RNA–Protein interactions for RNA: ENST00000539029.5

PTPN6-212, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 705 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-212ENST00000539029 NISCHQ9Y2I1 1504 aa24.99■■□□□ 1.59
PTPN6-212ENST00000539029 ABCC9O60706 1549 aa24.51■■□□□ 1.51
PTPN6-212ENST00000539029 DNAJC5BQ9UF47 199 aa24.31■■□□□ 1.48
PTPN6-212ENST00000539029 DNAJC5Q9H3Z4 198 aa23.45■■□□□ 1.34
PTPN6-212ENST00000539029 CCDC180Q9P1Z9 1646 aa23.1■■□□□ 1.29
PTPN6-212ENST00000539029 RB1CC1Q8TDY2 1594 aa22.7■■□□□ 1.22
PTPN6-212ENST00000539029 PABPN1Q86U42 306 aaKnown RBP eCLIP22.57■■□□□ 1.2
PTPN6-212ENST00000539029 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
PTPN6-212ENST00000539029 UNC13AQ9UPW8 1703 aa22.2■■□□□ 1.14
PTPN6-212ENST00000539029 NACADO15069 1562 aa22.18■■□□□ 1.14
PTPN6-212ENST00000539029 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
PTPN6-212ENST00000539029 CC2D2AQ9P2K1 1620 aa22.08■■□□□ 1.13
PTPN6-212ENST00000539029 TRIM41Q8WV44 630 aa21.77■■□□□ 1.08
PTPN6-212ENST00000539029 CUX2O14529 1486 aa21.77■■□□□ 1.07
PTPN6-212ENST00000539029 DCAF8L2P0C7V8 631 aa21.72■■□□□ 1.07
PTPN6-212ENST00000539029 EIF4G1Q04637 1599 aaKnown RBP21.66■■□□□ 1.06
PTPN6-212ENST00000539029 SHROOM4Q9ULL8 1493 aa21.66■■□□□ 1.06
PTPN6-212ENST00000539029 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.02
PTPN6-212ENST00000539029 ERCC6Q03468 1493 aa21.28■■□□□ 1
PTPN6-212ENST00000539029 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
PTPN6-212ENST00000539029 AEBP2Q6ZN18 517 aaPredicted RBP20.91■□□□□ 0.94
PTPN6-212ENST00000539029 THOC2Q8NI27 1593 aaKnown RBP20.73■□□□□ 0.91
PTPN6-212ENST00000539029 NESP48681 1621 aa20.63■□□□□ 0.89
PTPN6-212ENST00000539029 DCAF1Q9Y4B6 1507 aa20.57■□□□□ 0.88
PTPN6-212ENST00000539029 OSCARQ8IYS5 282 aa20.52■□□□□ 0.88
PTPN6-212ENST00000539029 BAZ1AQ9NRL2 1556 aaPredicted RBP20.5■□□□□ 0.87
PTPN6-212ENST00000539029 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
PTPN6-212ENST00000539029 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
PTPN6-212ENST00000539029 RIMBP3CA6NJZ7 1639 aa20.42■□□□□ 0.86
PTPN6-212ENST00000539029 RIMBP3BA6NNM3 1639 aa20.42■□□□□ 0.86
PTPN6-212ENST00000539029 RIMBP3Q9UFD9 1639 aa20.42■□□□□ 0.86
PTPN6-212ENST00000539029 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.85
PTPN6-212ENST00000539029 TRHP20396 242 aaPredicted RBP20.39■□□□□ 0.85
PTPN6-212ENST00000539029 KIF21AQ7Z4S6 1674 aa20.33■□□□□ 0.85
PTPN6-212ENST00000539029 ILDR1Q86SU0 546 aaPredicted RBP20.31■□□□□ 0.84
PTPN6-212ENST00000539029 LAMC3Q9Y6N6 1575 aa20.28■□□□□ 0.84
PTPN6-212ENST00000539029 ATAD2BQ9ULI0 1458 aa20.21■□□□□ 0.83
PTPN6-212ENST00000539029 HMGXB3Q12766 1538 aa20.21■□□□□ 0.83
PTPN6-212ENST00000539029 PDS5BQ9NTI5 1447 aa20.2■□□□□ 0.82
PTPN6-212ENST00000539029 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
PTPN6-212ENST00000539029 CYB5RLQ6IPT4 315 aa20.13■□□□□ 0.81
PTPN6-212ENST00000539029 WDR62O43379 1518 aa20.12■□□□□ 0.81
PTPN6-212ENST00000539029 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
PTPN6-212ENST00000539029 BAZ1BQ9UIG0 1483 aaKnown RBP19.93■□□□□ 0.78
PTPN6-212ENST00000539029 ARAP1Q96P48 1450 aa19.88■□□□□ 0.77
PTPN6-212ENST00000539029 SMARCA4P51532 1647 aa19.82■□□□□ 0.76
PTPN6-212ENST00000539029 CADPSQ9ULU8 1353 aa19.8■□□□□ 0.76
PTPN6-212ENST00000539029 CEP164Q9UPV0 1460 aa19.73■□□□□ 0.75
PTPN6-212ENST00000539029 PEG3Q9GZU2 1588 aa19.65■□□□□ 0.74
PTPN6-212ENST00000539029 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
PTPN6-212ENST00000539029 FANCD2Q9BXW9 1451 aa19.57■□□□□ 0.72
PTPN6-212ENST00000539029 URB2Q14146 1524 aaKnown RBP19.5■□□□□ 0.71
PTPN6-212ENST00000539029 ZNF608Q9ULD9 1512 aaPredicted RBP19.5■□□□□ 0.71
PTPN6-212ENST00000539029 CHD1O14646 1710 aa19.48■□□□□ 0.71
PTPN6-212ENST00000539029 IFT140Q96RY7 1462 aa19.4■□□□□ 0.7
PTPN6-212ENST00000539029 KDM4FA0A1W2PPD8 638 aa19.38■□□□□ 0.69
PTPN6-212ENST00000539029 EIF4G3O43432 1585 aaKnown RBP19.32■□□□□ 0.68
PTPN6-212ENST00000539029 FBLN2P98095 1184 aa19.3■□□□□ 0.68
PTPN6-212ENST00000539029 FBXO41Q8TF61 875 aa19.26■□□□□ 0.67
PTPN6-212ENST00000539029 CFTRP13569 1480 aa19.26■□□□□ 0.67
PTPN6-212ENST00000539029 ERCC6L2Q5T890 1561 aa19.24■□□□□ 0.67
PTPN6-212ENST00000539029 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
PTPN6-212ENST00000539029 LMTK3Q96Q04 1460 aa19.22■□□□□ 0.67
PTPN6-212ENST00000539029 CLASP1Q7Z460 1538 aa19.21■□□□□ 0.67
PTPN6-212ENST00000539029 AQRO60306 1485 aaKnown RBP eCLIP19.14■□□□□ 0.65
PTPN6-212ENST00000539029 SOCS7O14512 581 aa19.13■□□□□ 0.65
PTPN6-212ENST00000539029 GAPVD1Q14C86 1478 aa19.13■□□□□ 0.65
PTPN6-212ENST00000539029 KIF13AQ9H1H9 1805 aa19.11■□□□□ 0.65
PTPN6-212ENST00000539029 HECW2Q9P2P5 1572 aa19.1■□□□□ 0.65
PTPN6-212ENST00000539029 SYNJ1O43426 1573 aa19.07■□□□□ 0.64
PTPN6-212ENST00000539029 TOPBP1Q92547 1522 aa19.04■□□□□ 0.64
PTPN6-212ENST00000539029 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
PTPN6-212ENST00000539029 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
PTPN6-212ENST00000539029 ILDR2Q71H61 639 aa18.95■□□□□ 0.62
PTPN6-212ENST00000539029 WIZO95785 1651 aa18.93■□□□□ 0.62
PTPN6-212ENST00000539029 CHMP7Q8WUX9 453 aaPredicted RBP18.93■□□□□ 0.62
PTPN6-212ENST00000539029 KDM6BO15054 1643 aa18.92■□□□□ 0.62
PTPN6-212ENST00000539029 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
PTPN6-212ENST00000539029 SNAPC4Q5SXM2 1469 aa18.9■□□□□ 0.62
PTPN6-212ENST00000539029 SYNJ2O15056 1496 aa18.87■□□□□ 0.61
PTPN6-212ENST00000539029 ADGRL1O94910 1474 aa18.87■□□□□ 0.61
PTPN6-212ENST00000539029 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
PTPN6-212ENST00000539029 FAM69CQ0P6D2 419 aa18.82■□□□□ 0.6
PTPN6-212ENST00000539029 MAGI1Q96QZ7 1491 aaPredicted RBP18.8■□□□□ 0.6
PTPN6-212ENST00000539029 DISP3Q9P2K9 1392 aa18.79■□□□□ 0.6
PTPN6-212ENST00000539029 ABCC10Q5T3U5 1492 aa18.78■□□□□ 0.6
PTPN6-212ENST00000539029 TDRD9Q8NDG6 1382 aaKnown RBP18.78■□□□□ 0.6
PTPN6-212ENST00000539029 POLA1P09884 1462 aaPredicted RBP18.74■□□□□ 0.59
PTPN6-212ENST00000539029 WDR97A6NE52 1622 aa18.71■□□□□ 0.58
PTPN6-212ENST00000539029 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
PTPN6-212ENST00000539029 DIP2BQ9P265 1576 aa18.68■□□□□ 0.58
PTPN6-212ENST00000539029 TSPOAP1O95153 1857 aa18.66■□□□□ 0.58
PTPN6-212ENST00000539029 GRIN2BQ13224 1484 aa18.65■□□□□ 0.58
PTPN6-212ENST00000539029 SOGA1O94964 1423 aa18.63■□□□□ 0.57
PTPN6-212ENST00000539029 CEP170Q5SW79 1584 aa18.62■□□□□ 0.57
PTPN6-212ENST00000539029 MAPKBP1O60336 1514 aa18.6■□□□□ 0.57
PTPN6-212ENST00000539029 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
PTPN6-212ENST00000539029 NPM1P06748 294 aaKnown RBP eCLIP18.53■□□□□ 0.56
PTPN6-212ENST00000539029 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
PTPN6-212ENST00000539029 PBRM1Q86U86 1689 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms