RNA–Protein interactions for RNA: ENST00000539405.1

CARS2-219, Transcript of cysteinyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene CARS2, Length 1,041 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARS2-219ENST00000539405 NISCHQ9Y2I1 1504 aa30.26■■■□□ 2.43
CARS2-219ENST00000539405 CCDC180Q9P1Z9 1646 aa27.16■■□□□ 1.94
CARS2-219ENST00000539405 ABCC9O60706 1549 aa26.53■■□□□ 1.84
CARS2-219ENST00000539405 RB1CC1Q8TDY2 1594 aa25.58■■□□□ 1.69
CARS2-219ENST00000539405 NACADO15069 1562 aa25.5■■□□□ 1.67
CARS2-219ENST00000539405 MYO15BQ96JP2 1530 aa25.34■■□□□ 1.65
CARS2-219ENST00000539405 ZCCHC6Q5VYS8 1495 aaKnown RBP25.21■■□□□ 1.63
CARS2-219ENST00000539405 DCAF1Q9Y4B6 1507 aa25.13■■□□□ 1.61
CARS2-219ENST00000539405 DCAF8L2P0C7V8 631 aa25.06■■□□□ 1.6
CARS2-219ENST00000539405 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
CARS2-219ENST00000539405 BICRAQ9NZM4 1560 aa24.78■■□□□ 1.56
CARS2-219ENST00000539405 SHROOM4Q9ULL8 1493 aa24.65■■□□□ 1.54
CARS2-219ENST00000539405 PABPN1Q86U42 306 aaKnown RBP eCLIP24.62■■□□□ 1.53
CARS2-219ENST00000539405 SCRIBQ14160 1630 aa24.59■■□□□ 1.53
CARS2-219ENST00000539405 DNAJC5BQ9UF47 199 aa24.42■■□□□ 1.5
CARS2-219ENST00000539405 EIF4G1Q04637 1599 aaKnown RBP24.15■■□□□ 1.46
CARS2-219ENST00000539405 CC2D2AQ9P2K1 1620 aa24.08■■□□□ 1.45
CARS2-219ENST00000539405 CECR2Q9BXF3 1484 aa23.91■■□□□ 1.42
CARS2-219ENST00000539405 SMARCA4P51532 1647 aa23.57■■□□□ 1.36
CARS2-219ENST00000539405 BAZ1AQ9NRL2 1556 aaPredicted RBP23.52■■□□□ 1.36
CARS2-219ENST00000539405 NCAPD3P42695 1498 aa23.48■■□□□ 1.35
CARS2-219ENST00000539405 SMARCA2P51531 1590 aa23.47■■□□□ 1.35
CARS2-219ENST00000539405 HMGXB3Q12766 1538 aa23.43■■□□□ 1.34
CARS2-219ENST00000539405 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
CARS2-219ENST00000539405 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
CARS2-219ENST00000539405 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
CARS2-219ENST00000539405 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
CARS2-219ENST00000539405 WIZO95785 1651 aa23.03■■□□□ 1.28
CARS2-219ENST00000539405 LAMC3Q9Y6N6 1575 aa22.97■■□□□ 1.27
CARS2-219ENST00000539405 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
CARS2-219ENST00000539405 RSF1Q96T23 1441 aaPredicted RBP22.9■■□□□ 1.26
CARS2-219ENST00000539405 NESP48681 1621 aa22.89■■□□□ 1.25
CARS2-219ENST00000539405 CUX2O14529 1486 aa22.85■■□□□ 1.25
CARS2-219ENST00000539405 TOP2AP11388 1531 aaKnown RBP22.84■■□□□ 1.25
CARS2-219ENST00000539405 THOC2Q8NI27 1593 aaKnown RBP22.76■■□□□ 1.23
CARS2-219ENST00000539405 KIF21AQ7Z4S6 1674 aa22.75■■□□□ 1.23
CARS2-219ENST00000539405 CADPSQ9ULU8 1353 aa22.72■■□□□ 1.23
CARS2-219ENST00000539405 PDS5BQ9NTI5 1447 aa22.72■■□□□ 1.23
CARS2-219ENST00000539405 CFTRP13569 1480 aa22.6■■□□□ 1.21
CARS2-219ENST00000539405 PRDM2Q13029 1718 aa22.59■■□□□ 1.21
CARS2-219ENST00000539405 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
CARS2-219ENST00000539405 CEP164Q9UPV0 1460 aa22.52■■□□□ 1.2
CARS2-219ENST00000539405 WDR62O43379 1518 aa22.52■■□□□ 1.19
CARS2-219ENST00000539405 FANCD2Q9BXW9 1451 aa22.48■■□□□ 1.19
CARS2-219ENST00000539405 CCDC88BA6NC98 1476 aa22.46■■□□□ 1.19
CARS2-219ENST00000539405 URB2Q14146 1524 aaKnown RBP22.27■■□□□ 1.16
CARS2-219ENST00000539405 DNAJC5Q9H3Z4 198 aa22.24■■□□□ 1.15
CARS2-219ENST00000539405 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
CARS2-219ENST00000539405 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
CARS2-219ENST00000539405 TOPBP1Q92547 1522 aa22.12■■□□□ 1.13
CARS2-219ENST00000539405 IFT140Q96RY7 1462 aa22.05■■□□□ 1.12
CARS2-219ENST00000539405 SUPT5HO00267 1087 aaKnown RBP21.96■■□□□ 1.11
CARS2-219ENST00000539405 TARBP1Q13395 1621 aaKnown RBP21.95■■□□□ 1.1
CARS2-219ENST00000539405 EIF4G3O43432 1585 aaKnown RBP21.93■■□□□ 1.1
CARS2-219ENST00000539405 POLA1P09884 1462 aaPredicted RBP21.91■■□□□ 1.1
CARS2-219ENST00000539405 ZNF608Q9ULD9 1512 aaPredicted RBP21.89■■□□□ 1.09
CARS2-219ENST00000539405 WDR97A6NE52 1622 aa21.88■■□□□ 1.09
CARS2-219ENST00000539405 CUX1P39880 1505 aa21.85■■□□□ 1.09
CARS2-219ENST00000539405 FGD5Q6ZNL6 1462 aa21.82■■□□□ 1.08
CARS2-219ENST00000539405 SOGA1O94964 1423 aa21.75■■□□□ 1.07
CARS2-219ENST00000539405 RAD54L2Q9Y4B4 1467 aa21.74■■□□□ 1.07
CARS2-219ENST00000539405 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
CARS2-219ENST00000539405 AQRO60306 1485 aaKnown RBP eCLIP21.71■■□□□ 1.07
CARS2-219ENST00000539405 OSCARQ8IYS5 282 aa21.69■■□□□ 1.06
CARS2-219ENST00000539405 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
CARS2-219ENST00000539405 CHD1O14646 1710 aa21.69■■□□□ 1.06
CARS2-219ENST00000539405 ABCA10Q8WWZ4 1543 aa21.64■■□□□ 1.05
CARS2-219ENST00000539405 PBRM1Q86U86 1689 aa21.63■■□□□ 1.05
CARS2-219ENST00000539405 ABCA5Q8WWZ7 1642 aa21.63■■□□□ 1.05
CARS2-219ENST00000539405 WRNQ14191 1432 aaPredicted RBP eCLIP21.63■■□□□ 1.05
CARS2-219ENST00000539405 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
CARS2-219ENST00000539405 MAGI1Q96QZ7 1491 aaPredicted RBP21.61■■□□□ 1.05
CARS2-219ENST00000539405 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
CARS2-219ENST00000539405 GRIN2BQ13224 1484 aa21.59■■□□□ 1.05
CARS2-219ENST00000539405 SNAPC4Q5SXM2 1469 aa21.58■■□□□ 1.04
CARS2-219ENST00000539405 GAPVD1Q14C86 1478 aa21.54■■□□□ 1.04
CARS2-219ENST00000539405 RIMBP3CA6NJZ7 1639 aa21.51■■□□□ 1.03
CARS2-219ENST00000539405 RIMBP3BA6NNM3 1639 aa21.51■■□□□ 1.03
CARS2-219ENST00000539405 RIMBP3Q9UFD9 1639 aa21.51■■□□□ 1.03
CARS2-219ENST00000539405 SYNJ2O15056 1496 aa21.51■■□□□ 1.03
CARS2-219ENST00000539405 ARHGEF11O15085 1522 aa21.47■■□□□ 1.03
CARS2-219ENST00000539405 CLASP1Q7Z460 1538 aa21.45■■□□□ 1.02
CARS2-219ENST00000539405 ADAMTS12P58397 1594 aa21.43■■□□□ 1.02
CARS2-219ENST00000539405 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
CARS2-219ENST00000539405 FBLN2P98095 1184 aa21.39■■□□□ 1.01
CARS2-219ENST00000539405 CHMP7Q8WUX9 453 aaPredicted RBP21.36■■□□□ 1.01
CARS2-219ENST00000539405 GRIN2AQ12879 1464 aa21.33■■□□□ 1.01
CARS2-219ENST00000539405 TRIM41Q8WV44 630 aa21.32■■□□□ 1
CARS2-219ENST00000539405 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
CARS2-219ENST00000539405 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
CARS2-219ENST00000539405 NUP160Q12769 1436 aa21.25■□□□□ 0.99
CARS2-219ENST00000539405 CEP170Q5SW79 1584 aa21.24■□□□□ 0.99
CARS2-219ENST00000539405 CUL7Q14999 1698 aa21.22■□□□□ 0.99
CARS2-219ENST00000539405 SHROOM2Q13796 1616 aa21.19■□□□□ 0.98
CARS2-219ENST00000539405 KIF27Q86VH2 1401 aa21.19■□□□□ 0.98
CARS2-219ENST00000539405 RUSC2Q8N2Y8 1516 aa21.14■□□□□ 0.97
CARS2-219ENST00000539405 CYB5RLQ6IPT4 315 aa21.09■□□□□ 0.97
CARS2-219ENST00000539405 IGF1RP08069 1367 aa21.06■□□□□ 0.96
CARS2-219ENST00000539405 ERCC6L2Q5T890 1561 aa21.03■□□□□ 0.96
CARS2-219ENST00000539405 KIAA0586Q9BVV6 1533 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms