RNA–Protein interactions for RNA: ENST00000539067.5

CRX-202, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRX, Length 2,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-202ENST00000539067 NISCHQ9Y2I1 1504 aa27.81■■■□□ 2.04
CRX-202ENST00000539067 CCDC180Q9P1Z9 1646 aa24.49■■□□□ 1.51
CRX-202ENST00000539067 ABCC9O60706 1549 aa23.92■■□□□ 1.42
CRX-202ENST00000539067 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
CRX-202ENST00000539067 ZCCHC6Q5VYS8 1495 aaKnown RBP23.21■■□□□ 1.31
CRX-202ENST00000539067 NACADO15069 1562 aa22.98■■□□□ 1.27
CRX-202ENST00000539067 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
CRX-202ENST00000539067 DCAF1Q9Y4B6 1507 aa22.89■■□□□ 1.26
CRX-202ENST00000539067 MYO15BQ96JP2 1530 aa22.85■■□□□ 1.25
CRX-202ENST00000539067 SCRIBQ14160 1630 aa22.56■■□□□ 1.2
CRX-202ENST00000539067 UNC13AQ9UPW8 1703 aa22.53■■□□□ 1.2
CRX-202ENST00000539067 PABPN1Q86U42 306 aaKnown RBP eCLIP22.47■■□□□ 1.19
CRX-202ENST00000539067 SHROOM4Q9ULL8 1493 aa22.38■■□□□ 1.17
CRX-202ENST00000539067 BICRAQ9NZM4 1560 aa22.33■■□□□ 1.17
CRX-202ENST00000539067 DNAJC5BQ9UF47 199 aa21.77■■□□□ 1.08
CRX-202ENST00000539067 CECR2Q9BXF3 1484 aa21.74■■□□□ 1.07
CRX-202ENST00000539067 EIF4G1Q04637 1599 aaKnown RBP21.71■■□□□ 1.07
CRX-202ENST00000539067 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.04
CRX-202ENST00000539067 SUPT5HO00267 1087 aaKnown RBP21.57■■□□□ 1.04
CRX-202ENST00000539067 SMARCA4P51532 1647 aa21.52■■□□□ 1.04
CRX-202ENST00000539067 MROH2BQ7Z745 1585 aa21.5■■□□□ 1.03
CRX-202ENST00000539067 BAZ1AQ9NRL2 1556 aaPredicted RBP21.5■■□□□ 1.03
CRX-202ENST00000539067 ATAD2BQ9ULI0 1458 aa21.34■■□□□ 1.01
CRX-202ENST00000539067 RSF1Q96T23 1441 aaPredicted RBP21.34■■□□□ 1.01
CRX-202ENST00000539067 WIZO95785 1651 aa21.3■■□□□ 1
CRX-202ENST00000539067 SMARCA2P51531 1590 aa21.26■□□□□ 0.99
CRX-202ENST00000539067 NCAPD3P42695 1498 aa21.24■□□□□ 0.99
CRX-202ENST00000539067 PEG3Q9GZU2 1588 aa21.22■□□□□ 0.99
CRX-202ENST00000539067 BAZ1BQ9UIG0 1483 aaKnown RBP21.19■□□□□ 0.98
CRX-202ENST00000539067 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
CRX-202ENST00000539067 TOP2AP11388 1531 aaKnown RBP21■□□□□ 0.95
CRX-202ENST00000539067 CCDC88BA6NC98 1476 aa20.82■□□□□ 0.92
CRX-202ENST00000539067 NESP48681 1621 aa20.8■□□□□ 0.92
CRX-202ENST00000539067 CHIC1Q5VXU3 224 aa20.69■□□□□ 0.9
CRX-202ENST00000539067 CADPSQ9ULU8 1353 aa20.68■□□□□ 0.9
CRX-202ENST00000539067 LAMC3Q9Y6N6 1575 aa20.61■□□□□ 0.89
CRX-202ENST00000539067 CFTRP13569 1480 aa20.59■□□□□ 0.89
CRX-202ENST00000539067 ERCC6Q03468 1493 aa20.54■□□□□ 0.88
CRX-202ENST00000539067 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
CRX-202ENST00000539067 KIF21AQ7Z4S6 1674 aa20.49■□□□□ 0.87
CRX-202ENST00000539067 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
CRX-202ENST00000539067 PRDM2Q13029 1718 aa20.41■□□□□ 0.86
CRX-202ENST00000539067 CEP164Q9UPV0 1460 aa20.39■□□□□ 0.85
CRX-202ENST00000539067 THOC2Q8NI27 1593 aaKnown RBP20.3■□□□□ 0.84
CRX-202ENST00000539067 MRC2Q9UBG0 1479 aa20.28■□□□□ 0.84
CRX-202ENST00000539067 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
CRX-202ENST00000539067 URB2Q14146 1524 aaKnown RBP20.26■□□□□ 0.83
CRX-202ENST00000539067 ABCC8Q09428 1581 aa20.22■□□□□ 0.83
CRX-202ENST00000539067 WDR62O43379 1518 aa20.19■□□□□ 0.82
CRX-202ENST00000539067 TOPBP1Q92547 1522 aa20.16■□□□□ 0.82
CRX-202ENST00000539067 CUX1P39880 1505 aa20.14■□□□□ 0.82
CRX-202ENST00000539067 DNMBPQ6XZF7 1577 aa20.12■□□□□ 0.81
CRX-202ENST00000539067 CUX2O14529 1486 aa20.1■□□□□ 0.81
CRX-202ENST00000539067 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
CRX-202ENST00000539067 SYNJ1O43426 1573 aa20.07■□□□□ 0.8
CRX-202ENST00000539067 FGD5Q6ZNL6 1462 aa20.03■□□□□ 0.8
CRX-202ENST00000539067 POLA1P09884 1462 aaPredicted RBP20.02■□□□□ 0.8
CRX-202ENST00000539067 RAD54L2Q9Y4B4 1467 aa20■□□□□ 0.79
CRX-202ENST00000539067 TOP2BQ02880 1626 aa19.99■□□□□ 0.79
CRX-202ENST00000539067 BIVM-ERCC5R4GMW8 1640 aa19.96■□□□□ 0.79
CRX-202ENST00000539067 SOGA1O94964 1423 aa19.95■□□□□ 0.78
CRX-202ENST00000539067 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
CRX-202ENST00000539067 IFT140Q96RY7 1462 aa19.92■□□□□ 0.78
CRX-202ENST00000539067 TARBP1Q13395 1621 aaKnown RBP19.9■□□□□ 0.78
CRX-202ENST00000539067 FAM9AQ8IZU1 332 aaPredicted RBP19.9■□□□□ 0.78
CRX-202ENST00000539067 LOC105371045A0A1W2PR82 267 aa19.88■□□□□ 0.77
CRX-202ENST00000539067 TDRD9Q8NDG6 1382 aaKnown RBP19.88■□□□□ 0.77
CRX-202ENST00000539067 AQRO60306 1485 aaKnown RBP eCLIP19.86■□□□□ 0.77
CRX-202ENST00000539067 EEA1Q15075 1411 aa19.8■□□□□ 0.76
CRX-202ENST00000539067 EIF4G3O43432 1585 aaKnown RBP19.79■□□□□ 0.76
CRX-202ENST00000539067 ABCA10Q8WWZ4 1543 aa19.78■□□□□ 0.76
CRX-202ENST00000539067 WDR97A6NE52 1622 aa19.78■□□□□ 0.76
CRX-202ENST00000539067 GAPVD1Q14C86 1478 aa19.71■□□□□ 0.75
CRX-202ENST00000539067 RUSC2Q8N2Y8 1516 aa19.69■□□□□ 0.74
CRX-202ENST00000539067 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
CRX-202ENST00000539067 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.73
CRX-202ENST00000539067 GRIN2BQ13224 1484 aa19.63■□□□□ 0.73
CRX-202ENST00000539067 PBRM1Q86U86 1689 aa19.63■□□□□ 0.73
CRX-202ENST00000539067 KIF27Q86VH2 1401 aa19.63■□□□□ 0.73
CRX-202ENST00000539067 SNAPC4Q5SXM2 1469 aa19.63■□□□□ 0.73
CRX-202ENST00000539067 FBLN2P98095 1184 aa19.63■□□□□ 0.73
CRX-202ENST00000539067 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
CRX-202ENST00000539067 IGF1RP08069 1367 aa19.57■□□□□ 0.72
CRX-202ENST00000539067 KIF21BO75037 1637 aa19.55■□□□□ 0.72
CRX-202ENST00000539067 GOLGA3Q08378 1498 aa19.53■□□□□ 0.72
CRX-202ENST00000539067 ERICH3Q5RHP9 1530 aa19.53■□□□□ 0.72
CRX-202ENST00000539067 CHMP7Q8WUX9 453 aaPredicted RBP19.53■□□□□ 0.72
CRX-202ENST00000539067 MAGI1Q96QZ7 1491 aaPredicted RBP19.52■□□□□ 0.72
CRX-202ENST00000539067 CHD1O14646 1710 aa19.5■□□□□ 0.71
CRX-202ENST00000539067 ADAMTS12P58397 1594 aa19.49■□□□□ 0.71
CRX-202ENST00000539067 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
CRX-202ENST00000539067 DNAJC5Q9H3Z4 198 aa19.47■□□□□ 0.71
CRX-202ENST00000539067 TNIKQ9UKE5 1360 aa19.47■□□□□ 0.71
CRX-202ENST00000539067 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
CRX-202ENST00000539067 CARMIL1Q5VZK9 1371 aa19.45■□□□□ 0.7
CRX-202ENST00000539067 OSCARQ8IYS5 282 aa19.43■□□□□ 0.7
CRX-202ENST00000539067 UBTFP17480 764 aaKnown RBP19.41■□□□□ 0.7
CRX-202ENST00000539067 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
CRX-202ENST00000539067 CUL7Q14999 1698 aa19.4■□□□□ 0.7
CRX-202ENST00000539067 PRXQ9BXM0 1461 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms