RNA–Protein interactions for RNA: ENST00000539284.2

VAV1-202, Transcript of vav guanine nucleotide exchange factor 1, humanhuman

TSL 5 BASIC

Gene VAV1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV1-202ENST00000539284 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
VAV1-202ENST00000539284 CCDC180Q9P1Z9 1646 aa26.22■■□□□ 1.79
VAV1-202ENST00000539284 ZCCHC6Q5VYS8 1495 aaKnown RBP25.01■■□□□ 1.59
VAV1-202ENST00000539284 DCAF1Q9Y4B6 1507 aa24.89■■□□□ 1.57
VAV1-202ENST00000539284 MYO15BQ96JP2 1530 aa24.68■■□□□ 1.54
VAV1-202ENST00000539284 NACADO15069 1562 aa24.32■■□□□ 1.48
VAV1-202ENST00000539284 ABCC9O60706 1549 aa24.2■■□□□ 1.46
VAV1-202ENST00000539284 RB1CC1Q8TDY2 1594 aa24.04■■□□□ 1.44
VAV1-202ENST00000539284 DCAF8L2P0C7V8 631 aa23.83■■□□□ 1.41
VAV1-202ENST00000539284 SCRIBQ14160 1630 aa23.62■■□□□ 1.37
VAV1-202ENST00000539284 SHROOM4Q9ULL8 1493 aa23.57■■□□□ 1.36
VAV1-202ENST00000539284 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
VAV1-202ENST00000539284 BICRAQ9NZM4 1560 aa23.24■■□□□ 1.31
VAV1-202ENST00000539284 BAZ1AQ9NRL2 1556 aaPredicted RBP23.01■■□□□ 1.27
VAV1-202ENST00000539284 RSF1Q96T23 1441 aaPredicted RBP22.92■■□□□ 1.26
VAV1-202ENST00000539284 SMARCA4P51532 1647 aa22.87■■□□□ 1.25
VAV1-202ENST00000539284 CECR2Q9BXF3 1484 aa22.85■■□□□ 1.25
VAV1-202ENST00000539284 MROH2BQ7Z745 1585 aa22.81■■□□□ 1.24
VAV1-202ENST00000539284 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
VAV1-202ENST00000539284 SUPT5HO00267 1087 aaKnown RBP22.67■■□□□ 1.22
VAV1-202ENST00000539284 PABPN1Q86U42 306 aaKnown RBP eCLIP22.62■■□□□ 1.21
VAV1-202ENST00000539284 WIZO95785 1651 aa22.62■■□□□ 1.21
VAV1-202ENST00000539284 TOP2AP11388 1531 aaKnown RBP22.58■■□□□ 1.2
VAV1-202ENST00000539284 SMARCA2P51531 1590 aa22.56■■□□□ 1.2
VAV1-202ENST00000539284 EIF4G1Q04637 1599 aaKnown RBP22.5■■□□□ 1.19
VAV1-202ENST00000539284 ATAD2BQ9ULI0 1458 aa22.43■■□□□ 1.18
VAV1-202ENST00000539284 HMGXB3Q12766 1538 aa22.42■■□□□ 1.18
VAV1-202ENST00000539284 NCAPD3P42695 1498 aa22.36■■□□□ 1.17
VAV1-202ENST00000539284 BAZ1BQ9UIG0 1483 aaKnown RBP22.26■■□□□ 1.15
VAV1-202ENST00000539284 CCDC88BA6NC98 1476 aa22.18■■□□□ 1.14
VAV1-202ENST00000539284 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
VAV1-202ENST00000539284 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
VAV1-202ENST00000539284 PRDM2Q13029 1718 aa21.93■■□□□ 1.1
VAV1-202ENST00000539284 CFTRP13569 1480 aa21.81■■□□□ 1.08
VAV1-202ENST00000539284 CADPSQ9ULU8 1353 aa21.65■■□□□ 1.06
VAV1-202ENST00000539284 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
VAV1-202ENST00000539284 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
VAV1-202ENST00000539284 TOP2BQ02880 1626 aa21.57■■□□□ 1.04
VAV1-202ENST00000539284 WRNQ14191 1432 aaPredicted RBP eCLIP21.56■■□□□ 1.04
VAV1-202ENST00000539284 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
VAV1-202ENST00000539284 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
VAV1-202ENST00000539284 EEA1Q15075 1411 aa21.49■■□□□ 1.03
VAV1-202ENST00000539284 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
VAV1-202ENST00000539284 FANCD2Q9BXW9 1451 aa21.37■■□□□ 1.01
VAV1-202ENST00000539284 CUX1P39880 1505 aa21.37■■□□□ 1.01
VAV1-202ENST00000539284 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
VAV1-202ENST00000539284 DNMBPQ6XZF7 1577 aa21.33■■□□□ 1.01
VAV1-202ENST00000539284 CEP164Q9UPV0 1460 aa21.28■■□□□ 1
VAV1-202ENST00000539284 NESP48681 1621 aa21.25■□□□□ 0.99
VAV1-202ENST00000539284 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
VAV1-202ENST00000539284 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
VAV1-202ENST00000539284 TOPBP1Q92547 1522 aa21.18■□□□□ 0.98
VAV1-202ENST00000539284 KIF21BO75037 1637 aa21.17■□□□□ 0.98
VAV1-202ENST00000539284 SOGA1O94964 1423 aa21.13■□□□□ 0.97
VAV1-202ENST00000539284 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
VAV1-202ENST00000539284 URB2Q14146 1524 aaKnown RBP21.11■□□□□ 0.97
VAV1-202ENST00000539284 FGD5Q6ZNL6 1462 aa21.11■□□□□ 0.97
VAV1-202ENST00000539284 MRC2Q9UBG0 1479 aa21.09■□□□□ 0.97
VAV1-202ENST00000539284 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.97
VAV1-202ENST00000539284 KIF27Q86VH2 1401 aa21.07■□□□□ 0.96
VAV1-202ENST00000539284 WDR62O43379 1518 aa21.07■□□□□ 0.96
VAV1-202ENST00000539284 ERICH3Q5RHP9 1530 aa21.06■□□□□ 0.96
VAV1-202ENST00000539284 POLA1P09884 1462 aaPredicted RBP21.04■□□□□ 0.96
VAV1-202ENST00000539284 CSRNP3Q8WYN3 585 aa21.04■□□□□ 0.96
VAV1-202ENST00000539284 RUSC2Q8N2Y8 1516 aa21.01■□□□□ 0.95
VAV1-202ENST00000539284 GOLGA3Q08378 1498 aa21■□□□□ 0.95
VAV1-202ENST00000539284 PRXQ9BXM0 1461 aa20.98■□□□□ 0.95
VAV1-202ENST00000539284 THOC2Q8NI27 1593 aaKnown RBP20.98■□□□□ 0.95
VAV1-202ENST00000539284 TARBP1Q13395 1621 aaKnown RBP20.96■□□□□ 0.95
VAV1-202ENST00000539284 ABCA5Q8WWZ7 1642 aa20.95■□□□□ 0.94
VAV1-202ENST00000539284 TNIKQ9UKE5 1360 aa20.95■□□□□ 0.94
VAV1-202ENST00000539284 CUL7Q14999 1698 aa20.93■□□□□ 0.94
VAV1-202ENST00000539284 CUX2O14529 1486 aa20.9■□□□□ 0.94
VAV1-202ENST00000539284 IFT140Q96RY7 1462 aa20.87■□□□□ 0.93
VAV1-202ENST00000539284 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
VAV1-202ENST00000539284 IGF1RP08069 1367 aa20.83■□□□□ 0.93
VAV1-202ENST00000539284 ERCC6Q03468 1493 aa20.82■□□□□ 0.92
VAV1-202ENST00000539284 FAM9AQ8IZU1 332 aaPredicted RBP20.81■□□□□ 0.92
VAV1-202ENST00000539284 RAD54L2Q9Y4B4 1467 aa20.81■□□□□ 0.92
VAV1-202ENST00000539284 RAPGEF2Q9Y4G8 1499 aa20.76■□□□□ 0.91
VAV1-202ENST00000539284 PBRM1Q86U86 1689 aa20.76■□□□□ 0.91
VAV1-202ENST00000539284 GAPVD1Q14C86 1478 aa20.74■□□□□ 0.91
VAV1-202ENST00000539284 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
VAV1-202ENST00000539284 CEP162Q5TB80 1403 aa20.7■□□□□ 0.9
VAV1-202ENST00000539284 GRIN2BQ13224 1484 aa20.65■□□□□ 0.9
VAV1-202ENST00000539284 ADAMTS12P58397 1594 aa20.64■□□□□ 0.89
VAV1-202ENST00000539284 CTTNBP2Q8WZ74 1663 aa20.63■□□□□ 0.89
VAV1-202ENST00000539284 EIF4G3O43432 1585 aaKnown RBP20.61■□□□□ 0.89
VAV1-202ENST00000539284 FHAD1B1AJZ9 1412 aa20.6■□□□□ 0.89
VAV1-202ENST00000539284 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
VAV1-202ENST00000539284 UBTFP17480 764 aaKnown RBP20.55■□□□□ 0.88
VAV1-202ENST00000539284 CLIP1P30622 1438 aa20.55■□□□□ 0.88
VAV1-202ENST00000539284 TDRD9Q8NDG6 1382 aaKnown RBP20.55■□□□□ 0.88
VAV1-202ENST00000539284 EFCAB5A4FU69 1503 aa20.54■□□□□ 0.88
VAV1-202ENST00000539284 ZNF608Q9ULD9 1512 aaPredicted RBP20.5■□□□□ 0.87
VAV1-202ENST00000539284 AQRO60306 1485 aaKnown RBP eCLIP20.48■□□□□ 0.876e-6■□□□□ 8.5
VAV1-202ENST00000539284 VPS8Q8N3P4 1428 aa20.46■□□□□ 0.87
VAV1-202ENST00000539284 SAMD9Q5K651 1589 aa20.43■□□□□ 0.86
VAV1-202ENST00000539284 SYNJ2O15056 1496 aa20.42■□□□□ 0.86
VAV1-202ENST00000539284 ARAP1Q96P48 1450 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms