RNA–Protein interactions for RNA: ENST00000539677.1

CPPED1-204, Transcript of calcineurin like phosphoesterase domain containing 1, humanhuman

TSL 2

Gene CPPED1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1-204ENST00000539677 NISCHQ9Y2I1 1504 aa33.23■■■□□ 2.91
CPPED1-204ENST00000539677 CCDC180Q9P1Z9 1646 aa29.72■■■□□ 2.35
CPPED1-204ENST00000539677 ABCC9O60706 1549 aa29.38■■■□□ 2.29
CPPED1-204ENST00000539677 RB1CC1Q8TDY2 1594 aa28.16■■■□□ 2.1
CPPED1-204ENST00000539677 NACADO15069 1562 aa28.05■■■□□ 2.08
CPPED1-204ENST00000539677 DCAF8L2P0C7V8 631 aa27.89■■■□□ 2.06
CPPED1-204ENST00000539677 MYO15BQ96JP2 1530 aa27.79■■■□□ 2.04
CPPED1-204ENST00000539677 ZCCHC6Q5VYS8 1495 aaKnown RBP27.59■■■□□ 2.01
CPPED1-204ENST00000539677 DCAF1Q9Y4B6 1507 aa27.51■■■□□ 2
CPPED1-204ENST00000539677 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
CPPED1-204ENST00000539677 PABPN1Q86U42 306 aaKnown RBP eCLIP27.39■■□□□ 1.98
CPPED1-204ENST00000539677 DNAJC5BQ9UF47 199 aa27.31■■□□□ 1.96
CPPED1-204ENST00000539677 BICRAQ9NZM4 1560 aa27.28■■□□□ 1.96
CPPED1-204ENST00000539677 SHROOM4Q9ULL8 1493 aa27.05■■□□□ 1.92
CPPED1-204ENST00000539677 SCRIBQ14160 1630 aa27.02■■□□□ 1.92
CPPED1-204ENST00000539677 EIF4G1Q04637 1599 aaKnown RBP26.6■■□□□ 1.85
CPPED1-204ENST00000539677 CC2D2AQ9P2K1 1620 aa26.57■■□□□ 1.84
CPPED1-204ENST00000539677 CECR2Q9BXF3 1484 aa26.48■■□□□ 1.83
CPPED1-204ENST00000539677 NCAPD3P42695 1498 aa25.89■■□□□ 1.73
CPPED1-204ENST00000539677 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
CPPED1-204ENST00000539677 ATAD2BQ9ULI0 1458 aa25.82■■□□□ 1.72
CPPED1-204ENST00000539677 SMARCA2P51531 1590 aa25.79■■□□□ 1.72
CPPED1-204ENST00000539677 BAZ1AQ9NRL2 1556 aaPredicted RBP25.79■■□□□ 1.72
CPPED1-204ENST00000539677 HMGXB3Q12766 1538 aa25.71■■□□□ 1.71
CPPED1-204ENST00000539677 PEG3Q9GZU2 1588 aa25.63■■□□□ 1.69
CPPED1-204ENST00000539677 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
CPPED1-204ENST00000539677 MROH2BQ7Z745 1585 aa25.57■■□□□ 1.68
CPPED1-204ENST00000539677 ERCC6Q03468 1493 aa25.39■■□□□ 1.65
CPPED1-204ENST00000539677 NESP48681 1621 aa25.3■■□□□ 1.64
CPPED1-204ENST00000539677 CUX2O14529 1486 aa25.28■■□□□ 1.64
CPPED1-204ENST00000539677 WIZO95785 1651 aa25.26■■□□□ 1.63
CPPED1-204ENST00000539677 LAMC3Q9Y6N6 1575 aa25.25■■□□□ 1.63
CPPED1-204ENST00000539677 RSF1Q96T23 1441 aaPredicted RBP25.17■■□□□ 1.62
CPPED1-204ENST00000539677 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
CPPED1-204ENST00000539677 CADPSQ9ULU8 1353 aa25.11■■□□□ 1.61
CPPED1-204ENST00000539677 THOC2Q8NI27 1593 aaKnown RBP25.02■■□□□ 1.6
CPPED1-204ENST00000539677 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
CPPED1-204ENST00000539677 KIF21AQ7Z4S6 1674 aa25■■□□□ 1.59
CPPED1-204ENST00000539677 DNAJC5Q9H3Z4 198 aa24.95■■□□□ 1.58
CPPED1-204ENST00000539677 CFTRP13569 1480 aa24.88■■□□□ 1.57
CPPED1-204ENST00000539677 MRC2Q9UBG0 1479 aa24.84■■□□□ 1.57
CPPED1-204ENST00000539677 CEP164Q9UPV0 1460 aa24.81■■□□□ 1.56
CPPED1-204ENST00000539677 FANCD2Q9BXW9 1451 aa24.79■■□□□ 1.56
CPPED1-204ENST00000539677 WDR62O43379 1518 aa24.77■■□□□ 1.56
CPPED1-204ENST00000539677 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.55
CPPED1-204ENST00000539677 PRDM2Q13029 1718 aa24.64■■□□□ 1.54
CPPED1-204ENST00000539677 URB2Q14146 1524 aaKnown RBP24.56■■□□□ 1.52
CPPED1-204ENST00000539677 ABCC8Q09428 1581 aa24.39■■□□□ 1.5
CPPED1-204ENST00000539677 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
CPPED1-204ENST00000539677 IFT140Q96RY7 1462 aa24.32■■□□□ 1.48
CPPED1-204ENST00000539677 DNMBPQ6XZF7 1577 aa24.3■■□□□ 1.48
CPPED1-204ENST00000539677 SUPT5HO00267 1087 aaKnown RBP24.23■■□□□ 1.47
CPPED1-204ENST00000539677 ZNF608Q9ULD9 1512 aaPredicted RBP24.19■■□□□ 1.46
CPPED1-204ENST00000539677 OSCARQ8IYS5 282 aa24.18■■□□□ 1.46
CPPED1-204ENST00000539677 POLA1P09884 1462 aaPredicted RBP24.12■■□□□ 1.45
CPPED1-204ENST00000539677 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
CPPED1-204ENST00000539677 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.44
CPPED1-204ENST00000539677 SOGA1O94964 1423 aa24.03■■□□□ 1.44
CPPED1-204ENST00000539677 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.43
CPPED1-204ENST00000539677 CUX1P39880 1505 aa24.01■■□□□ 1.43
CPPED1-204ENST00000539677 FGD5Q6ZNL6 1462 aa24■■□□□ 1.43
CPPED1-204ENST00000539677 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
CPPED1-204ENST00000539677 WDR97A6NE52 1622 aa23.95■■□□□ 1.43
CPPED1-204ENST00000539677 TDRD9Q8NDG6 1382 aaKnown RBP23.92■■□□□ 1.42
CPPED1-204ENST00000539677 TRIM41Q8WV44 630 aa23.9■■□□□ 1.42
CPPED1-204ENST00000539677 CHD1O14646 1710 aa23.84■■□□□ 1.41
CPPED1-204ENST00000539677 FBLN2P98095 1184 aa23.81■■□□□ 1.4
CPPED1-204ENST00000539677 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
CPPED1-204ENST00000539677 SNAPC4Q5SXM2 1469 aa23.79■■□□□ 1.4
CPPED1-204ENST00000539677 MAGI1Q96QZ7 1491 aaPredicted RBP23.79■■□□□ 1.4
CPPED1-204ENST00000539677 ABCA10Q8WWZ4 1543 aa23.78■■□□□ 1.4
CPPED1-204ENST00000539677 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
CPPED1-204ENST00000539677 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
CPPED1-204ENST00000539677 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
CPPED1-204ENST00000539677 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
CPPED1-204ENST00000539677 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
CPPED1-204ENST00000539677 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
CPPED1-204ENST00000539677 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
CPPED1-204ENST00000539677 CHMP7Q8WUX9 453 aaPredicted RBP23.73■■□□□ 1.39
CPPED1-204ENST00000539677 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
CPPED1-204ENST00000539677 PBRM1Q86U86 1689 aa23.69■■□□□ 1.38
CPPED1-204ENST00000539677 ABCA5Q8WWZ7 1642 aa23.69■■□□□ 1.38
CPPED1-204ENST00000539677 SYNJ2O15056 1496 aa23.68■■□□□ 1.38
CPPED1-204ENST00000539677 SYNJ1O43426 1573 aa23.66■■□□□ 1.38
CPPED1-204ENST00000539677 CLASP1Q7Z460 1538 aa23.6■■□□□ 1.37
CPPED1-204ENST00000539677 CYB5RLQ6IPT4 315 aa23.56■■□□□ 1.36
CPPED1-204ENST00000539677 ARAP1Q96P48 1450 aa23.52■■□□□ 1.36
CPPED1-204ENST00000539677 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
CPPED1-204ENST00000539677 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
CPPED1-204ENST00000539677 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
CPPED1-204ENST00000539677 GRIN2AQ12879 1464 aa23.48■■□□□ 1.35
CPPED1-204ENST00000539677 NUP160Q12769 1436 aa23.41■■□□□ 1.34
CPPED1-204ENST00000539677 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
CPPED1-204ENST00000539677 KIF27Q86VH2 1401 aa23.3■■□□□ 1.32
CPPED1-204ENST00000539677 SHROOM2Q13796 1616 aa23.26■■□□□ 1.31
CPPED1-204ENST00000539677 IGF1RP08069 1367 aa23.25■■□□□ 1.31
CPPED1-204ENST00000539677 ERCC6L2Q5T890 1561 aa23.2■■□□□ 1.3
CPPED1-204ENST00000539677 TRHP20396 242 aaPredicted RBP23.2■■□□□ 1.3
CPPED1-204ENST00000539677 CUL7Q14999 1698 aa23.19■■□□□ 1.3
CPPED1-204ENST00000539677 JPH4Q96JJ6 628 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms