RNA–Protein interactions for RNA: ENST00000539724.1

CORO1B-205, Transcript of coronin 1B, humanhuman

TSL 3

Gene CORO1B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CORO1B-205ENST00000539724 NISCHQ9Y2I1 1504 aa40.95■■■■■ 4.15
CORO1B-205ENST00000539724 CCDC180Q9P1Z9 1646 aa36.47■■■■□ 3.43
CORO1B-205ENST00000539724 ABCC9O60706 1549 aa35.62■■■■□ 3.29
CORO1B-205ENST00000539724 RB1CC1Q8TDY2 1594 aa34.32■■■■□ 3.08
CORO1B-205ENST00000539724 NACADO15069 1562 aa34.27■■■■□ 3.08
CORO1B-205ENST00000539724 DCAF8L2P0C7V8 631 aa34.17■■■■□ 3.06
CORO1B-205ENST00000539724 ZCCHC6Q5VYS8 1495 aaKnown RBP34.12■■■■□ 3.05
CORO1B-205ENST00000539724 MYO15BQ96JP2 1530 aa34.08■■■■□ 3.05
CORO1B-205ENST00000539724 DCAF1Q9Y4B6 1507 aa33.92■■■■□ 3.02
CORO1B-205ENST00000539724 UNC13AQ9UPW8 1703 aa33.5■■■□□ 2.95
CORO1B-205ENST00000539724 PABPN1Q86U42 306 aaKnown RBP eCLIP33.24■■■□□ 2.91
CORO1B-205ENST00000539724 BICRAQ9NZM4 1560 aa33.23■■■□□ 2.91
CORO1B-205ENST00000539724 SCRIBQ14160 1630 aa33.22■■■□□ 2.91
CORO1B-205ENST00000539724 DNAJC5BQ9UF47 199 aa33.21■■■□□ 2.91
CORO1B-205ENST00000539724 SHROOM4Q9ULL8 1493 aa32.97■■■□□ 2.87
CORO1B-205ENST00000539724 EIF4G1Q04637 1599 aaKnown RBP32.38■■■□□ 2.77
CORO1B-205ENST00000539724 CC2D2AQ9P2K1 1620 aa32.24■■■□□ 2.75
CORO1B-205ENST00000539724 CECR2Q9BXF3 1484 aa32.03■■■□□ 2.72
CORO1B-205ENST00000539724 SMARCA4P51532 1647 aa31.79■■■□□ 2.68
CORO1B-205ENST00000539724 BAZ1AQ9NRL2 1556 aaPredicted RBP31.77■■■□□ 2.68
CORO1B-205ENST00000539724 SMARCA2P51531 1590 aa31.6■■■□□ 2.65
CORO1B-205ENST00000539724 NCAPD3P42695 1498 aa31.6■■■□□ 2.65
CORO1B-205ENST00000539724 ATAD2BQ9ULI0 1458 aa31.59■■■□□ 2.65
CORO1B-205ENST00000539724 MROH2BQ7Z745 1585 aa31.54■■■□□ 2.64
CORO1B-205ENST00000539724 PEG3Q9GZU2 1588 aa31.49■■■□□ 2.63
CORO1B-205ENST00000539724 HMGXB3Q12766 1538 aa31.47■■■□□ 2.63
CORO1B-205ENST00000539724 BAZ1BQ9UIG0 1483 aaKnown RBP31.36■■■□□ 2.61
CORO1B-205ENST00000539724 WIZO95785 1651 aa31.21■■■□□ 2.59
CORO1B-205ENST00000539724 RSF1Q96T23 1441 aaPredicted RBP31.17■■■□□ 2.58
CORO1B-205ENST00000539724 TOP2AP11388 1531 aaKnown RBP30.91■■■□□ 2.54
CORO1B-205ENST00000539724 NESP48681 1621 aa30.8■■■□□ 2.52
CORO1B-205ENST00000539724 LAMC3Q9Y6N6 1575 aa30.8■■■□□ 2.52
CORO1B-205ENST00000539724 ERCC6Q03468 1493 aa30.74■■■□□ 2.51
CORO1B-205ENST00000539724 CADPSQ9ULU8 1353 aa30.66■■■□□ 2.5
CORO1B-205ENST00000539724 PDS5BQ9NTI5 1447 aa30.58■■■□□ 2.49
CORO1B-205ENST00000539724 CCDC88BA6NC98 1476 aa30.5■■■□□ 2.47
CORO1B-205ENST00000539724 CFTRP13569 1480 aa30.49■■■□□ 2.47
CORO1B-205ENST00000539724 KIF21AQ7Z4S6 1674 aa30.48■■■□□ 2.47
CORO1B-205ENST00000539724 DNAJC5Q9H3Z4 198 aa30.47■■■□□ 2.47
CORO1B-205ENST00000539724 CUX2O14529 1486 aa30.44■■■□□ 2.46
CORO1B-205ENST00000539724 THOC2Q8NI27 1593 aaKnown RBP30.39■■■□□ 2.46
CORO1B-205ENST00000539724 SUPT5HO00267 1087 aaKnown RBP30.34■■■□□ 2.45
CORO1B-205ENST00000539724 FANCD2Q9BXW9 1451 aa30.32■■■□□ 2.44
CORO1B-205ENST00000539724 CEP164Q9UPV0 1460 aa30.31■■■□□ 2.44
CORO1B-205ENST00000539724 PRDM2Q13029 1718 aa30.3■■■□□ 2.44
CORO1B-205ENST00000539724 MRC2Q9UBG0 1479 aa30.26■■■□□ 2.44
CORO1B-205ENST00000539724 WDR62O43379 1518 aa30.17■■■□□ 2.42
CORO1B-205ENST00000539724 URB2Q14146 1524 aaKnown RBP30■■■□□ 2.39
CORO1B-205ENST00000539724 ABCC8Q09428 1581 aa29.88■■■□□ 2.37
CORO1B-205ENST00000539724 TOPBP1Q92547 1522 aa29.83■■■□□ 2.37
CORO1B-205ENST00000539724 DNMBPQ6XZF7 1577 aa29.82■■■□□ 2.36
CORO1B-205ENST00000539724 IFT140Q96RY7 1462 aa29.68■■■□□ 2.34
CORO1B-205ENST00000539724 CUX1P39880 1505 aa29.59■■■□□ 2.33
CORO1B-205ENST00000539724 POLA1P09884 1462 aaPredicted RBP29.58■■■□□ 2.33
CORO1B-205ENST00000539724 FGD5Q6ZNL6 1462 aa29.51■■■□□ 2.31
CORO1B-205ENST00000539724 TARBP1Q13395 1621 aaKnown RBP29.51■■■□□ 2.31
CORO1B-205ENST00000539724 ZNF608Q9ULD9 1512 aaPredicted RBP29.49■■■□□ 2.31
CORO1B-205ENST00000539724 SOGA1O94964 1423 aa29.45■■■□□ 2.31
CORO1B-205ENST00000539724 EIF4G3O43432 1585 aaKnown RBP29.43■■■□□ 2.3
CORO1B-205ENST00000539724 RAD54L2Q9Y4B4 1467 aa29.42■■■□□ 2.3
CORO1B-205ENST00000539724 WRNQ14191 1432 aaPredicted RBP eCLIP29.42■■■□□ 2.3
CORO1B-205ENST00000539724 BIVM-ERCC5R4GMW8 1640 aa29.38■■■□□ 2.29
CORO1B-205ENST00000539724 TOP2BQ02880 1626 aa29.37■■■□□ 2.29
CORO1B-205ENST00000539724 WDR97A6NE52 1622 aa29.35■■■□□ 2.29
CORO1B-205ENST00000539724 SYNJ1O43426 1573 aa29.33■■■□□ 2.29
CORO1B-205ENST00000539724 AQRO60306 1485 aaKnown RBP eCLIP29.32■■■□□ 2.289e-7■■■■□ 25.3
CORO1B-205ENST00000539724 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.28
CORO1B-205ENST00000539724 ABCA10Q8WWZ4 1543 aa29.23■■■□□ 2.27
CORO1B-205ENST00000539724 TRIM41Q8WV44 630 aa29.16■■■□□ 2.26
CORO1B-205ENST00000539724 OSCARQ8IYS5 282 aa29.14■■■□□ 2.26
CORO1B-205ENST00000539724 GRIN2BQ13224 1484 aa29.13■■■□□ 2.25
CORO1B-205ENST00000539724 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
CORO1B-205ENST00000539724 GAPVD1Q14C86 1478 aa29.12■■■□□ 2.25
CORO1B-205ENST00000539724 SNAPC4Q5SXM2 1469 aa29.09■■■□□ 2.25
CORO1B-205ENST00000539724 PBRM1Q86U86 1689 aa29.09■■■□□ 2.25
CORO1B-205ENST00000539724 MAGI1Q96QZ7 1491 aaPredicted RBP29.07■■■□□ 2.24
CORO1B-205ENST00000539724 CHD1O14646 1710 aa29.04■■■□□ 2.24
CORO1B-205ENST00000539724 FBLN2P98095 1184 aa28.98■■■□□ 2.23
CORO1B-205ENST00000539724 SYNJ2O15056 1496 aa28.95■■■□□ 2.22
CORO1B-205ENST00000539724 CHMP7Q8WUX9 453 aaPredicted RBP28.92■■■□□ 2.22
CORO1B-205ENST00000539724 ERICH3Q5RHP9 1530 aa28.9■■■□□ 2.22
CORO1B-205ENST00000539724 ADAMTS12P58397 1594 aa28.85■■■□□ 2.21
CORO1B-205ENST00000539724 KIF27Q86VH2 1401 aa28.82■■■□□ 2.2
CORO1B-205ENST00000539724 FHAD1B1AJZ9 1412 aa28.8■■■□□ 2.2
CORO1B-205ENST00000539724 GRIN2AQ12879 1464 aa28.76■■■□□ 2.19
CORO1B-205ENST00000539724 CLASP1Q7Z460 1538 aa28.73■■■□□ 2.19
CORO1B-205ENST00000539724 RIMBP3CA6NJZ7 1639 aa28.68■■■□□ 2.18
CORO1B-205ENST00000539724 RIMBP3BA6NNM3 1639 aa28.68■■■□□ 2.18
CORO1B-205ENST00000539724 RIMBP3Q9UFD9 1639 aa28.68■■■□□ 2.18
CORO1B-205ENST00000539724 ARHGEF11O15085 1522 aa28.68■■■□□ 2.18
CORO1B-205ENST00000539724 CUL7Q14999 1698 aa28.66■■■□□ 2.18
CORO1B-205ENST00000539724 IGF1RP08069 1367 aa28.65■■■□□ 2.18
CORO1B-205ENST00000539724 NUP160Q12769 1436 aa28.62■■■□□ 2.17
CORO1B-205ENST00000539724 CEP170Q5SW79 1584 aa28.6■■■□□ 2.17
CORO1B-205ENST00000539724 CARMIL1Q5VZK9 1371 aa28.5■■■□□ 2.15
CORO1B-205ENST00000539724 RUSC2Q8N2Y8 1516 aa28.48■■■□□ 2.15
CORO1B-205ENST00000539724 ARAP1Q96P48 1450 aa28.43■■■□□ 2.14
CORO1B-205ENST00000539724 SHROOM2Q13796 1616 aa28.42■■■□□ 2.14
CORO1B-205ENST00000539724 CYB5RLQ6IPT4 315 aa28.41■■■□□ 2.14
CORO1B-205ENST00000539724 RAPGEF2Q9Y4G8 1499 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms