1703 aa22.46■■□□□ 1.19
NCAPD2-209ENST00000539885 BICRAQ9NZM4 1560 aa22.37■■□□□ 1.17
NCAPD2-209ENST00000539885 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
NCAPD2-209ENST00000539885 SHROOM4Q9ULL8 1493 aa22.3■■□□□ 1.16
NCAPD2-209ENST00000539885 SCRIBQ14160 1630 aa22.28■■□□□ 1.16
NCAPD2-209ENST00000539885 DNAJC5Q9H3Z4 198 aa21.99■■□□□ 1.11
NCAPD2-209ENST00000539885 EIF4G1Q04637 1599 aaKnown RBP21.81■■□□□ 1.08
NCAPD2-209ENST00000539885 CC2D2AQ9P2K1 1620 aa21.71■■□□□ 1.07
NCAPD2-209ENST00000539885 CECR2Q9BXF3 1484 aa21.6■■□□□ 1.05
NCAPD2-209ENST00000539885 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
NCAPD2-209ENST00000539885 SMARCA4P51532 1647 aa21.35■■□□□ 1.01
NCAPD2-209ENST00000539885 NCAPD3P42695 1498 aa21.31■■□□□ 1
NCAPD2-209ENST00000539885 SMARCA2P51531 1590 aa21.28■■□□□ 1
NCAPD2-209ENST00000539885 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
NCAPD2-209ENST00000539885 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
NCAPD2-209ENST00000539885 PEG3Q9GZU2 1588 aa21.2■□□□□ 0.98
NCAPD2-209ENST00000539885 MROH2BQ7Z745 1585 aa21.15■□□□□ 0.98
NCAPD2-209ENST00000539885 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
NCAPD2-209ENST00000539885 RSF1Q96T23 1441 aaPredicted RBP20.91■□□□□ 0.94
NCAPD2-209ENST00000539885 CUX2O14529 1486 aa20.88■□□□□ 0.93
NCAPD2-209ENST00000539885 WIZO95785 1651 aa20.88■□□□□ 0.93
NCAPD2-209ENST00000539885 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
NCAPD2-209ENST00000539885 LAMC3Q9Y6N6 1575 aa20.75■□□□□ 0.91
NCAPD2-209ENST00000539885 ERCC6Q03468 1493 aa20.73■□□□□ 0.91
NCAPD2-209ENST00000539885 NESP48681 1621 aa20.71■□□□□ 0.91
NCAPD2-209ENST00000539885 CADPSQ9ULU8 1353 aa20.65■□□□□ 0.9
NCAPD2-209ENST00000539885 PDS5BQ9NTI5 1447 aa20.61■□□□□ 0.89
NCAPD2-209ENST00000539885 TRIM41Q8WV44 630 aa20.53■□□□□ 0.88
NCAPD2-209ENST00000539885 CFTRP13569 1480 aa20.53■□□□□ 0.88
NCAPD2-209ENST00000539885 THOC2Q8NI27 1593 aaKnown RBP20.48■□□□□ 0.87
NCAPD2-209ENST00000539885 KIF21AQ7Z4S6 1674 aa20.46■□□□□ 0.87
NCAPD2-209ENST00000539885 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
NCAPD2-209ENST00000539885 FANCD2Q9BXW9 1451 aa20.41■□□□□ 0.86
NCAPD2-209ENST00000539885 CEP164Q9UPV0 1460 aa20.41■□□□□ 0.86
NCAPD2-209ENST00000539885 MRC2Q9UBG0 1479 aa20.4■□□□□ 0.86
NCAPD2-209ENST00000539885 WDR62O43379 1518 aa20.34■□□□□ 0.85
NCAPD2-209ENST00000539885 PRDM2Q13029 1718 aa20.31■□□□□ 0.84
NCAPD2-209ENST00000539885 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
NCAPD2-209ENST00000539885 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
NCAPD2-209ENST00000539885 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
NCAPD2-209ENST00000539885 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
NCAPD2-209ENST00000539885 DNMBPQ6XZF7 1577 aa20.06■□□□□ 0.8
NCAPD2-209ENST00000539885 IFT140Q96RY7 1462 aa20■□□□□ 0.79
NCAPD2-209ENST00000539885 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
NCAPD2-209ENST00000539885 CUX1P39880 1505 aa19.86■□□□□ 0.77
NCAPD2-209ENST00000539885 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
NCAPD2-209ENST00000539885 ZNF608Q9ULD9 1512 aaPredicted RBP19.83■□□□□ 0.77
NCAPD2-209ENST00000539885 FGD5Q6ZNL6 1462 aa19.82■□□□□ 0.76
NCAPD2-209ENST00000539885 SOGA1O94964 1423 aa19.8■□□□□ 0.76
NCAPD2-209ENST00000539885 EIF4G3O43432 1585 aaKnown RBP19.79■□□□□ 0.76
NCAPD2-209ENST00000539885 WDR97A6NE52 1622 aa19.78■□□□□ 0.76
NCAPD2-209ENST00000539885 RAD54L2Q9Y4B4 1467 aa19.75■□□□□ 0.75
NCAPD2-209ENST00000539885 WRNQ14191 1432 aaPredicted RBP eCLIP19.74■□□□□ 0.75
NCAPD2-209ENST00000539885 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.755e-10■■□□□ 12.4
NCAPD2-209ENST00000539885 TOP2BQ02880 1626 aa19.7■□□□□ 0.74
NCAPD2-209ENST00000539885 BIVM-ERCC5R4GMW8 1640 aa19.69■□□□□ 0.74
NCAPD2-209ENST00000539885 OSCARQ8IYS5 282 aa19.67■□□□□ 0.74
NCAPD2-209ENST00000539885 TDRD9Q8NDG6 1382 aaKnown RBP19.67■□□□□ 0.74
NCAPD2-209ENST00000539885 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
NCAPD2-209ENST00000539885 SYNJ1O43426 1573 aa19.65■□□□□ 0.74
NCAPD2-209ENST00000539885 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.73
NCAPD2-209ENST00000539885 GRIN2BQ13224 1484 aa19.61■□□□□ 0.73
NCAPD2-209ENST00000539885 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
NCAPD2-209ENST00000539885 GAPVD1Q14C86 1478 aa19.58■□□□□ 0.72
NCAPD2-209ENST00000539885 ABCA5Q8WWZ7 1642 aa19.58■□□□□ 0.72
NCAPD2-209ENST00000539885 SNAPC4Q5SXM2 1469 aa19.56■□□□□ 0.72
NCAPD2-209ENST00000539885 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
NCAPD2-209ENST00000539885 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
NCAPD2-209ENST00000539885 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
NCAPD2-209ENST00000539885 SYNJ2O15056 1496 aa19.5■□□□□ 0.71
NCAPD2-209ENST00000539885 CHD1O14646 1710 aa19.5■□□□□ 0.71
NCAPD2-209ENST00000539885 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
NCAPD2-209ENST00000539885 FBLN2P98095 1184 aa19.46■□□□□ 0.71
NCAPD2-209ENST00000539885 CHMP7Q8WUX9 453 aaPredicted RBP19.44■□□□□ 0.7
NCAPD2-209ENST00000539885 ERICH3Q5RHP9 1530 aa19.44■□□□□ 0.7
NCAPD2-209ENST00000539885 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
NCAPD2-209ENST00000539885 ARHGEF11O15085 1522 aa19.4■□□□□ 0.7
NCAPD2-209ENST00000539885 FHAD1B1AJZ9 1412 aa19.38■□□□□ 0.69
NCAPD2-209ENST00000539885 TRHP20396 242 aaPredicted RBP19.38■□□□□ 0.69
NCAPD2-209ENST00000539885 CLASP1Q7Z460 1538 aa19.37■□□□□ 0.69
NCAPD2-209ENST00000539885 GRIN2AQ12879 1464 aa19.35■□□□□ 0.69
NCAPD2-209ENST00000539885 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
NCAPD2-209ENST00000539885 NUP160Q12769 1436 aa19.29■□□□□ 0.68
NCAPD2-209ENST00000539885 IGF1RP08069 1367 aa19.24■□□□□ 0.67
NCAPD2-209ENST00000539885 CUL7Q14999 1698 aa19.24■□□□□ 0.67
NCAPD2-209ENST00000539885 CYB5RLQ6IPT4 315 aa19.23■□□□□ 0.67
NCAPD2-209ENST00000539885 CEP170Q5SW79 1584 aa19.23■□□□□ 0.67
NCAPD2-209ENST00000539885 ARAP1Q96P48 1450 aa19.18■□□□□ 0.66
NCAPD2-209ENST00000539885 CARMIL1Q5VZK9 1371 aa19.13■□□□□ 0.65
NCAPD2-209ENST00000539885 SHROOM2Q13796 1616 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms