RNA–Protein interactions for RNA: ENST00000539304.1

PEX5-212, Transcript of peroxisomal biogenesis factor 5, humanhuman

TSL 2

Gene PEX5, Length 708 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX5-212ENST00000539304 NISCHQ9Y2I1 1504 aa28.58■■■□□ 2.17
PEX5-212ENST00000539304 ABCC9O60706 1549 aa26.45■■□□□ 1.83
PEX5-212ENST00000539304 CCDC180Q9P1Z9 1646 aa25.85■■□□□ 1.73
PEX5-212ENST00000539304 DNAJC5BQ9UF47 199 aa25.25■■□□□ 1.63
PEX5-212ENST00000539304 RB1CC1Q8TDY2 1594 aa24.9■■□□□ 1.58
PEX5-212ENST00000539304 NACADO15069 1562 aa24.59■■□□□ 1.53
PEX5-212ENST00000539304 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
PEX5-212ENST00000539304 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
PEX5-212ENST00000539304 UNC13AQ9UPW8 1703 aa24.26■■□□□ 1.47
PEX5-212ENST00000539304 BICRAQ9NZM4 1560 aa24.18■■□□□ 1.46
PEX5-212ENST00000539304 MYO15BQ96JP2 1530 aa24.05■■□□□ 1.44
PEX5-212ENST00000539304 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
PEX5-212ENST00000539304 CC2D2AQ9P2K1 1620 aa23.84■■□□□ 1.41
PEX5-212ENST00000539304 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
PEX5-212ENST00000539304 EIF4G1Q04637 1599 aaKnown RBP23.66■■□□□ 1.38
PEX5-212ENST00000539304 ZCCHC6Q5VYS8 1495 aaKnown RBP23.58■■□□□ 1.37
PEX5-212ENST00000539304 DNAJC5Q9H3Z4 198 aa23.58■■□□□ 1.37
PEX5-212ENST00000539304 SCRIBQ14160 1630 aa23.58■■□□□ 1.36
PEX5-212ENST00000539304 DCAF1Q9Y4B6 1507 aa23.55■■□□□ 1.36
PEX5-212ENST00000539304 CUX2O14529 1486 aa23■■□□□ 1.27
PEX5-212ENST00000539304 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
PEX5-212ENST00000539304 NCAPD3P42695 1498 aa22.71■■□□□ 1.23
PEX5-212ENST00000539304 ATAD2BQ9ULI0 1458 aa22.58■■□□□ 1.2
PEX5-212ENST00000539304 NESP48681 1621 aa22.55■■□□□ 1.2
PEX5-212ENST00000539304 HMGXB3Q12766 1538 aa22.5■■□□□ 1.19
PEX5-212ENST00000539304 SMARCA2P51531 1590 aa22.48■■□□□ 1.19
PEX5-212ENST00000539304 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
PEX5-212ENST00000539304 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
PEX5-212ENST00000539304 TRIM41Q8WV44 630 aa22.4■■□□□ 1.18
PEX5-212ENST00000539304 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
PEX5-212ENST00000539304 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
PEX5-212ENST00000539304 BAZ1AQ9NRL2 1556 aaPredicted RBP22.23■■□□□ 1.15
PEX5-212ENST00000539304 KIF21AQ7Z4S6 1674 aa22.21■■□□□ 1.15
PEX5-212ENST00000539304 PDS5BQ9NTI5 1447 aa22.2■■□□□ 1.14
PEX5-212ENST00000539304 PEG3Q9GZU2 1588 aa22.18■■□□□ 1.14
PEX5-212ENST00000539304 MRC2Q9UBG0 1479 aa22.05■■□□□ 1.12
PEX5-212ENST00000539304 MROH2BQ7Z745 1585 aa22.02■■□□□ 1.12
PEX5-212ENST00000539304 WDR62O43379 1518 aa22.01■■□□□ 1.11
PEX5-212ENST00000539304 CADPSQ9ULU8 1353 aa22■■□□□ 1.11
PEX5-212ENST00000539304 CEP164Q9UPV0 1460 aa21.86■■□□□ 1.09
PEX5-212ENST00000539304 OSCARQ8IYS5 282 aa21.85■■□□□ 1.09
PEX5-212ENST00000539304 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.08
PEX5-212ENST00000539304 WIZO95785 1651 aa21.72■■□□□ 1.07
PEX5-212ENST00000539304 CFTRP13569 1480 aa21.64■■□□□ 1.06
PEX5-212ENST00000539304 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
PEX5-212ENST00000539304 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
PEX5-212ENST00000539304 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
PEX5-212ENST00000539304 URB2Q14146 1524 aaKnown RBP21.61■■□□□ 1.05
PEX5-212ENST00000539304 ARHGEF11O15085 1522 aa21.52■■□□□ 1.04
PEX5-212ENST00000539304 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
PEX5-212ENST00000539304 IFT140Q96RY7 1462 aa21.43■■□□□ 1.02
PEX5-212ENST00000539304 TOP2AP11388 1531 aaKnown RBP21.43■■□□□ 1.02
PEX5-212ENST00000539304 CYB5RLQ6IPT4 315 aa21.4■■□□□ 1.02
PEX5-212ENST00000539304 RSF1Q96T23 1441 aaPredicted RBP21.37■■□□□ 1.01
PEX5-212ENST00000539304 TRHP20396 242 aaPredicted RBP21.36■■□□□ 1.01
PEX5-212ENST00000539304 PRDM2Q13029 1718 aa21.32■■□□□ 1
PEX5-212ENST00000539304 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
PEX5-212ENST00000539304 TOPBP1Q92547 1522 aa21.29■■□□□ 1
PEX5-212ENST00000539304 ARAP1Q96P48 1450 aa21.27■■□□□ 1
PEX5-212ENST00000539304 CHD1O14646 1710 aa21.21■□□□□ 0.99
PEX5-212ENST00000539304 FBLN2P98095 1184 aa21.19■□□□□ 0.98
PEX5-212ENST00000539304 AQRO60306 1485 aaKnown RBP eCLIP21.19■□□□□ 0.98
PEX5-212ENST00000539304 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
PEX5-212ENST00000539304 CCDC88BA6NC98 1476 aa21.18■□□□□ 0.98
PEX5-212ENST00000539304 DNMBPQ6XZF7 1577 aa21.17■□□□□ 0.98
PEX5-212ENST00000539304 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
PEX5-212ENST00000539304 TARBP1Q13395 1621 aaKnown RBP21.12■□□□□ 0.97
PEX5-212ENST00000539304 POLA1P09884 1462 aaPredicted RBP21.05■□□□□ 0.96
PEX5-212ENST00000539304 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
PEX5-212ENST00000539304 SNAPC4Q5SXM2 1469 aa20.98■□□□□ 0.95
PEX5-212ENST00000539304 CLASP1Q7Z460 1538 aa20.98■□□□□ 0.95
PEX5-212ENST00000539304 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
PEX5-212ENST00000539304 SOGA1O94964 1423 aa20.94■□□□□ 0.94
PEX5-212ENST00000539304 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
PEX5-212ENST00000539304 CHMP7Q8WUX9 453 aaPredicted RBP20.92■□□□□ 0.94
PEX5-212ENST00000539304 WDR97A6NE52 1622 aa20.87■□□□□ 0.93
PEX5-212ENST00000539304 MAGI1Q96QZ7 1491 aaPredicted RBP20.87■□□□□ 0.93
PEX5-212ENST00000539304 FGD5Q6ZNL6 1462 aa20.85■□□□□ 0.93
PEX5-212ENST00000539304 SYNJ2O15056 1496 aa20.82■□□□□ 0.92
PEX5-212ENST00000539304 GRIN2BQ13224 1484 aa20.82■□□□□ 0.92
PEX5-212ENST00000539304 GAPVD1Q14C86 1478 aa20.81■□□□□ 0.92
PEX5-212ENST00000539304 CUX1P39880 1505 aa20.73■□□□□ 0.91
PEX5-212ENST00000539304 PBRM1Q86U86 1689 aa20.67■□□□□ 0.9
PEX5-212ENST00000539304 ERCC6L2Q5T890 1561 aa20.63■□□□□ 0.89
PEX5-212ENST00000539304 ABCA5Q8WWZ7 1642 aa20.57■□□□□ 0.88
PEX5-212ENST00000539304 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
PEX5-212ENST00000539304 ABCA10Q8WWZ4 1543 aa20.55■□□□□ 0.88
PEX5-212ENST00000539304 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
PEX5-212ENST00000539304 NUP160Q12769 1436 aa20.5■□□□□ 0.87
PEX5-212ENST00000539304 ADAMTS12P58397 1594 aa20.48■□□□□ 0.87
PEX5-212ENST00000539304 SHROOM2Q13796 1616 aa20.44■□□□□ 0.86
PEX5-212ENST00000539304 KIF13AQ9H1H9 1805 aa20.43■□□□□ 0.86
PEX5-212ENST00000539304 FHAD1B1AJZ9 1412 aa20.39■□□□□ 0.85
PEX5-212ENST00000539304 WRNQ14191 1432 aaPredicted RBP eCLIP20.38■□□□□ 0.85
PEX5-212ENST00000539304 PRG4Q92954 1404 aaPredicted RBP20.36■□□□□ 0.85
PEX5-212ENST00000539304 FAM69CQ0P6D2 419 aa20.35■□□□□ 0.85
PEX5-212ENST00000539304 ABCC10Q5T3U5 1492 aa20.33■□□□□ 0.85
PEX5-212ENST00000539304 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
PEX5-212ENST00000539304 NPM1P06748 294 aaKnown RBP eCLIP20.29■□□□□ 0.84
PEX5-212ENST00000539304 KDM4FA0A1W2PPD8 638 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms