RNA–Protein interactions for RNA: ENST00000539268.1

CCND2P1-201, Transcript of cyclin D2 pseudogene 1, humanhuman

BASIC

Gene CCND2P1, Length 799 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND2P1-201ENST00000539268 NISCHQ9Y2I1 1504 aa23.79■■□□□ 1.4
CCND2P1-201ENST00000539268 ABCC9O60706 1549 aa21.7■■□□□ 1.06
CCND2P1-201ENST00000539268 CCDC180Q9P1Z9 1646 aa21.34■■□□□ 1.01
CCND2P1-201ENST00000539268 DNAJC5BQ9UF47 199 aa20.69■□□□□ 0.9
CCND2P1-201ENST00000539268 RB1CC1Q8TDY2 1594 aa20.42■□□□□ 0.86
CCND2P1-201ENST00000539268 NACADO15069 1562 aa20.23■□□□□ 0.83
CCND2P1-201ENST00000539268 PABPN1Q86U42 306 aaKnown RBP eCLIP20.2■□□□□ 0.82
CCND2P1-201ENST00000539268 DCAF8L2P0C7V8 631 aa20.14■□□□□ 0.81
CCND2P1-201ENST00000539268 UNC13AQ9UPW8 1703 aa20.08■□□□□ 0.81
CCND2P1-201ENST00000539268 BICRAQ9NZM4 1560 aa20.01■□□□□ 0.79
CCND2P1-201ENST00000539268 MYO15BQ96JP2 1530 aa19.87■□□□□ 0.77
CCND2P1-201ENST00000539268 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
CCND2P1-201ENST00000539268 DCAF1Q9Y4B6 1507 aa19.56■□□□□ 0.72
CCND2P1-201ENST00000539268 CC2D2AQ9P2K1 1620 aa19.55■□□□□ 0.72
CCND2P1-201ENST00000539268 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
CCND2P1-201ENST00000539268 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.72
CCND2P1-201ENST00000539268 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
CCND2P1-201ENST00000539268 EIF4G1Q04637 1599 aaKnown RBP19.45■□□□□ 0.7
CCND2P1-201ENST00000539268 DNAJC5Q9H3Z4 198 aa18.99■□□□□ 0.63
CCND2P1-201ENST00000539268 NCAPD3P42695 1498 aa18.74■□□□□ 0.59
CCND2P1-201ENST00000539268 ATAD2BQ9ULI0 1458 aa18.69■□□□□ 0.58
CCND2P1-201ENST00000539268 CUX2O14529 1486 aa18.66■□□□□ 0.58
CCND2P1-201ENST00000539268 NESP48681 1621 aa18.63■□□□□ 0.57
CCND2P1-201ENST00000539268 ERCC6Q03468 1493 aa18.62■□□□□ 0.57
CCND2P1-201ENST00000539268 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
CCND2P1-201ENST00000539268 HMGXB3Q12766 1538 aa18.54■□□□□ 0.56
CCND2P1-201ENST00000539268 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
CCND2P1-201ENST00000539268 BAZ1BQ9UIG0 1483 aaKnown RBP18.44■□□□□ 0.54
CCND2P1-201ENST00000539268 THOC2Q8NI27 1593 aaKnown RBP18.42■□□□□ 0.54
CCND2P1-201ENST00000539268 BAZ1AQ9NRL2 1556 aaPredicted RBP18.41■□□□□ 0.54
CCND2P1-201ENST00000539268 PEG3Q9GZU2 1588 aa18.4■□□□□ 0.54
CCND2P1-201ENST00000539268 MROH2BQ7Z745 1585 aa18.39■□□□□ 0.53
CCND2P1-201ENST00000539268 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
CCND2P1-201ENST00000539268 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
CCND2P1-201ENST00000539268 PDS5BQ9NTI5 1447 aa18.17■□□□□ 0.5
CCND2P1-201ENST00000539268 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
CCND2P1-201ENST00000539268 WIZO95785 1651 aa18.14■□□□□ 0.49
CCND2P1-201ENST00000539268 MRC2Q9UBG0 1479 aa18.09■□□□□ 0.49
CCND2P1-201ENST00000539268 WDR62O43379 1518 aa18.08■□□□□ 0.48
CCND2P1-201ENST00000539268 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
CCND2P1-201ENST00000539268 FANCD2Q9BXW9 1451 aa17.96■□□□□ 0.47
CCND2P1-201ENST00000539268 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
CCND2P1-201ENST00000539268 CFTRP13569 1480 aa17.92■□□□□ 0.46
CCND2P1-201ENST00000539268 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
CCND2P1-201ENST00000539268 URB2Q14146 1524 aaKnown RBP17.9■□□□□ 0.46
CCND2P1-201ENST00000539268 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
CCND2P1-201ENST00000539268 OSCARQ8IYS5 282 aa17.78■□□□□ 0.44
CCND2P1-201ENST00000539268 ZNF608Q9ULD9 1512 aaPredicted RBP17.73■□□□□ 0.43
CCND2P1-201ENST00000539268 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
CCND2P1-201ENST00000539268 RIMBP3CA6NJZ7 1639 aa17.66■□□□□ 0.42
CCND2P1-201ENST00000539268 RIMBP3BA6NNM3 1639 aa17.66■□□□□ 0.42
CCND2P1-201ENST00000539268 RIMBP3Q9UFD9 1639 aa17.66■□□□□ 0.42
CCND2P1-201ENST00000539268 PRDM2Q13029 1718 aa17.64■□□□□ 0.41
CCND2P1-201ENST00000539268 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
CCND2P1-201ENST00000539268 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
CCND2P1-201ENST00000539268 ARHGEF11O15085 1522 aa17.57■□□□□ 0.4
CCND2P1-201ENST00000539268 EIF4G3O43432 1585 aaKnown RBP17.55■□□□□ 0.4
CCND2P1-201ENST00000539268 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.39
CCND2P1-201ENST00000539268 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
CCND2P1-201ENST00000539268 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
CCND2P1-201ENST00000539268 CHD1O14646 1710 aa17.46■□□□□ 0.39
CCND2P1-201ENST00000539268 CYB5RLQ6IPT4 315 aa17.45■□□□□ 0.38
CCND2P1-201ENST00000539268 POLA1P09884 1462 aaPredicted RBP17.44■□□□□ 0.38
CCND2P1-201ENST00000539268 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
CCND2P1-201ENST00000539268 RAD54L2Q9Y4B4 1467 aa17.43■□□□□ 0.38
CCND2P1-201ENST00000539268 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
CCND2P1-201ENST00000539268 TDRD9Q8NDG6 1382 aaKnown RBP17.37■□□□□ 0.37
CCND2P1-201ENST00000539268 FBLN2P98095 1184 aa17.35■□□□□ 0.37
CCND2P1-201ENST00000539268 SOGA1O94964 1423 aa17.3■□□□□ 0.36
CCND2P1-201ENST00000539268 SNAPC4Q5SXM2 1469 aa17.29■□□□□ 0.36
CCND2P1-201ENST00000539268 FGD5Q6ZNL6 1462 aa17.29■□□□□ 0.36
CCND2P1-201ENST00000539268 CUX1P39880 1505 aa17.28■□□□□ 0.36
CCND2P1-201ENST00000539268 CLASP1Q7Z460 1538 aa17.27■□□□□ 0.36
CCND2P1-201ENST00000539268 TRHP20396 242 aaPredicted RBP17.26■□□□□ 0.35
CCND2P1-201ENST00000539268 WDR97A6NE52 1622 aa17.17■□□□□ 0.34
CCND2P1-201ENST00000539268 CHMP7Q8WUX9 453 aaPredicted RBP17.16■□□□□ 0.34
CCND2P1-201ENST00000539268 GRIN2BQ13224 1484 aa17.16■□□□□ 0.34
CCND2P1-201ENST00000539268 MAGI1Q96QZ7 1491 aaPredicted RBP17.16■□□□□ 0.34
CCND2P1-201ENST00000539268 SYNJ2O15056 1496 aa17.13■□□□□ 0.33
CCND2P1-201ENST00000539268 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
CCND2P1-201ENST00000539268 GAPVD1Q14C86 1478 aa17.09■□□□□ 0.33
CCND2P1-201ENST00000539268 ERCC6L2Q5T890 1561 aa17.09■□□□□ 0.33
CCND2P1-201ENST00000539268 PBRM1Q86U86 1689 aa17.09■□□□□ 0.33
CCND2P1-201ENST00000539268 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
CCND2P1-201ENST00000539268 ABCA10Q8WWZ4 1543 aa17.05■□□□□ 0.32
CCND2P1-201ENST00000539268 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
CCND2P1-201ENST00000539268 GRIN2AQ12879 1464 aa16.97■□□□□ 0.31
CCND2P1-201ENST00000539268 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
CCND2P1-201ENST00000539268 NUP160Q12769 1436 aa16.94■□□□□ 0.3
CCND2P1-201ENST00000539268 SUPT5HO00267 1087 aaKnown RBP16.93■□□□□ 0.3
CCND2P1-201ENST00000539268 WRNQ14191 1432 aaPredicted RBP eCLIP16.88■□□□□ 0.29
CCND2P1-201ENST00000539268 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
CCND2P1-201ENST00000539268 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
CCND2P1-201ENST00000539268 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
CCND2P1-201ENST00000539268 FHAD1B1AJZ9 1412 aa16.85■□□□□ 0.29
CCND2P1-201ENST00000539268 AEBP2Q6ZN18 517 aaPredicted RBP16.84■□□□□ 0.29
CCND2P1-201ENST00000539268 KIF13AQ9H1H9 1805 aa16.8■□□□□ 0.28
CCND2P1-201ENST00000539268 ERICH3Q5RHP9 1530 aa16.79■□□□□ 0.28
CCND2P1-201ENST00000539268 PRG4Q92954 1404 aaPredicted RBP16.78■□□□□ 0.28
CCND2P1-201ENST00000539268 JPH4Q96JJ6 628 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms