RNA–Protein interactions for RNA: ENST00000539171.1

CCDC62-206, Transcript of coiled-coil domain containing 62, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC62, Length 331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62-206ENST00000539171 NISCHQ9Y2I1 1504 aa55.96■■■■■ 6.55
CCDC62-206ENST00000539171 CCDC180Q9P1Z9 1646 aa50.08■■■■■ 5.61
CCDC62-206ENST00000539171 ABCC9O60706 1549 aa50.06■■■■■ 5.6
CCDC62-206ENST00000539171 RB1CC1Q8TDY2 1594 aa47.69■■■■■ 5.22
CCDC62-206ENST00000539171 NACADO15069 1562 aa47.41■■■■■ 5.18
CCDC62-206ENST00000539171 DCAF8L2P0C7V8 631 aa47.26■■■■■ 5.16
CCDC62-206ENST00000539171 DNAJC5BQ9UF47 199 aa46.94■■■■■ 5.1
CCDC62-206ENST00000539171 MYO15BQ96JP2 1530 aa46.84■■■■■ 5.09
CCDC62-206ENST00000539171 PABPN1Q86U42 306 aaKnown RBP eCLIP46.68■■■■■ 5.06
CCDC62-206ENST00000539171 UNC13AQ9UPW8 1703 aa46.46■■■■■ 5.03
CCDC62-206ENST00000539171 ZCCHC6Q5VYS8 1495 aaKnown RBP46.38■■■■■ 5.01
CCDC62-206ENST00000539171 BICRAQ9NZM4 1560 aa46.26■■■■■ 5
CCDC62-206ENST00000539171 DCAF1Q9Y4B6 1507 aa46.25■■■■■ 4.99
CCDC62-206ENST00000539171 SHROOM4Q9ULL8 1493 aa45.74■■■■■ 4.91
CCDC62-206ENST00000539171 SCRIBQ14160 1630 aa45.64■■■■■ 4.9
CCDC62-206ENST00000539171 CC2D2AQ9P2K1 1620 aa45.19■■■■■ 4.83
CCDC62-206ENST00000539171 EIF4G1Q04637 1599 aaKnown RBP45.14■■■■■ 4.82
CCDC62-206ENST00000539171 CECR2Q9BXF3 1484 aa45.11■■■■■ 4.81
CCDC62-206ENST00000539171 NCAPD3P42695 1498 aa43.82■■■■■ 4.6
CCDC62-206ENST00000539171 ATAD2BQ9ULI0 1458 aa43.67■■■■■ 4.58
CCDC62-206ENST00000539171 SMARCA4P51532 1647 aa43.57■■■■■ 4.57
CCDC62-206ENST00000539171 SMARCA2P51531 1590 aa43.53■■■■■ 4.56
CCDC62-206ENST00000539171 HMGXB3Q12766 1538 aa43.43■■■■■ 4.54
CCDC62-206ENST00000539171 BAZ1AQ9NRL2 1556 aaPredicted RBP43.41■■■■■ 4.54
CCDC62-206ENST00000539171 ERCC6Q03468 1493 aa43.24■■■■■ 4.51
CCDC62-206ENST00000539171 BAZ1BQ9UIG0 1483 aaKnown RBP43.23■■■■■ 4.51
CCDC62-206ENST00000539171 PEG3Q9GZU2 1588 aa43.2■■■■■ 4.51
CCDC62-206ENST00000539171 CUX2O14529 1486 aa43.14■■■■■ 4.5
CCDC62-206ENST00000539171 MROH2BQ7Z745 1585 aa43.09■■■■■ 4.49
CCDC62-206ENST00000539171 DNAJC5Q9H3Z4 198 aa43.08■■■■■ 4.49
CCDC62-206ENST00000539171 NESP48681 1621 aa43.01■■■■■ 4.48
CCDC62-206ENST00000539171 LAMC3Q9Y6N6 1575 aa42.74■■■■■ 4.43
CCDC62-206ENST00000539171 PDS5BQ9NTI5 1447 aa42.57■■■■■ 4.41
CCDC62-206ENST00000539171 WIZO95785 1651 aa42.52■■■■■ 4.4
CCDC62-206ENST00000539171 THOC2Q8NI27 1593 aaKnown RBP42.52■■■■■ 4.4
CCDC62-206ENST00000539171 CADPSQ9ULU8 1353 aa42.51■■■■■ 4.4
CCDC62-206ENST00000539171 KIF21AQ7Z4S6 1674 aa42.38■■■■■ 4.37
CCDC62-206ENST00000539171 RSF1Q96T23 1441 aaPredicted RBP42.29■■■■■ 4.36
CCDC62-206ENST00000539171 MRC2Q9UBG0 1479 aa42.14■■■■■ 4.34
CCDC62-206ENST00000539171 TOP2AP11388 1531 aaKnown RBP42.05■■■■■ 4.32
CCDC62-206ENST00000539171 WDR62O43379 1518 aa42.01■■■■■ 4.32
CCDC62-206ENST00000539171 CFTRP13569 1480 aa42.01■■■■■ 4.32
CCDC62-206ENST00000539171 CEP164Q9UPV0 1460 aa41.99■■■■■ 4.31
CCDC62-206ENST00000539171 FANCD2Q9BXW9 1451 aa41.97■■■■■ 4.31
CCDC62-206ENST00000539171 CCDC88BA6NC98 1476 aa41.61■■■■■ 4.25
CCDC62-206ENST00000539171 URB2Q14146 1524 aaKnown RBP41.59■■■■■ 4.25
CCDC62-206ENST00000539171 PRDM2Q13029 1718 aa41.41■■■■■ 4.22
CCDC62-206ENST00000539171 OSCARQ8IYS5 282 aa41.27■■■■■ 4.2
CCDC62-206ENST00000539171 IFT140Q96RY7 1462 aa41.18■■■■■ 4.18
CCDC62-206ENST00000539171 TRIM41Q8WV44 630 aa41.18■■■■■ 4.18
CCDC62-206ENST00000539171 TOPBP1Q92547 1522 aa41.17■■■■■ 4.18
CCDC62-206ENST00000539171 ABCC8Q09428 1581 aa41.15■■■■■ 4.18
CCDC62-206ENST00000539171 ZNF608Q9ULD9 1512 aaPredicted RBP41.07■■■■■ 4.16
CCDC62-206ENST00000539171 DNMBPQ6XZF7 1577 aa41■■■■■ 4.15
CCDC62-206ENST00000539171 EIF4G3O43432 1585 aaKnown RBP40.78■■■■■ 4.12
CCDC62-206ENST00000539171 TARBP1Q13395 1621 aaKnown RBP40.76■■■■■ 4.12
CCDC62-206ENST00000539171 POLA1P09884 1462 aaPredicted RBP40.76■■■■■ 4.12
CCDC62-206ENST00000539171 AQRO60306 1485 aaKnown RBP eCLIP40.74■■■■■ 4.11
CCDC62-206ENST00000539171 SOGA1O94964 1423 aa40.63■■■■■ 4.09
CCDC62-206ENST00000539171 RAD54L2Q9Y4B4 1467 aa40.61■■■■■ 4.09
CCDC62-206ENST00000539171 RIMBP3CA6NJZ7 1639 aa40.56■■■■■ 4.08
CCDC62-206ENST00000539171 RIMBP3BA6NNM3 1639 aa40.56■■■■■ 4.08
CCDC62-206ENST00000539171 RIMBP3Q9UFD9 1639 aa40.56■■■■■ 4.08
CCDC62-206ENST00000539171 TDRD9Q8NDG6 1382 aaKnown RBP40.52■■■■■ 4.08
CCDC62-206ENST00000539171 FGD5Q6ZNL6 1462 aa40.51■■■■■ 4.07
CCDC62-206ENST00000539171 SUPT5HO00267 1087 aaKnown RBP40.5■■■■■ 4.07
CCDC62-206ENST00000539171 ARHGEF11O15085 1522 aa40.49■■■■■ 4.07
CCDC62-206ENST00000539171 FBLN2P98095 1184 aa40.49■■■■■ 4.07
CCDC62-206ENST00000539171 CUX1P39880 1505 aa40.48■■■■■ 4.07
CCDC62-206ENST00000539171 CHD1O14646 1710 aa40.41■■■■■ 4.06
CCDC62-206ENST00000539171 WDR97A6NE52 1622 aa40.38■■■■■ 4.06
CCDC62-206ENST00000539171 SNAPC4Q5SXM2 1469 aa40.29■■■■■ 4.04
CCDC62-206ENST00000539171 CYB5RLQ6IPT4 315 aa40.27■■■■■ 4.04
CCDC62-206ENST00000539171 GRIN2BQ13224 1484 aa40.24■■■■■ 4.03
CCDC62-206ENST00000539171 CHMP7Q8WUX9 453 aaPredicted RBP40.23■■■■■ 4.03
CCDC62-206ENST00000539171 MAGI1Q96QZ7 1491 aaPredicted RBP40.22■■■■■ 4.03
CCDC62-206ENST00000539171 GAPVD1Q14C86 1478 aa40.11■■■■■ 4.01
CCDC62-206ENST00000539171 ARAP1Q96P48 1450 aa40.1■■■■■ 4.01
CCDC62-206ENST00000539171 SYNJ2O15056 1496 aa40.09■■■■■ 4.01
CCDC62-206ENST00000539171 ABCA10Q8WWZ4 1543 aa40.08■■■■■ 4.01
CCDC62-206ENST00000539171 CLASP1Q7Z460 1538 aa40.04■■■■■ 4
CCDC62-206ENST00000539171 SYNJ1O43426 1573 aa40.04■■■■■ 4
CCDC62-206ENST00000539171 WRNQ14191 1432 aaPredicted RBP eCLIP39.98■■■■□ 3.99
CCDC62-206ENST00000539171 PBRM1Q86U86 1689 aa39.94■■■■□ 3.98
CCDC62-206ENST00000539171 ABCA5Q8WWZ7 1642 aa39.94■■■■□ 3.98
CCDC62-206ENST00000539171 TOP2BQ02880 1626 aa39.84■■■■□ 3.97
CCDC62-206ENST00000539171 BIVM-ERCC5R4GMW8 1640 aa39.81■■■■□ 3.96
CCDC62-206ENST00000539171 TRHP20396 242 aaPredicted RBP39.78■■■■□ 3.96
CCDC62-206ENST00000539171 GRIN2AQ12879 1464 aa39.7■■■■□ 3.95
CCDC62-206ENST00000539171 ADAMTS12P58397 1594 aa39.63■■■■□ 3.94
CCDC62-206ENST00000539171 FHAD1B1AJZ9 1412 aa39.62■■■■□ 3.93
CCDC62-206ENST00000539171 NUP160Q12769 1436 aa39.59■■■■□ 3.93
CCDC62-206ENST00000539171 ERICH3Q5RHP9 1530 aa39.57■■■■□ 3.93
CCDC62-206ENST00000539171 CEP170Q5SW79 1584 aa39.5■■■■□ 3.91
CCDC62-206ENST00000539171 ERCC6L2Q5T890 1561 aa39.4■■■■□ 3.9
CCDC62-206ENST00000539171 SHROOM2Q13796 1616 aa39.32■■■■□ 3.89
CCDC62-206ENST00000539171 JPH4Q96JJ6 628 aa39.25■■■■□ 3.87
CCDC62-206ENST00000539171 PRG4Q92954 1404 aaPredicted RBP39.21■■■■□ 3.87
CCDC62-206ENST00000539171 IGF1RP08069 1367 aa39.16■■■■□ 3.86
CCDC62-206ENST00000539171 KIF27Q86VH2 1401 aa39.15■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms