RNA–Protein interactions for RNA: ENST00000539693.1

NR2C2AP-206, Transcript of nuclear receptor 2C2 associated protein, humanhuman

TSL 5

Gene NR2C2AP, Length 970 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR2C2AP-206ENST00000539693 NISCHQ9Y2I1 1504 aa33.85■■■■□ 3.01
NR2C2AP-206ENST00000539693 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
NR2C2AP-206ENST00000539693 ABCC9O60706 1549 aa30.13■■■□□ 2.41
NR2C2AP-206ENST00000539693 RB1CC1Q8TDY2 1594 aa28.82■■■□□ 2.2
NR2C2AP-206ENST00000539693 NACADO15069 1562 aa28.68■■■□□ 2.18
NR2C2AP-206ENST00000539693 DCAF8L2P0C7V8 631 aa28.61■■■□□ 2.17
NR2C2AP-206ENST00000539693 MYO15BQ96JP2 1530 aa28.37■■■□□ 2.13
NR2C2AP-206ENST00000539693 DNAJC5BQ9UF47 199 aa28.17■■■□□ 2.1
NR2C2AP-206ENST00000539693 PABPN1Q86U42 306 aaKnown RBP eCLIP28.13■■■□□ 2.09
NR2C2AP-206ENST00000539693 ZCCHC6Q5VYS8 1495 aaKnown RBP28.03■■■□□ 2.08
NR2C2AP-206ENST00000539693 DCAF1Q9Y4B6 1507 aa28.02■■■□□ 2.08
NR2C2AP-206ENST00000539693 UNC13AQ9UPW8 1703 aa28■■■□□ 2.07
NR2C2AP-206ENST00000539693 BICRAQ9NZM4 1560 aa27.86■■■□□ 2.05
NR2C2AP-206ENST00000539693 SHROOM4Q9ULL8 1493 aa27.67■■■□□ 2.02
NR2C2AP-206ENST00000539693 SCRIBQ14160 1630 aa27.52■■■□□ 2
NR2C2AP-206ENST00000539693 CC2D2AQ9P2K1 1620 aa27.22■■□□□ 1.95
NR2C2AP-206ENST00000539693 EIF4G1Q04637 1599 aaKnown RBP27.21■■□□□ 1.95
NR2C2AP-206ENST00000539693 CECR2Q9BXF3 1484 aa27.19■■□□□ 1.94
NR2C2AP-206ENST00000539693 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
NR2C2AP-206ENST00000539693 ATAD2BQ9ULI0 1458 aa26.37■■□□□ 1.81
NR2C2AP-206ENST00000539693 SMARCA2P51531 1590 aa26.34■■□□□ 1.81
NR2C2AP-206ENST00000539693 SMARCA4P51532 1647 aa26.32■■□□□ 1.8
NR2C2AP-206ENST00000539693 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
NR2C2AP-206ENST00000539693 HMGXB3Q12766 1538 aa26.24■■□□□ 1.79
NR2C2AP-206ENST00000539693 BAZ1BQ9UIG0 1483 aaKnown RBP26.12■■□□□ 1.77
NR2C2AP-206ENST00000539693 PEG3Q9GZU2 1588 aa26.12■■□□□ 1.77
NR2C2AP-206ENST00000539693 ERCC6Q03468 1493 aa26.08■■□□□ 1.77
NR2C2AP-206ENST00000539693 CUX2O14529 1486 aa26.02■■□□□ 1.76
NR2C2AP-206ENST00000539693 MROH2BQ7Z745 1585 aa26.02■■□□□ 1.76
NR2C2AP-206ENST00000539693 DNAJC5Q9H3Z4 198 aa25.91■■□□□ 1.74
NR2C2AP-206ENST00000539693 NESP48681 1621 aa25.88■■□□□ 1.73
NR2C2AP-206ENST00000539693 LAMC3Q9Y6N6 1575 aa25.83■■□□□ 1.73
NR2C2AP-206ENST00000539693 PDS5BQ9NTI5 1447 aa25.76■■□□□ 1.71
NR2C2AP-206ENST00000539693 CADPSQ9ULU8 1353 aa25.7■■□□□ 1.71
NR2C2AP-206ENST00000539693 WIZO95785 1651 aa25.68■■□□□ 1.7
NR2C2AP-206ENST00000539693 RSF1Q96T23 1441 aaPredicted RBP25.59■■□□□ 1.69
NR2C2AP-206ENST00000539693 THOC2Q8NI27 1593 aaKnown RBP25.57■■□□□ 1.68
NR2C2AP-206ENST00000539693 KIF21AQ7Z4S6 1674 aa25.52■■□□□ 1.68
NR2C2AP-206ENST00000539693 MRC2Q9UBG0 1479 aa25.43■■□□□ 1.66
NR2C2AP-206ENST00000539693 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
NR2C2AP-206ENST00000539693 CFTRP13569 1480 aa25.4■■□□□ 1.66
NR2C2AP-206ENST00000539693 CEP164Q9UPV0 1460 aa25.36■■□□□ 1.65
NR2C2AP-206ENST00000539693 FANCD2Q9BXW9 1451 aa25.34■■□□□ 1.65
NR2C2AP-206ENST00000539693 WDR62O43379 1518 aa25.32■■□□□ 1.64
NR2C2AP-206ENST00000539693 CCDC88BA6NC98 1476 aa25.17■■□□□ 1.62
NR2C2AP-206ENST00000539693 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
NR2C2AP-206ENST00000539693 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
NR2C2AP-206ENST00000539693 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
NR2C2AP-206ENST00000539693 OSCARQ8IYS5 282 aa24.96■■□□□ 1.59
NR2C2AP-206ENST00000539693 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
NR2C2AP-206ENST00000539693 TOPBP1Q92547 1522 aa24.86■■□□□ 1.57
NR2C2AP-206ENST00000539693 DNMBPQ6XZF7 1577 aa24.78■■□□□ 1.56
NR2C2AP-206ENST00000539693 TRIM41Q8WV44 630 aa24.75■■□□□ 1.55
NR2C2AP-206ENST00000539693 ZNF608Q9ULD9 1512 aaPredicted RBP24.72■■□□□ 1.55
NR2C2AP-206ENST00000539693 POLA1P09884 1462 aaPredicted RBP24.6■■□□□ 1.53
NR2C2AP-206ENST00000539693 SUPT5HO00267 1087 aaKnown RBP24.6■■□□□ 1.53
NR2C2AP-206ENST00000539693 TARBP1Q13395 1621 aaKnown RBP24.59■■□□□ 1.53
NR2C2AP-206ENST00000539693 SOGA1O94964 1423 aa24.59■■□□□ 1.53
NR2C2AP-206ENST00000539693 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.53
NR2C2AP-206ENST00000539693 EIF4G3O43432 1585 aaKnown RBP24.57■■□□□ 1.52
NR2C2AP-206ENST00000539693 RAD54L2Q9Y4B4 1467 aa24.5■■□□□ 1.51
NR2C2AP-206ENST00000539693 FBLN2P98095 1184 aa24.48■■□□□ 1.51
NR2C2AP-206ENST00000539693 TDRD9Q8NDG6 1382 aaKnown RBP24.47■■□□□ 1.51
NR2C2AP-206ENST00000539693 FGD5Q6ZNL6 1462 aa24.46■■□□□ 1.51
NR2C2AP-206ENST00000539693 WDR97A6NE52 1622 aa24.46■■□□□ 1.51
NR2C2AP-206ENST00000539693 CUX1P39880 1505 aa24.44■■□□□ 1.5
NR2C2AP-206ENST00000539693 RIMBP3CA6NJZ7 1639 aa24.4■■□□□ 1.5
NR2C2AP-206ENST00000539693 RIMBP3BA6NNM3 1639 aa24.4■■□□□ 1.5
NR2C2AP-206ENST00000539693 RIMBP3Q9UFD9 1639 aa24.4■■□□□ 1.5
NR2C2AP-206ENST00000539693 ARHGEF11O15085 1522 aa24.37■■□□□ 1.49
NR2C2AP-206ENST00000539693 CHMP7Q8WUX9 453 aaPredicted RBP24.37■■□□□ 1.49
NR2C2AP-206ENST00000539693 CHD1O14646 1710 aa24.35■■□□□ 1.49
NR2C2AP-206ENST00000539693 GRIN2BQ13224 1484 aa24.34■■□□□ 1.49
NR2C2AP-206ENST00000539693 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
NR2C2AP-206ENST00000539693 CYB5RLQ6IPT4 315 aa24.3■■□□□ 1.48
NR2C2AP-206ENST00000539693 SNAPC4Q5SXM2 1469 aa24.3■■□□□ 1.48
NR2C2AP-206ENST00000539693 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
NR2C2AP-206ENST00000539693 ABCA10Q8WWZ4 1543 aa24.25■■□□□ 1.47
NR2C2AP-206ENST00000539693 WRNQ14191 1432 aaPredicted RBP eCLIP24.24■■□□□ 1.47
NR2C2AP-206ENST00000539693 SYNJ2O15056 1496 aa24.22■■□□□ 1.47
NR2C2AP-206ENST00000539693 SYNJ1O43426 1573 aa24.2■■□□□ 1.46
NR2C2AP-206ENST00000539693 CLASP1Q7Z460 1538 aa24.12■■□□□ 1.45
NR2C2AP-206ENST00000539693 TOP2BQ02880 1626 aa24.12■■□□□ 1.45
NR2C2AP-206ENST00000539693 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
NR2C2AP-206ENST00000539693 PBRM1Q86U86 1689 aa24.11■■□□□ 1.45
NR2C2AP-206ENST00000539693 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
NR2C2AP-206ENST00000539693 BIVM-ERCC5R4GMW8 1640 aa24.09■■□□□ 1.45
NR2C2AP-206ENST00000539693 TRHP20396 242 aaPredicted RBP24■■□□□ 1.43
NR2C2AP-206ENST00000539693 FHAD1B1AJZ9 1412 aa23.98■■□□□ 1.43
NR2C2AP-206ENST00000539693 GRIN2AQ12879 1464 aa23.97■■□□□ 1.43
NR2C2AP-206ENST00000539693 ERICH3Q5RHP9 1530 aa23.95■■□□□ 1.43
NR2C2AP-206ENST00000539693 NUP160Q12769 1436 aa23.91■■□□□ 1.42
NR2C2AP-206ENST00000539693 ADAMTS12P58397 1594 aa23.91■■□□□ 1.42
NR2C2AP-206ENST00000539693 CEP170Q5SW79 1584 aa23.81■■□□□ 1.4
NR2C2AP-206ENST00000539693 JPH4Q96JJ6 628 aa23.78■■□□□ 1.4
NR2C2AP-206ENST00000539693 KIF27Q86VH2 1401 aa23.75■■□□□ 1.39
NR2C2AP-206ENST00000539693 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
NR2C2AP-206ENST00000539693 IGF1RP08069 1367 aa23.72■■□□□ 1.39
NR2C2AP-206ENST00000539693 ERCC6L2Q5T890 1561 aa23.69■■□□□ 1.38
NR2C2AP-206ENST00000539693 PRG4Q92954 1404 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms