RNA–Protein interactions for RNA: ENST00000539260.1

SLC6A13-206, Transcript of solute carrier family 6 member 13, humanhuman

TSL 3

Gene SLC6A13, Length 607 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13-206ENST00000539260 NISCHQ9Y2I1 1504 aa17.5■□□□□ 0.39
SLC6A13-206ENST00000539260 CCDC180Q9P1Z9 1646 aa15.6■□□□□ 0.09
SLC6A13-206ENST00000539260 ABCC9O60706 1549 aa15.36■□□□□ 0.05
SLC6A13-206ENST00000539260 RB1CC1Q8TDY2 1594 aa14.68□□□□□ -0.06
SLC6A13-206ENST00000539260 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
SLC6A13-206ENST00000539260 NACADO15069 1562 aa14.62□□□□□ -0.07
SLC6A13-206ENST00000539260 ZCCHC6Q5VYS8 1495 aaKnown RBP14.61□□□□□ -0.07
SLC6A13-206ENST00000539260 MYO15BQ96JP2 1530 aa14.46□□□□□ -0.09
SLC6A13-206ENST00000539260 UNC13AQ9UPW8 1703 aa14.43□□□□□ -0.1
SLC6A13-206ENST00000539260 DCAF1Q9Y4B6 1507 aa14.41□□□□□ -0.1
SLC6A13-206ENST00000539260 SCRIBQ14160 1630 aa14.33□□□□□ -0.12
SLC6A13-206ENST00000539260 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
SLC6A13-206ENST00000539260 BICRAQ9NZM4 1560 aa14.28□□□□□ -0.12
SLC6A13-206ENST00000539260 DNAJC5BQ9UF47 199 aa14.07□□□□□ -0.16
SLC6A13-206ENST00000539260 SHROOM4Q9ULL8 1493 aa14.03□□□□□ -0.16
SLC6A13-206ENST00000539260 EIF4G1Q04637 1599 aaKnown RBP13.91□□□□□ -0.18
SLC6A13-206ENST00000539260 CC2D2AQ9P2K1 1620 aa13.87□□□□□ -0.19
SLC6A13-206ENST00000539260 CECR2Q9BXF3 1484 aa13.76□□□□□ -0.21
SLC6A13-206ENST00000539260 SMARCA4P51532 1647 aa13.64□□□□□ -0.23
SLC6A13-206ENST00000539260 BAZ1AQ9NRL2 1556 aaPredicted RBP13.57□□□□□ -0.24
SLC6A13-206ENST00000539260 ATAD2BQ9ULI0 1458 aa13.53□□□□□ -0.24
SLC6A13-206ENST00000539260 MROH2BQ7Z745 1585 aa13.53□□□□□ -0.24
SLC6A13-206ENST00000539260 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
SLC6A13-206ENST00000539260 NCAPD3P42695 1498 aa13.47□□□□□ -0.25
SLC6A13-206ENST00000539260 HMGXB3Q12766 1538 aa13.46□□□□□ -0.25
SLC6A13-206ENST00000539260 BAZ1BQ9UIG0 1483 aaKnown RBP13.44□□□□□ -0.26
SLC6A13-206ENST00000539260 PEG3Q9GZU2 1588 aa13.44□□□□□ -0.26
SLC6A13-206ENST00000539260 WIZO95785 1651 aa13.4□□□□□ -0.26
SLC6A13-206ENST00000539260 RSF1Q96T23 1441 aaPredicted RBP13.31□□□□□ -0.28
SLC6A13-206ENST00000539260 NESP48681 1621 aa13.28□□□□□ -0.28
SLC6A13-206ENST00000539260 TOP2AP11388 1531 aaKnown RBP13.23□□□□□ -0.29
SLC6A13-206ENST00000539260 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
SLC6A13-206ENST00000539260 LAMC3Q9Y6N6 1575 aa13.16□□□□□ -0.3
SLC6A13-206ENST00000539260 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.31
SLC6A13-206ENST00000539260 THOC2Q8NI27 1593 aaKnown RBP13.11□□□□□ -0.31
SLC6A13-206ENST00000539260 CADPSQ9ULU8 1353 aa13.08□□□□□ -0.31
SLC6A13-206ENST00000539260 CCDC88BA6NC98 1476 aa13.05□□□□□ -0.32
SLC6A13-206ENST00000539260 PDS5BQ9NTI5 1447 aa13.04□□□□□ -0.32
SLC6A13-206ENST00000539260 CUX2O14529 1486 aa13.04□□□□□ -0.32
SLC6A13-206ENST00000539260 CFTRP13569 1480 aa13.02□□□□□ -0.33
SLC6A13-206ENST00000539260 FANCD2Q9BXW9 1451 aa13□□□□□ -0.33
SLC6A13-206ENST00000539260 CEP164Q9UPV0 1460 aa12.99□□□□□ -0.33
SLC6A13-206ENST00000539260 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
SLC6A13-206ENST00000539260 MRC2Q9UBG0 1479 aa12.98□□□□□ -0.33
SLC6A13-206ENST00000539260 SUPT5HO00267 1087 aaKnown RBP12.98□□□□□ -0.33
SLC6A13-206ENST00000539260 WDR62O43379 1518 aa12.95□□□□□ -0.34
SLC6A13-206ENST00000539260 URB2Q14146 1524 aaKnown RBP12.89□□□□□ -0.35
SLC6A13-206ENST00000539260 TOPBP1Q92547 1522 aa12.79□□□□□ -0.36
SLC6A13-206ENST00000539260 DNMBPQ6XZF7 1577 aa12.77□□□□□ -0.36
SLC6A13-206ENST00000539260 CUX1P39880 1505 aa12.71□□□□□ -0.38
SLC6A13-206ENST00000539260 ZNF608Q9ULD9 1512 aaPredicted RBP12.7□□□□□ -0.38
SLC6A13-206ENST00000539260 POLA1P09884 1462 aaPredicted RBP12.69□□□□□ -0.38
SLC6A13-206ENST00000539260 IFT140Q96RY7 1462 aa12.69□□□□□ -0.38
SLC6A13-206ENST00000539260 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
SLC6A13-206ENST00000539260 EIF4G3O43432 1585 aaKnown RBP12.68□□□□□ -0.38
SLC6A13-206ENST00000539260 TARBP1Q13395 1621 aaKnown RBP12.66□□□□□ -0.38
SLC6A13-206ENST00000539260 FGD5Q6ZNL6 1462 aa12.66□□□□□ -0.38
SLC6A13-206ENST00000539260 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.38
SLC6A13-206ENST00000539260 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
SLC6A13-206ENST00000539260 SYNJ1O43426 1573 aa12.61□□□□□ -0.39
SLC6A13-206ENST00000539260 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.39
SLC6A13-206ENST00000539260 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
SLC6A13-206ENST00000539260 SOGA1O94964 1423 aa12.58□□□□□ -0.4
SLC6A13-206ENST00000539260 BIVM-ERCC5R4GMW8 1640 aa12.57□□□□□ -0.4
SLC6A13-206ENST00000539260 WRNQ14191 1432 aaPredicted RBP eCLIP12.56□□□□□ -0.4
SLC6A13-206ENST00000539260 TDRD9Q8NDG6 1382 aaKnown RBP12.56□□□□□ -0.4
SLC6A13-206ENST00000539260 TOP2BQ02880 1626 aa12.55□□□□□ -0.4
SLC6A13-206ENST00000539260 CHD1O14646 1710 aa12.53□□□□□ -0.4
SLC6A13-206ENST00000539260 SNAPC4Q5SXM2 1469 aa12.52□□□□□ -0.41
SLC6A13-206ENST00000539260 PBRM1Q86U86 1689 aa12.51□□□□□ -0.41
SLC6A13-206ENST00000539260 ABCA5Q8WWZ7 1642 aa12.51□□□□□ -0.41
SLC6A13-206ENST00000539260 ABCA10Q8WWZ4 1543 aa12.49□□□□□ -0.41
SLC6A13-206ENST00000539260 GRIN2BQ13224 1484 aa12.46□□□□□ -0.42
SLC6A13-206ENST00000539260 GAPVD1Q14C86 1478 aa12.46□□□□□ -0.42
SLC6A13-206ENST00000539260 FBLN2P98095 1184 aa12.44□□□□□ -0.42
SLC6A13-206ENST00000539260 MAGI1Q96QZ7 1491 aaPredicted RBP12.42□□□□□ -0.42
SLC6A13-206ENST00000539260 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
SLC6A13-206ENST00000539260 ADAMTS12P58397 1594 aa12.41□□□□□ -0.42
SLC6A13-206ENST00000539260 SYNJ2O15056 1496 aa12.39□□□□□ -0.43
SLC6A13-206ENST00000539260 RIMBP3CA6NJZ7 1639 aa12.37□□□□□ -0.43
SLC6A13-206ENST00000539260 RIMBP3BA6NNM3 1639 aa12.37□□□□□ -0.43
SLC6A13-206ENST00000539260 RIMBP3Q9UFD9 1639 aa12.37□□□□□ -0.43
SLC6A13-206ENST00000539260 CLASP1Q7Z460 1538 aa12.35□□□□□ -0.43
SLC6A13-206ENST00000539260 ARHGEF11O15085 1522 aa12.34□□□□□ -0.43
SLC6A13-206ENST00000539260 CHMP7Q8WUX9 453 aaPredicted RBP12.34□□□□□ -0.43
SLC6A13-206ENST00000539260 ERICH3Q5RHP9 1530 aa12.33□□□□□ -0.44
SLC6A13-206ENST00000539260 GRIN2AQ12879 1464 aa12.33□□□□□ -0.44
SLC6A13-206ENST00000539260 TRIM41Q8WV44 630 aa12.32□□□□□ -0.44
SLC6A13-206ENST00000539260 CEP170Q5SW79 1584 aa12.31□□□□□ -0.44
SLC6A13-206ENST00000539260 FHAD1B1AJZ9 1412 aa12.29□□□□□ -0.44
SLC6A13-206ENST00000539260 KIF27Q86VH2 1401 aa12.28□□□□□ -0.44
SLC6A13-206ENST00000539260 ARAP1Q96P48 1450 aa12.26□□□□□ -0.45
SLC6A13-206ENST00000539260 NUP160Q12769 1436 aa12.25□□□□□ -0.45
SLC6A13-206ENST00000539260 CUL7Q14999 1698 aa12.25□□□□□ -0.45
SLC6A13-206ENST00000539260 ERCC6L2Q5T890 1561 aa12.23□□□□□ -0.45
SLC6A13-206ENST00000539260 RUSC2Q8N2Y8 1516 aa12.23□□□□□ -0.45
SLC6A13-206ENST00000539260 IGF1RP08069 1367 aa12.2□□□□□ -0.46
SLC6A13-206ENST00000539260 SHROOM2Q13796 1616 aa12.19□□□□□ -0.46
SLC6A13-206ENST00000539260 CYB5RLQ6IPT4 315 aa12.17□□□□□ -0.46
SLC6A13-206ENST00000539260 CARMIL1Q5VZK9 1371 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms