RNA–Protein interactions for RNA: ENST00000538979.5

SCNN1A-212, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 771 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-212ENST00000538979 NISCHQ9Y2I1 1504 aa36.89■■■■□ 3.5
SCNN1A-212ENST00000538979 CCDC180Q9P1Z9 1646 aa33.35■■■□□ 2.93
SCNN1A-212ENST00000538979 ABCC9O60706 1549 aa33.15■■■□□ 2.9
SCNN1A-212ENST00000538979 RB1CC1Q8TDY2 1594 aa31.72■■■□□ 2.67
SCNN1A-212ENST00000538979 NACADO15069 1562 aa31.45■■■□□ 2.63
SCNN1A-212ENST00000538979 DCAF8L2P0C7V8 631 aa31.1■■■□□ 2.57
SCNN1A-212ENST00000538979 MYO15BQ96JP2 1530 aa30.99■■■□□ 2.55
SCNN1A-212ENST00000538979 UNC13AQ9UPW8 1703 aa30.99■■■□□ 2.55
SCNN1A-212ENST00000538979 DNAJC5BQ9UF47 199 aa30.88■■■□□ 2.53
SCNN1A-212ENST00000538979 PABPN1Q86U42 306 aaKnown RBP eCLIP30.72■■■□□ 2.51
SCNN1A-212ENST00000538979 BICRAQ9NZM4 1560 aa30.61■■■□□ 2.49
SCNN1A-212ENST00000538979 ZCCHC6Q5VYS8 1495 aaKnown RBP30.58■■■□□ 2.49
SCNN1A-212ENST00000538979 DCAF1Q9Y4B6 1507 aa30.55■■■□□ 2.48
SCNN1A-212ENST00000538979 SHROOM4Q9ULL8 1493 aa30.42■■■□□ 2.46
SCNN1A-212ENST00000538979 SCRIBQ14160 1630 aa30.23■■■□□ 2.43
SCNN1A-212ENST00000538979 CC2D2AQ9P2K1 1620 aa30.02■■■□□ 2.4
SCNN1A-212ENST00000538979 EIF4G1Q04637 1599 aaKnown RBP29.95■■■□□ 2.39
SCNN1A-212ENST00000538979 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
SCNN1A-212ENST00000538979 NCAPD3P42695 1498 aa28.91■■■□□ 2.22
SCNN1A-212ENST00000538979 SMARCA2P51531 1590 aa28.88■■■□□ 2.21
SCNN1A-212ENST00000538979 SMARCA4P51532 1647 aa28.86■■■□□ 2.21
SCNN1A-212ENST00000538979 HMGXB3Q12766 1538 aa28.81■■■□□ 2.2
SCNN1A-212ENST00000538979 ATAD2BQ9ULI0 1458 aa28.8■■■□□ 2.2
SCNN1A-212ENST00000538979 ERCC6Q03468 1493 aa28.76■■■□□ 2.19
SCNN1A-212ENST00000538979 BAZ1AQ9NRL2 1556 aaPredicted RBP28.75■■■□□ 2.19
SCNN1A-212ENST00000538979 CUX2O14529 1486 aa28.72■■■□□ 2.19
SCNN1A-212ENST00000538979 BAZ1BQ9UIG0 1483 aaKnown RBP28.62■■■□□ 2.17
SCNN1A-212ENST00000538979 DNAJC5Q9H3Z4 198 aa28.59■■■□□ 2.17
SCNN1A-212ENST00000538979 PEG3Q9GZU2 1588 aa28.58■■■□□ 2.17
SCNN1A-212ENST00000538979 LAMC3Q9Y6N6 1575 aa28.42■■■□□ 2.14
SCNN1A-212ENST00000538979 NESP48681 1621 aa28.4■■■□□ 2.14
SCNN1A-212ENST00000538979 MROH2BQ7Z745 1585 aa28.36■■■□□ 2.13
SCNN1A-212ENST00000538979 THOC2Q8NI27 1593 aaKnown RBP28.28■■■□□ 2.12
SCNN1A-212ENST00000538979 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
SCNN1A-212ENST00000538979 PDS5BQ9NTI5 1447 aa28.2■■■□□ 2.11
SCNN1A-212ENST00000538979 WIZO95785 1651 aa28.1■■■□□ 2.09
SCNN1A-212ENST00000538979 CADPSQ9ULU8 1353 aa28.02■■■□□ 2.08
SCNN1A-212ENST00000538979 MRC2Q9UBG0 1479 aa27.94■■■□□ 2.06
SCNN1A-212ENST00000538979 WDR62O43379 1518 aa27.88■■■□□ 2.05
SCNN1A-212ENST00000538979 CEP164Q9UPV0 1460 aa27.85■■■□□ 2.05
SCNN1A-212ENST00000538979 TOP2AP11388 1531 aaKnown RBP27.78■■■□□ 2.04
SCNN1A-212ENST00000538979 FANCD2Q9BXW9 1451 aa27.75■■■□□ 2.03
SCNN1A-212ENST00000538979 RSF1Q96T23 1441 aaPredicted RBP27.73■■■□□ 2.03
SCNN1A-212ENST00000538979 PRDM2Q13029 1718 aa27.72■■■□□ 2.03
SCNN1A-212ENST00000538979 CFTRP13569 1480 aa27.7■■■□□ 2.03
SCNN1A-212ENST00000538979 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
SCNN1A-212ENST00000538979 CCDC88BA6NC98 1476 aa27.35■■□□□ 1.97
SCNN1A-212ENST00000538979 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
SCNN1A-212ENST00000538979 OSCARQ8IYS5 282 aa27.31■■□□□ 1.96
SCNN1A-212ENST00000538979 ABCC8Q09428 1581 aa27.29■■□□□ 1.96
SCNN1A-212ENST00000538979 IFT140Q96RY7 1462 aa27.27■■□□□ 1.96
SCNN1A-212ENST00000538979 TOPBP1Q92547 1522 aa27.21■■□□□ 1.95
SCNN1A-212ENST00000538979 DNMBPQ6XZF7 1577 aa27.18■■□□□ 1.94
SCNN1A-212ENST00000538979 EIF4G3O43432 1585 aaKnown RBP27.13■■□□□ 1.93
SCNN1A-212ENST00000538979 ZNF608Q9ULD9 1512 aaPredicted RBP27.1■■□□□ 1.93
SCNN1A-212ENST00000538979 RIMBP3CA6NJZ7 1639 aa27.02■■□□□ 1.92
SCNN1A-212ENST00000538979 RIMBP3BA6NNM3 1639 aa27.02■■□□□ 1.92
SCNN1A-212ENST00000538979 RIMBP3Q9UFD9 1639 aa27.02■■□□□ 1.92
SCNN1A-212ENST00000538979 TARBP1Q13395 1621 aaKnown RBP26.99■■□□□ 1.91
SCNN1A-212ENST00000538979 CHD1O14646 1710 aa26.97■■□□□ 1.91
SCNN1A-212ENST00000538979 POLA1P09884 1462 aaPredicted RBP26.91■■□□□ 1.9
SCNN1A-212ENST00000538979 ARHGEF11O15085 1522 aa26.9■■□□□ 1.9
SCNN1A-212ENST00000538979 WDR97A6NE52 1622 aa26.9■■□□□ 1.9
SCNN1A-212ENST00000538979 AQRO60306 1485 aaKnown RBP eCLIP26.84■■□□□ 1.894e-8■■■■■ 31.9
SCNN1A-212ENST00000538979 SOGA1O94964 1423 aa26.78■■□□□ 1.88
SCNN1A-212ENST00000538979 FGD5Q6ZNL6 1462 aa26.75■■□□□ 1.87
SCNN1A-212ENST00000538979 FBLN2P98095 1184 aa26.74■■□□□ 1.87
SCNN1A-212ENST00000538979 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
SCNN1A-212ENST00000538979 CUX1P39880 1505 aa26.68■■□□□ 1.86
SCNN1A-212ENST00000538979 TDRD9Q8NDG6 1382 aaKnown RBP26.67■■□□□ 1.86
SCNN1A-212ENST00000538979 MAGI1Q96QZ7 1491 aaPredicted RBP26.67■■□□□ 1.86
SCNN1A-212ENST00000538979 SNAPC4Q5SXM2 1469 aa26.66■■□□□ 1.86
SCNN1A-212ENST00000538979 SYNJ1O43426 1573 aa26.66■■□□□ 1.86
SCNN1A-212ENST00000538979 PBRM1Q86U86 1689 aa26.63■■□□□ 1.85
SCNN1A-212ENST00000538979 GRIN2BQ13224 1484 aa26.62■■□□□ 1.85
SCNN1A-212ENST00000538979 CYB5RLQ6IPT4 315 aa26.61■■□□□ 1.85
SCNN1A-212ENST00000538979 ARAP1Q96P48 1450 aa26.57■■□□□ 1.84
SCNN1A-212ENST00000538979 CHMP7Q8WUX9 453 aaPredicted RBP26.56■■□□□ 1.84
SCNN1A-212ENST00000538979 CLASP1Q7Z460 1538 aa26.55■■□□□ 1.84
SCNN1A-212ENST00000538979 SYNJ2O15056 1496 aa26.55■■□□□ 1.84
SCNN1A-212ENST00000538979 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
SCNN1A-212ENST00000538979 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
SCNN1A-212ENST00000538979 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
SCNN1A-212ENST00000538979 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
SCNN1A-212ENST00000538979 TRHP20396 242 aaPredicted RBP26.42■■□□□ 1.82
SCNN1A-212ENST00000538979 BIVM-ERCC5R4GMW8 1640 aa26.39■■□□□ 1.81
SCNN1A-212ENST00000538979 WRNQ14191 1432 aaPredicted RBP eCLIP26.37■■□□□ 1.81
SCNN1A-212ENST00000538979 TOP2BQ02880 1626 aa26.34■■□□□ 1.81
SCNN1A-212ENST00000538979 ADAMTS12P58397 1594 aa26.28■■□□□ 1.8
SCNN1A-212ENST00000538979 GRIN2AQ12879 1464 aa26.27■■□□□ 1.8
SCNN1A-212ENST00000538979 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
SCNN1A-212ENST00000538979 FHAD1B1AJZ9 1412 aa26.16■■□□□ 1.78
SCNN1A-212ENST00000538979 CEP170Q5SW79 1584 aa26.15■■□□□ 1.78
SCNN1A-212ENST00000538979 NUP160Q12769 1436 aa26.14■■□□□ 1.77
SCNN1A-212ENST00000538979 SHROOM2Q13796 1616 aa26.1■■□□□ 1.77
SCNN1A-212ENST00000538979 ERCC6L2Q5T890 1561 aa26.02■■□□□ 1.76
SCNN1A-212ENST00000538979 RUSC2Q8N2Y8 1516 aa25.93■■□□□ 1.74
SCNN1A-212ENST00000538979 CUL7Q14999 1698 aa25.9■■□□□ 1.74
SCNN1A-212ENST00000538979 PRG4Q92954 1404 aaPredicted RBP25.88■■□□□ 1.73
SCNN1A-212ENST00000538979 KIF13AQ9H1H9 1805 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms