RNA–Protein interactions for RNA: ENST00000539191.1

NPIPB4-210, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 305 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-210ENST00000539191 NISCHQ9Y2I1 1504 aa20.95■□□□□ 0.94
NPIPB4-210ENST00000539191 ABCC9O60706 1549 aa19.12■□□□□ 0.65
NPIPB4-210ENST00000539191 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
NPIPB4-210ENST00000539191 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
NPIPB4-210ENST00000539191 RB1CC1Q8TDY2 1594 aa17.98■□□□□ 0.47
NPIPB4-210ENST00000539191 DCAF8L2P0C7V8 631 aa17.88■□□□□ 0.45
NPIPB4-210ENST00000539191 PABPN1Q86U42 306 aaKnown RBP eCLIP17.8■□□□□ 0.44
NPIPB4-210ENST00000539191 UNC13AQ9UPW8 1703 aa17.8■□□□□ 0.44
NPIPB4-210ENST00000539191 NACADO15069 1562 aa17.78■□□□□ 0.44
NPIPB4-210ENST00000539191 BICRAQ9NZM4 1560 aa17.58■□□□□ 0.41
NPIPB4-210ENST00000539191 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
NPIPB4-210ENST00000539191 ZCCHC6Q5VYS8 1495 aaKnown RBP17.34■□□□□ 0.37
NPIPB4-210ENST00000539191 SCRIBQ14160 1630 aa17.33■□□□□ 0.37
NPIPB4-210ENST00000539191 CC2D2AQ9P2K1 1620 aa17.22■□□□□ 0.35
NPIPB4-210ENST00000539191 DCAF1Q9Y4B6 1507 aa17.16■□□□□ 0.34
NPIPB4-210ENST00000539191 CECR2Q9BXF3 1484 aa17.15■□□□□ 0.34
NPIPB4-210ENST00000539191 EIF4G1Q04637 1599 aaKnown RBP17.11■□□□□ 0.33
NPIPB4-210ENST00000539191 SHROOM4Q9ULL8 1493 aa17.02■□□□□ 0.32
NPIPB4-210ENST00000539191 DNAJC5Q9H3Z4 198 aa16.51■□□□□ 0.23
NPIPB4-210ENST00000539191 ERCC6Q03468 1493 aa16.43■□□□□ 0.22
NPIPB4-210ENST00000539191 ATAD2BQ9ULI0 1458 aa16.42■□□□□ 0.22
NPIPB4-210ENST00000539191 NESP48681 1621 aa16.42■□□□□ 0.22
NPIPB4-210ENST00000539191 SMARCA4P51532 1647 aa16.42■□□□□ 0.22
NPIPB4-210ENST00000539191 NCAPD3P42695 1498 aa16.41■□□□□ 0.22
NPIPB4-210ENST00000539191 CUX2O14529 1486 aa16.32■□□□□ 0.2
NPIPB4-210ENST00000539191 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
NPIPB4-210ENST00000539191 HMGXB3Q12766 1538 aa16.29■□□□□ 0.2
NPIPB4-210ENST00000539191 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.19
NPIPB4-210ENST00000539191 MROH2BQ7Z745 1585 aa16.24■□□□□ 0.19
NPIPB4-210ENST00000539191 BAZ1AQ9NRL2 1556 aaPredicted RBP16.23■□□□□ 0.19
NPIPB4-210ENST00000539191 KIF21AQ7Z4S6 1674 aa16.22■□□□□ 0.19
NPIPB4-210ENST00000539191 THOC2Q8NI27 1593 aaKnown RBP16.21■□□□□ 0.18
NPIPB4-210ENST00000539191 PEG3Q9GZU2 1588 aa16.15■□□□□ 0.18
NPIPB4-210ENST00000539191 WIZO95785 1651 aa16.1■□□□□ 0.17
NPIPB4-210ENST00000539191 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
NPIPB4-210ENST00000539191 PDS5BQ9NTI5 1447 aa15.96■□□□□ 0.15
NPIPB4-210ENST00000539191 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
NPIPB4-210ENST00000539191 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
NPIPB4-210ENST00000539191 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
NPIPB4-210ENST00000539191 WDR62O43379 1518 aa15.89■□□□□ 0.13
NPIPB4-210ENST00000539191 CEP164Q9UPV0 1460 aa15.83■□□□□ 0.12
NPIPB4-210ENST00000539191 FANCD2Q9BXW9 1451 aa15.82■□□□□ 0.12
NPIPB4-210ENST00000539191 RSF1Q96T23 1441 aaPredicted RBP15.78■□□□□ 0.12
NPIPB4-210ENST00000539191 URB2Q14146 1524 aaKnown RBP15.75■□□□□ 0.11
NPIPB4-210ENST00000539191 TOP2AP11388 1531 aaKnown RBP15.74■□□□□ 0.11
NPIPB4-210ENST00000539191 CFTRP13569 1480 aa15.73■□□□□ 0.11
NPIPB4-210ENST00000539191 PRDM2Q13029 1718 aa15.68■□□□□ 0.1
NPIPB4-210ENST00000539191 ZNF608Q9ULD9 1512 aaPredicted RBP15.62■□□□□ 0.09
NPIPB4-210ENST00000539191 CCDC88BA6NC98 1476 aa15.6■□□□□ 0.09
NPIPB4-210ENST00000539191 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
NPIPB4-210ENST00000539191 RIMBP3CA6NJZ7 1639 aa15.55■□□□□ 0.08
NPIPB4-210ENST00000539191 RIMBP3BA6NNM3 1639 aa15.55■□□□□ 0.08
NPIPB4-210ENST00000539191 RIMBP3Q9UFD9 1639 aa15.55■□□□□ 0.08
NPIPB4-210ENST00000539191 TOPBP1Q92547 1522 aa15.52■□□□□ 0.07
NPIPB4-210ENST00000539191 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
NPIPB4-210ENST00000539191 CHD1O14646 1710 aa15.48■□□□□ 0.07
NPIPB4-210ENST00000539191 IFT140Q96RY7 1462 aa15.46■□□□□ 0.06
NPIPB4-210ENST00000539191 ARHGEF11O15085 1522 aa15.44■□□□□ 0.06
NPIPB4-210ENST00000539191 AQRO60306 1485 aaKnown RBP eCLIP15.43■□□□□ 0.06
NPIPB4-210ENST00000539191 DNMBPQ6XZF7 1577 aa15.43■□□□□ 0.06
NPIPB4-210ENST00000539191 TARBP1Q13395 1621 aaKnown RBP15.42■□□□□ 0.06
NPIPB4-210ENST00000539191 RAD54L2Q9Y4B4 1467 aa15.38■□□□□ 0.05
NPIPB4-210ENST00000539191 FBLN2P98095 1184 aa15.36■□□□□ 0.05
NPIPB4-210ENST00000539191 POLA1P09884 1462 aaPredicted RBP15.35■□□□□ 0.05
NPIPB4-210ENST00000539191 CYB5RLQ6IPT4 315 aa15.35■□□□□ 0.05
NPIPB4-210ENST00000539191 TDRD9Q8NDG6 1382 aaKnown RBP15.31■□□□□ 0.04
NPIPB4-210ENST00000539191 ABCC8Q09428 1581 aa15.3■□□□□ 0.04
NPIPB4-210ENST00000539191 ARAP1Q96P48 1450 aa15.29■□□□□ 0.04
NPIPB4-210ENST00000539191 FGD5Q6ZNL6 1462 aa15.27■□□□□ 0.03
NPIPB4-210ENST00000539191 CUX1P39880 1505 aa15.25■□□□□ 0.03
NPIPB4-210ENST00000539191 SNAPC4Q5SXM2 1469 aa15.25■□□□□ 0.03
NPIPB4-210ENST00000539191 SOGA1O94964 1423 aa15.24■□□□□ 0.03
NPIPB4-210ENST00000539191 TRHP20396 242 aaPredicted RBP15.22■□□□□ 0.03
NPIPB4-210ENST00000539191 WDR97A6NE52 1622 aa15.19■□□□□ 0.02
NPIPB4-210ENST00000539191 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
NPIPB4-210ENST00000539191 CLASP1Q7Z460 1538 aa15.17■□□□□ 0.02
NPIPB4-210ENST00000539191 CHMP7Q8WUX9 453 aaPredicted RBP15.12■□□□□ 0.01
NPIPB4-210ENST00000539191 SUPT5HO00267 1087 aaKnown RBP15.11■□□□□ 0.01
NPIPB4-210ENST00000539191 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
NPIPB4-210ENST00000539191 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
NPIPB4-210ENST00000539191 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0.01
NPIPB4-210ENST00000539191 ERCC6L2Q5T890 1561 aa15.08■□□□□ 0
NPIPB4-210ENST00000539191 SYNJ2O15056 1496 aa15.07■□□□□ 0
NPIPB4-210ENST00000539191 ABCA5Q8WWZ7 1642 aa15.06■□□□□ 0
NPIPB4-210ENST00000539191 GAPVD1Q14C86 1478 aa15.06■□□□□ 0
NPIPB4-210ENST00000539191 ABCA10Q8WWZ4 1543 aa14.99□□□□□ -0.01
NPIPB4-210ENST00000539191 CEP170Q5SW79 1584 aa14.98□□□□□ -0.01
NPIPB4-210ENST00000539191 ADAMTS12P58397 1594 aa14.97□□□□□ -0.01
NPIPB4-210ENST00000539191 GRIN2AQ12879 1464 aa14.95□□□□□ -0.02
NPIPB4-210ENST00000539191 BIVM-ERCC5R4GMW8 1640 aa14.93□□□□□ -0.02
NPIPB4-210ENST00000539191 TOP2BQ02880 1626 aa14.91□□□□□ -0.02
NPIPB4-210ENST00000539191 WRNQ14191 1432 aaPredicted RBP eCLIP14.89□□□□□ -0.03
NPIPB4-210ENST00000539191 NUP160Q12769 1436 aa14.86□□□□□ -0.03
NPIPB4-210ENST00000539191 SHROOM2Q13796 1616 aa14.86□□□□□ -0.03
NPIPB4-210ENST00000539191 KIF13AQ9H1H9 1805 aa14.85□□□□□ -0.03
NPIPB4-210ENST00000539191 FHAD1B1AJZ9 1412 aa14.81□□□□□ -0.04
NPIPB4-210ENST00000539191 AEBP2Q6ZN18 517 aaPredicted RBP14.8□□□□□ -0.04
NPIPB4-210ENST00000539191 ERICH3Q5RHP9 1530 aa14.78□□□□□ -0.04
NPIPB4-210ENST00000539191 PRG4Q92954 1404 aaPredicted RBP14.78□□□□□ -0.04
NPIPB4-210ENST00000539191 RUSC2Q8N2Y8 1516 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms