RNA–Protein interactions for RNA: ENST00000539580.5

ISCU-207, Transcript of iron-sulfur cluster assembly enzyme, humanhuman

TSL 1 (best)

Gene ISCU, Length 1,169 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ISCU-207ENST00000539580 NISCHQ9Y2I1 1504 aa46.54■■■■■ 5.04
ISCU-207ENST00000539580 ABCC9O60706 1549 aa41.68■■■■■ 4.26
ISCU-207ENST00000539580 CCDC180Q9P1Z9 1646 aa41.66■■■■■ 4.26
ISCU-207ENST00000539580 RB1CC1Q8TDY2 1594 aa39.65■■■■□ 3.94
ISCU-207ENST00000539580 NACADO15069 1562 aa39.42■■■■□ 3.9
ISCU-207ENST00000539580 DNAJC5BQ9UF47 199 aa39.2■■■■□ 3.87
ISCU-207ENST00000539580 DCAF8L2P0C7V8 631 aa39.09■■■■□ 3.85
ISCU-207ENST00000539580 MYO15BQ96JP2 1530 aa38.97■■■■□ 3.83
ISCU-207ENST00000539580 PABPN1Q86U42 306 aaKnown RBP eCLIP38.82■■■■□ 3.8
ISCU-207ENST00000539580 UNC13AQ9UPW8 1703 aa38.72■■■■□ 3.79
ISCU-207ENST00000539580 BICRAQ9NZM4 1560 aa38.61■■■■□ 3.77
ISCU-207ENST00000539580 ZCCHC6Q5VYS8 1495 aaKnown RBP38.6■■■■□ 3.77
ISCU-207ENST00000539580 DCAF1Q9Y4B6 1507 aa38.47■■■■□ 3.75
ISCU-207ENST00000539580 SHROOM4Q9ULL8 1493 aa38.06■■■■□ 3.68
ISCU-207ENST00000539580 SCRIBQ14160 1630 aa37.96■■■■□ 3.67
ISCU-207ENST00000539580 CC2D2AQ9P2K1 1620 aa37.65■■■■□ 3.62
ISCU-207ENST00000539580 EIF4G1Q04637 1599 aaKnown RBP37.6■■■■□ 3.61
ISCU-207ENST00000539580 CECR2Q9BXF3 1484 aa37.56■■■■□ 3.6
ISCU-207ENST00000539580 NCAPD3P42695 1498 aa36.47■■■■□ 3.43
ISCU-207ENST00000539580 ATAD2BQ9ULI0 1458 aa36.34■■■■□ 3.41
ISCU-207ENST00000539580 SMARCA4P51532 1647 aa36.25■■■■□ 3.39
ISCU-207ENST00000539580 SMARCA2P51531 1590 aa36.17■■■■□ 3.38
ISCU-207ENST00000539580 HMGXB3Q12766 1538 aa36.16■■■■□ 3.38
ISCU-207ENST00000539580 BAZ1AQ9NRL2 1556 aaPredicted RBP36.07■■■■□ 3.37
ISCU-207ENST00000539580 PEG3Q9GZU2 1588 aa35.98■■■■□ 3.35
ISCU-207ENST00000539580 CUX2O14529 1486 aa35.93■■■■□ 3.34
ISCU-207ENST00000539580 DNAJC5Q9H3Z4 198 aa35.92■■■■□ 3.34
ISCU-207ENST00000539580 ERCC6Q03468 1493 aa35.92■■■■□ 3.34
ISCU-207ENST00000539580 BAZ1BQ9UIG0 1483 aaKnown RBP35.92■■■■□ 3.34
ISCU-207ENST00000539580 MROH2BQ7Z745 1585 aa35.86■■■■□ 3.33
ISCU-207ENST00000539580 NESP48681 1621 aa35.85■■■■□ 3.33
ISCU-207ENST00000539580 LAMC3Q9Y6N6 1575 aa35.55■■■■□ 3.28
ISCU-207ENST00000539580 THOC2Q8NI27 1593 aaKnown RBP35.47■■■■□ 3.27
ISCU-207ENST00000539580 WIZO95785 1651 aa35.36■■■■□ 3.25
ISCU-207ENST00000539580 PDS5BQ9NTI5 1447 aa35.35■■■■□ 3.25
ISCU-207ENST00000539580 CADPSQ9ULU8 1353 aa35.33■■■■□ 3.25
ISCU-207ENST00000539580 KIF21AQ7Z4S6 1674 aa35.29■■■■□ 3.24
ISCU-207ENST00000539580 RSF1Q96T23 1441 aaPredicted RBP35.15■■■■□ 3.22
ISCU-207ENST00000539580 MRC2Q9UBG0 1479 aa35.06■■■■□ 3.2
ISCU-207ENST00000539580 WDR62O43379 1518 aa35.01■■■■□ 3.19
ISCU-207ENST00000539580 CFTRP13569 1480 aa34.96■■■■□ 3.19
ISCU-207ENST00000539580 TOP2AP11388 1531 aaKnown RBP34.96■■■■□ 3.19
ISCU-207ENST00000539580 FANCD2Q9BXW9 1451 aa34.9■■■■□ 3.18
ISCU-207ENST00000539580 CEP164Q9UPV0 1460 aa34.9■■■■□ 3.18
ISCU-207ENST00000539580 URB2Q14146 1524 aaKnown RBP34.65■■■■□ 3.14
ISCU-207ENST00000539580 CCDC88BA6NC98 1476 aa34.58■■■■□ 3.13
ISCU-207ENST00000539580 PRDM2Q13029 1718 aa34.41■■■■□ 3.1
ISCU-207ENST00000539580 TOPBP1Q92547 1522 aa34.25■■■■□ 3.07
ISCU-207ENST00000539580 OSCARQ8IYS5 282 aa34.25■■■■□ 3.07
ISCU-207ENST00000539580 IFT140Q96RY7 1462 aa34.23■■■■□ 3.07
ISCU-207ENST00000539580 TRIM41Q8WV44 630 aa34.23■■■■□ 3.07
ISCU-207ENST00000539580 ZNF608Q9ULD9 1512 aaPredicted RBP34.22■■■■□ 3.07
ISCU-207ENST00000539580 ABCC8Q09428 1581 aa34.12■■■■□ 3.05
ISCU-207ENST00000539580 DNMBPQ6XZF7 1577 aa34.1■■■■□ 3.05
ISCU-207ENST00000539580 EIF4G3O43432 1585 aaKnown RBP33.97■■■■□ 3.03
ISCU-207ENST00000539580 TARBP1Q13395 1621 aaKnown RBP33.96■■■■□ 3.03
ISCU-207ENST00000539580 POLA1P09884 1462 aaPredicted RBP33.92■■■■□ 3.02
ISCU-207ENST00000539580 AQRO60306 1485 aaKnown RBP eCLIP33.88■■■■□ 3.011e-8■■■■■ 40.9
ISCU-207ENST00000539580 RIMBP3CA6NJZ7 1639 aa33.81■■■■□ 3
ISCU-207ENST00000539580 RIMBP3BA6NNM3 1639 aa33.81■■■■□ 3
ISCU-207ENST00000539580 RIMBP3Q9UFD9 1639 aa33.81■■■■□ 3
ISCU-207ENST00000539580 RAD54L2Q9Y4B4 1467 aa33.78■■■■□ 3
ISCU-207ENST00000539580 ARHGEF11O15085 1522 aa33.75■■■□□ 2.99
ISCU-207ENST00000539580 SOGA1O94964 1423 aa33.71■■■□□ 2.99
ISCU-207ENST00000539580 CUX1P39880 1505 aa33.69■■■□□ 2.98
ISCU-207ENST00000539580 FGD5Q6ZNL6 1462 aa33.68■■■□□ 2.98
ISCU-207ENST00000539580 TDRD9Q8NDG6 1382 aaKnown RBP33.67■■■□□ 2.98
ISCU-207ENST00000539580 CHD1O14646 1710 aa33.64■■■□□ 2.98
ISCU-207ENST00000539580 WDR97A6NE52 1622 aa33.57■■■□□ 2.96
ISCU-207ENST00000539580 FBLN2P98095 1184 aa33.54■■■□□ 2.96
ISCU-207ENST00000539580 SNAPC4Q5SXM2 1469 aa33.52■■■□□ 2.96
ISCU-207ENST00000539580 SUPT5HO00267 1087 aaKnown RBP33.45■■■□□ 2.95
ISCU-207ENST00000539580 ARAP1Q96P48 1450 aa33.44■■■□□ 2.94
ISCU-207ENST00000539580 CYB5RLQ6IPT4 315 aa33.44■■■□□ 2.94
ISCU-207ENST00000539580 GRIN2BQ13224 1484 aa33.44■■■□□ 2.94
ISCU-207ENST00000539580 MAGI1Q96QZ7 1491 aaPredicted RBP33.44■■■□□ 2.94
ISCU-207ENST00000539580 CLASP1Q7Z460 1538 aa33.39■■■□□ 2.94
ISCU-207ENST00000539580 ABCA10Q8WWZ4 1543 aa33.33■■■□□ 2.93
ISCU-207ENST00000539580 SYNJ2O15056 1496 aa33.33■■■□□ 2.93
ISCU-207ENST00000539580 CHMP7Q8WUX9 453 aaPredicted RBP33.33■■■□□ 2.93
ISCU-207ENST00000539580 GAPVD1Q14C86 1478 aa33.31■■■□□ 2.92
ISCU-207ENST00000539580 SYNJ1O43426 1573 aa33.26■■■□□ 2.92
ISCU-207ENST00000539580 ABCA5Q8WWZ7 1642 aa33.26■■■□□ 2.91
ISCU-207ENST00000539580 PBRM1Q86U86 1689 aa33.21■■■□□ 2.91
ISCU-207ENST00000539580 WRNQ14191 1432 aaPredicted RBP eCLIP33.16■■■□□ 2.9
ISCU-207ENST00000539580 TOP2BQ02880 1626 aa33.11■■■□□ 2.89
ISCU-207ENST00000539580 BIVM-ERCC5R4GMW8 1640 aa33.1■■■□□ 2.89
ISCU-207ENST00000539580 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
ISCU-207ENST00000539580 ADAMTS12P58397 1594 aa32.99■■■□□ 2.87
ISCU-207ENST00000539580 TRHP20396 242 aaPredicted RBP32.98■■■□□ 2.87
ISCU-207ENST00000539580 NUP160Q12769 1436 aa32.96■■■□□ 2.87
ISCU-207ENST00000539580 FHAD1B1AJZ9 1412 aa32.91■■■□□ 2.86
ISCU-207ENST00000539580 CEP170Q5SW79 1584 aa32.9■■■□□ 2.86
ISCU-207ENST00000539580 ERICH3Q5RHP9 1530 aa32.88■■■□□ 2.85
ISCU-207ENST00000539580 ERCC6L2Q5T890 1561 aa32.87■■■□□ 2.85
ISCU-207ENST00000539580 SHROOM2Q13796 1616 aa32.77■■■□□ 2.84
ISCU-207ENST00000539580 PRG4Q92954 1404 aaPredicted RBP32.58■■■□□ 2.81
ISCU-207ENST00000539580 JPH4Q96JJ6 628 aa32.55■■■□□ 2.8
ISCU-207ENST00000539580 RUSC2Q8N2Y8 1516 aa32.53■■■□□ 2.8
ISCU-207ENST00000539580 IGF1RP08069 1367 aa32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms