RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.42
CLPB-210ENST00000539148 CCDC180Q9P1Z9 1646 aa21.21■□□□□ 0.99
CLPB-210ENST00000539148 ABCC9O60706 1549 aa20.21■□□□□ 0.83
CLPB-210ENST00000539148 ZCCHC6Q5VYS8 1495 aaKnown RBP19.97■□□□□ 0.79
CLPB-210ENST00000539148 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
CLPB-210ENST00000539148 MYO15BQ96JP2 1530 aa19.83■□□□□ 0.77
CLPB-210ENST00000539148 DCAF8L2P0C7V8 631 aa19.82■□□□□ 0.76
CLPB-210ENST00000539148 NACADO15069 1562 aa19.82■□□□□ 0.76
CLPB-210ENST00000539148 RB1CC1Q8TDY2 1594 aa19.76■□□□□ 0.75
CLPB-210ENST00000539148 UNC13AQ9UPW8 1703 aa19.25■□□□□ 0.67
CLPB-210ENST00000539148 SCRIBQ14160 1630 aa19.25■□□□□ 0.67
CLPB-210ENST00000539148 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
CLPB-210ENST00000539148 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
CLPB-210ENST00000539148 DNAJC5BQ9UF47 199 aa18.91■□□□□ 0.62
CLPB-210ENST00000539148 PABPN1Q86U42 306 aaKnown RBP eCLIP18.89■□□□□ 0.61
CLPB-210ENST00000539148 BAZ1AQ9NRL2 1556 aaPredicted RBP18.57■□□□□ 0.56
CLPB-210ENST00000539148 EIF4G1Q04637 1599 aaKnown RBP18.52■□□□□ 0.56
CLPB-210ENST00000539148 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
CLPB-210ENST00000539148 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.55
CLPB-210ENST00000539148 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
CLPB-210ENST00000539148 MROH2BQ7Z745 1585 aa18.36■□□□□ 0.53
CLPB-210ENST00000539148 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
CLPB-210ENST00000539148 PEG3Q9GZU2 1588 aa18.31■□□□□ 0.52
CLPB-210ENST00000539148 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
CLPB-210ENST00000539148 ATAD2BQ9ULI0 1458 aa18.24■□□□□ 0.51
CLPB-210ENST00000539148 WIZO95785 1651 aa18.22■□□□□ 0.51
CLPB-210ENST00000539148 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
CLPB-210ENST00000539148 HMGXB3Q12766 1538 aa18.2■□□□□ 0.5
CLPB-210ENST00000539148 BAZ1BQ9UIG0 1483 aaKnown RBP18.19■□□□□ 0.5
CLPB-210ENST00000539148 SUPT5HO00267 1087 aaKnown RBP18.14■□□□□ 0.49
CLPB-210ENST00000539148 TOP2AP11388 1531 aaKnown RBP18.1■□□□□ 0.49
CLPB-210ENST00000539148 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
CLPB-210ENST00000539148 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
CLPB-210ENST00000539148 PRDM2Q13029 1718 aa17.72■□□□□ 0.43
CLPB-210ENST00000539148 CADPSQ9ULU8 1353 aa17.7■□□□□ 0.42
CLPB-210ENST00000539148 CFTRP13569 1480 aa17.66■□□□□ 0.42
CLPB-210ENST00000539148 PDS5BQ9NTI5 1447 aa17.61■□□□□ 0.41
CLPB-210ENST00000539148 NESP48681 1621 aa17.55■□□□□ 0.4
CLPB-210ENST00000539148 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
CLPB-210ENST00000539148 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
CLPB-210ENST00000539148 CEP164Q9UPV0 1460 aa17.49■□□□□ 0.39
CLPB-210ENST00000539148 DNAJC5Q9H3Z4 198 aa17.48■□□□□ 0.39
CLPB-210ENST00000539148 KIF21AQ7Z4S6 1674 aa17.47■□□□□ 0.39
CLPB-210ENST00000539148 ABCC8Q09428 1581 aa17.42■□□□□ 0.38
CLPB-210ENST00000539148 CUX2O14529 1486 aa17.38■□□□□ 0.37
CLPB-210ENST00000539148 MRC2Q9UBG0 1479 aa17.35■□□□□ 0.37
CLPB-210ENST00000539148 WRNQ14191 1432 aaPredicted RBP eCLIP17.31■□□□□ 0.36
CLPB-210ENST00000539148 DNMBPQ6XZF7 1577 aa17.31■□□□□ 0.36
CLPB-210ENST00000539148 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
CLPB-210ENST00000539148 BIVM-ERCC5R4GMW8 1640 aa17.27■□□□□ 0.36
CLPB-210ENST00000539148 WDR62O43379 1518 aa17.26■□□□□ 0.35
CLPB-210ENST00000539148 TOP2BQ02880 1626 aa17.25■□□□□ 0.35
CLPB-210ENST00000539148 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
CLPB-210ENST00000539148 URB2Q14146 1524 aaKnown RBP17.24■□□□□ 0.35
CLPB-210ENST00000539148 CUX1P39880 1505 aa17.21■□□□□ 0.35
CLPB-210ENST00000539148 TRIM41Q8WV44 630 aa17.2■□□□□ 0.34
CLPB-210ENST00000539148 SYNJ1O43426 1573 aa17.19■□□□□ 0.34
CLPB-210ENST00000539148 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
CLPB-210ENST00000539148 CHIC1Q5VXU3 224 aa17.13■□□□□ 0.33
CLPB-210ENST00000539148 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
CLPB-210ENST00000539148 IFT140Q96RY7 1462 aa17.1■□□□□ 0.33
CLPB-210ENST00000539148 SOGA1O94964 1423 aa17.08■□□□□ 0.32
CLPB-210ENST00000539148 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
CLPB-210ENST00000539148 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
CLPB-210ENST00000539148 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
CLPB-210ENST00000539148 KIF27Q86VH2 1401 aa16.97■□□□□ 0.31
CLPB-210ENST00000539148 RAD54L2Q9Y4B4 1467 aa16.97■□□□□ 0.31
CLPB-210ENST00000539148 EEA1Q15075 1411 aa16.96■□□□□ 0.31
CLPB-210ENST00000539148 ABCA5Q8WWZ7 1642 aa16.91■□□□□ 0.3
CLPB-210ENST00000539148 GAPVD1Q14C86 1478 aa16.91■□□□□ 0.3
CLPB-210ENST00000539148 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
CLPB-210ENST00000539148 PBRM1Q86U86 1689 aa16.89■□□□□ 0.29
CLPB-210ENST00000539148 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
CLPB-210ENST00000539148 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
CLPB-210ENST00000539148 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
CLPB-210ENST00000539148 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
CLPB-210ENST00000539148 CUL7Q14999 1698 aa16.84■□□□□ 0.29
CLPB-210ENST00000539148 AQRO60306 1485 aaKnown RBP eCLIP16.83■□□□□ 0.28
CLPB-210ENST00000539148 MAGI1Q96QZ7 1491 aaPredicted RBP16.81■□□□□ 0.28
CLPB-210ENST00000539148 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
CLPB-210ENST00000539148 IGF1RP08069 1367 aa16.75■□□□□ 0.27
CLPB-210ENST00000539148 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
CLPB-210ENST00000539148 RUSC2Q8N2Y8 1516 aa16.74■□□□□ 0.27
CLPB-210ENST00000539148 FAM9AQ8IZU1 332 aaPredicted RBP16.73■□□□□ 0.27
CLPB-210ENST00000539148 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
CLPB-210ENST00000539148 ADAMTS12P58397 1594 aa16.72■□□□□ 0.27
CLPB-210ENST00000539148 CARMIL1Q5VZK9 1371 aa16.71■□□□□ 0.27
CLPB-210ENST00000539148 SYNJ2O15056 1496 aa16.71■□□□□ 0.27
CLPB-210ENST00000539148 KIF21BO75037 1637 aa16.7■□□□□ 0.26
CLPB-210ENST00000539148 CHMP7Q8WUX9 453 aaPredicted RBP16.69■□□□□ 0.26
CLPB-210ENST00000539148 RAPGEF2Q9Y4G8 1499 aa16.68■□□□□ 0.26
CLPB-210ENST00000539148 PRXQ9BXM0 1461 aa16.66■□□□□ 0.26
CLPB-210ENST00000539148 CHD1O14646 1710 aa16.65■□□□□ 0.26
CLPB-210ENST00000539148 FBLN2P98095 1184 aa16.64■□□□□ 0.25
CLPB-210ENST00000539148 GOLGA3Q08378 1498 aa16.62■□□□□ 0.25
CLPB-210ENST00000539148 GRIN2AQ12879 1464 aa16.62■□□□□ 0.25
CLPB-210ENST00000539148 CTTNBP2Q8WZ74 1663 aa16.59■□□□□ 0.25
CLPB-210ENST00000539148 UBTFP17480 764 aaKnown RBP16.55■□□□□ 0.24
CLPB-210ENST00000539148 OSCARQ8IYS5 282 aa16.54■□□□□ 0.24
CLPB-210ENST00000539148 NUP160Q12769 1436 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms