RNA–Protein interactions for RNA: ENST00000539315.1

LINC00943-205, long intergenic non-protein coding RNA 943, humanhuman

TSL 3

Gene LINC00943, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-205ENST00000539315 NISCHQ9Y2I1 1504 aa46.96■■■■■ 5.11
LINC00943-205ENST00000539315 ABCC9O60706 1549 aa42.46■■■■■ 4.39
LINC00943-205ENST00000539315 CCDC180Q9P1Z9 1646 aa42.16■■■■■ 4.34
LINC00943-205ENST00000539315 RB1CC1Q8TDY2 1594 aa40.25■■■■■ 4.03
LINC00943-205ENST00000539315 DNAJC5BQ9UF47 199 aa40.17■■■■■ 4.02
LINC00943-205ENST00000539315 NACADO15069 1562 aa39.94■■■■□ 3.98
LINC00943-205ENST00000539315 DCAF8L2P0C7V8 631 aa39.74■■■■□ 3.95
LINC00943-205ENST00000539315 PABPN1Q86U42 306 aaKnown RBP eCLIP39.56■■■■□ 3.92
LINC00943-205ENST00000539315 UNC13AQ9UPW8 1703 aa39.4■■■■□ 3.9
LINC00943-205ENST00000539315 MYO15BQ96JP2 1530 aa39.34■■■■□ 3.89
LINC00943-205ENST00000539315 BICRAQ9NZM4 1560 aa39.18■■■■□ 3.86
LINC00943-205ENST00000539315 ZCCHC6Q5VYS8 1495 aaKnown RBP38.86■■■■□ 3.81
LINC00943-205ENST00000539315 DCAF1Q9Y4B6 1507 aa38.75■■■■□ 3.79
LINC00943-205ENST00000539315 SHROOM4Q9ULL8 1493 aa38.53■■■■□ 3.76
LINC00943-205ENST00000539315 SCRIBQ14160 1630 aa38.45■■■■□ 3.75
LINC00943-205ENST00000539315 CC2D2AQ9P2K1 1620 aa38.33■■■■□ 3.73
LINC00943-205ENST00000539315 CECR2Q9BXF3 1484 aa38.26■■■■□ 3.72
LINC00943-205ENST00000539315 EIF4G1Q04637 1599 aaKnown RBP38.19■■■■□ 3.7
LINC00943-205ENST00000539315 DNAJC5Q9H3Z4 198 aa36.98■■■■□ 3.51
LINC00943-205ENST00000539315 NCAPD3P42695 1498 aa36.93■■■■□ 3.5
LINC00943-205ENST00000539315 ATAD2BQ9ULI0 1458 aa36.79■■■■□ 3.48
LINC00943-205ENST00000539315 SMARCA4P51532 1647 aa36.66■■■■□ 3.46
LINC00943-205ENST00000539315 CUX2O14529 1486 aa36.64■■■■□ 3.46
LINC00943-205ENST00000539315 ERCC6Q03468 1493 aa36.62■■■■□ 3.45
LINC00943-205ENST00000539315 SMARCA2P51531 1590 aa36.61■■■■□ 3.45
LINC00943-205ENST00000539315 HMGXB3Q12766 1538 aa36.58■■■■□ 3.45
LINC00943-205ENST00000539315 NESP48681 1621 aa36.45■■■■□ 3.42
LINC00943-205ENST00000539315 BAZ1AQ9NRL2 1556 aaPredicted RBP36.41■■■■□ 3.42
LINC00943-205ENST00000539315 BAZ1BQ9UIG0 1483 aaKnown RBP36.37■■■■□ 3.41
LINC00943-205ENST00000539315 PEG3Q9GZU2 1588 aa36.31■■■■□ 3.4
LINC00943-205ENST00000539315 MROH2BQ7Z745 1585 aa36.21■■■■□ 3.39
LINC00943-205ENST00000539315 LAMC3Q9Y6N6 1575 aa36.06■■■■□ 3.36
LINC00943-205ENST00000539315 THOC2Q8NI27 1593 aaKnown RBP36.06■■■■□ 3.36
LINC00943-205ENST00000539315 KIF21AQ7Z4S6 1674 aa35.91■■■■□ 3.34
LINC00943-205ENST00000539315 PDS5BQ9NTI5 1447 aa35.89■■■■□ 3.34
LINC00943-205ENST00000539315 CADPSQ9ULU8 1353 aa35.79■■■■□ 3.32
LINC00943-205ENST00000539315 WIZO95785 1651 aa35.75■■■■□ 3.31
LINC00943-205ENST00000539315 MRC2Q9UBG0 1479 aa35.6■■■■□ 3.29
LINC00943-205ENST00000539315 WDR62O43379 1518 aa35.52■■■■□ 3.28
LINC00943-205ENST00000539315 CEP164Q9UPV0 1460 aa35.39■■■■□ 3.26
LINC00943-205ENST00000539315 RSF1Q96T23 1441 aaPredicted RBP35.39■■■■□ 3.26
LINC00943-205ENST00000539315 FANCD2Q9BXW9 1451 aa35.36■■■■□ 3.25
LINC00943-205ENST00000539315 CFTRP13569 1480 aa35.34■■■■□ 3.25
LINC00943-205ENST00000539315 TOP2AP11388 1531 aaKnown RBP35.24■■■■□ 3.23
LINC00943-205ENST00000539315 TRIM41Q8WV44 630 aa35.21■■■■□ 3.23
LINC00943-205ENST00000539315 URB2Q14146 1524 aaKnown RBP35.12■■■■□ 3.21
LINC00943-205ENST00000539315 OSCARQ8IYS5 282 aa34.99■■■■□ 3.19
LINC00943-205ENST00000539315 CCDC88BA6NC98 1476 aa34.9■■■■□ 3.18
LINC00943-205ENST00000539315 PRDM2Q13029 1718 aa34.88■■■■□ 3.17
LINC00943-205ENST00000539315 ZNF608Q9ULD9 1512 aaPredicted RBP34.74■■■■□ 3.15
LINC00943-205ENST00000539315 IFT140Q96RY7 1462 aa34.71■■■■□ 3.15
LINC00943-205ENST00000539315 TOPBP1Q92547 1522 aa34.68■■■■□ 3.14
LINC00943-205ENST00000539315 ABCC8Q09428 1581 aa34.54■■■■□ 3.12
LINC00943-205ENST00000539315 RIMBP3CA6NJZ7 1639 aa34.53■■■■□ 3.12
LINC00943-205ENST00000539315 RIMBP3BA6NNM3 1639 aa34.53■■■■□ 3.12
LINC00943-205ENST00000539315 RIMBP3Q9UFD9 1639 aa34.53■■■■□ 3.12
LINC00943-205ENST00000539315 DNMBPQ6XZF7 1577 aa34.49■■■■□ 3.11
LINC00943-205ENST00000539315 EIF4G3O43432 1585 aaKnown RBP34.45■■■■□ 3.11
LINC00943-205ENST00000539315 ARHGEF11O15085 1522 aa34.4■■■■□ 3.1
LINC00943-205ENST00000539315 AQRO60306 1485 aaKnown RBP eCLIP34.39■■■■□ 3.1
LINC00943-205ENST00000539315 TARBP1Q13395 1621 aaKnown RBP34.39■■■■□ 3.1
LINC00943-205ENST00000539315 POLA1P09884 1462 aaPredicted RBP34.32■■■■□ 3.08
LINC00943-205ENST00000539315 CHD1O14646 1710 aa34.26■■■■□ 3.07
LINC00943-205ENST00000539315 RAD54L2Q9Y4B4 1467 aa34.23■■■■□ 3.07
LINC00943-205ENST00000539315 CYB5RLQ6IPT4 315 aa34.21■■■■□ 3.07
LINC00943-205ENST00000539315 FBLN2P98095 1184 aa34.18■■■■□ 3.06
LINC00943-205ENST00000539315 SOGA1O94964 1423 aa34.16■■■■□ 3.06
LINC00943-205ENST00000539315 TDRD9Q8NDG6 1382 aaKnown RBP34.15■■■■□ 3.06
LINC00943-205ENST00000539315 ARAP1Q96P48 1450 aa34.07■■■■□ 3.05
LINC00943-205ENST00000539315 FGD5Q6ZNL6 1462 aa34.06■■■■□ 3.04
LINC00943-205ENST00000539315 CUX1P39880 1505 aa34.02■■■■□ 3.04
LINC00943-205ENST00000539315 SNAPC4Q5SXM2 1469 aa34■■■■□ 3.03
LINC00943-205ENST00000539315 WDR97A6NE52 1622 aa33.95■■■■□ 3.03
LINC00943-205ENST00000539315 CHMP7Q8WUX9 453 aaPredicted RBP33.9■■■■□ 3.02
LINC00943-205ENST00000539315 CLASP1Q7Z460 1538 aa33.88■■■■□ 3.01
LINC00943-205ENST00000539315 MAGI1Q96QZ7 1491 aaPredicted RBP33.88■■■■□ 3.01
LINC00943-205ENST00000539315 GRIN2BQ13224 1484 aa33.86■■■■□ 3.01
LINC00943-205ENST00000539315 TRHP20396 242 aaPredicted RBP33.85■■■■□ 3.01
LINC00943-205ENST00000539315 SYNJ1O43426 1573 aa33.79■■■■□ 3
LINC00943-205ENST00000539315 SYNJ2O15056 1496 aa33.77■■■■□ 3
LINC00943-205ENST00000539315 GAPVD1Q14C86 1478 aa33.72■■■□□ 2.99
LINC00943-205ENST00000539315 PBRM1Q86U86 1689 aa33.68■■■□□ 2.98
LINC00943-205ENST00000539315 ABCA10Q8WWZ4 1543 aa33.66■■■□□ 2.98
LINC00943-205ENST00000539315 SUPT5HO00267 1087 aaKnown RBP33.65■■■□□ 2.98
LINC00943-205ENST00000539315 ABCA5Q8WWZ7 1642 aa33.61■■■□□ 2.97
LINC00943-205ENST00000539315 WRNQ14191 1432 aaPredicted RBP eCLIP33.46■■■□□ 2.95
LINC00943-205ENST00000539315 GRIN2AQ12879 1464 aa33.43■■■□□ 2.94
LINC00943-205ENST00000539315 ERCC6L2Q5T890 1561 aa33.38■■■□□ 2.93
LINC00943-205ENST00000539315 TOP2BQ02880 1626 aa33.38■■■□□ 2.93
LINC00943-205ENST00000539315 BIVM-ERCC5R4GMW8 1640 aa33.37■■■□□ 2.93
LINC00943-205ENST00000539315 ADAMTS12P58397 1594 aa33.36■■■□□ 2.93
LINC00943-205ENST00000539315 NUP160Q12769 1436 aa33.36■■■□□ 2.93
LINC00943-205ENST00000539315 CEP170Q5SW79 1584 aa33.34■■■□□ 2.93
LINC00943-205ENST00000539315 FHAD1B1AJZ9 1412 aa33.29■■■□□ 2.92
LINC00943-205ENST00000539315 SHROOM2Q13796 1616 aa33.21■■■□□ 2.91
LINC00943-205ENST00000539315 ERICH3Q5RHP9 1530 aa33.21■■■□□ 2.91
LINC00943-205ENST00000539315 PRG4Q92954 1404 aaPredicted RBP33.04■■■□□ 2.88
LINC00943-205ENST00000539315 JPH4Q96JJ6 628 aa33.04■■■□□ 2.88
LINC00943-205ENST00000539315 AEBP2Q6ZN18 517 aaPredicted RBP32.98■■■□□ 2.87
LINC00943-205ENST00000539315 KIF13AQ9H1H9 1805 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms