RNA–Protein interactions for RNA: ENST00000538800.1

LRRC43-205, Transcript of leucine rich repeat containing 43, humanhuman

TSL 5

Gene LRRC43, Length 472 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43-205ENST00000538800 NISCHQ9Y2I1 1504 aa42.76■■■■■ 4.44
LRRC43-205ENST00000538800 CCDC180Q9P1Z9 1646 aa38.22■■■■□ 3.71
LRRC43-205ENST00000538800 ABCC9O60706 1549 aa38.22■■■■□ 3.71
LRRC43-205ENST00000538800 RB1CC1Q8TDY2 1594 aa36.4■■■■□ 3.42
LRRC43-205ENST00000538800 NACADO15069 1562 aa36.2■■■■□ 3.39
LRRC43-205ENST00000538800 DCAF8L2P0C7V8 631 aa36.15■■■■□ 3.38
LRRC43-205ENST00000538800 DNAJC5BQ9UF47 199 aa35.84■■■■□ 3.33
LRRC43-205ENST00000538800 MYO15BQ96JP2 1530 aa35.77■■■■□ 3.32
LRRC43-205ENST00000538800 PABPN1Q86U42 306 aaKnown RBP eCLIP35.67■■■■□ 3.3
LRRC43-205ENST00000538800 ZCCHC6Q5VYS8 1495 aaKnown RBP35.43■■■■□ 3.26
LRRC43-205ENST00000538800 UNC13AQ9UPW8 1703 aa35.41■■■■□ 3.26
LRRC43-205ENST00000538800 DCAF1Q9Y4B6 1507 aa35.33■■■■□ 3.25
LRRC43-205ENST00000538800 BICRAQ9NZM4 1560 aa35.31■■■■□ 3.24
LRRC43-205ENST00000538800 SHROOM4Q9ULL8 1493 aa34.91■■■■□ 3.18
LRRC43-205ENST00000538800 SCRIBQ14160 1630 aa34.85■■■■□ 3.17
LRRC43-205ENST00000538800 CC2D2AQ9P2K1 1620 aa34.48■■■■□ 3.11
LRRC43-205ENST00000538800 EIF4G1Q04637 1599 aaKnown RBP34.45■■■■□ 3.11
LRRC43-205ENST00000538800 CECR2Q9BXF3 1484 aa34.44■■■■□ 3.1
LRRC43-205ENST00000538800 NCAPD3P42695 1498 aa33.48■■■□□ 2.95
LRRC43-205ENST00000538800 ATAD2BQ9ULI0 1458 aa33.36■■■□□ 2.93
LRRC43-205ENST00000538800 SMARCA4P51532 1647 aa33.27■■■□□ 2.92
LRRC43-205ENST00000538800 SMARCA2P51531 1590 aa33.25■■■□□ 2.91
LRRC43-205ENST00000538800 BAZ1AQ9NRL2 1556 aaPredicted RBP33.17■■■□□ 2.9
LRRC43-205ENST00000538800 HMGXB3Q12766 1538 aa33.16■■■□□ 2.9
LRRC43-205ENST00000538800 BAZ1BQ9UIG0 1483 aaKnown RBP33.03■■■□□ 2.88
LRRC43-205ENST00000538800 ERCC6Q03468 1493 aa33.01■■■□□ 2.88
LRRC43-205ENST00000538800 PEG3Q9GZU2 1588 aa32.98■■■□□ 2.87
LRRC43-205ENST00000538800 CUX2O14529 1486 aa32.93■■■□□ 2.86
LRRC43-205ENST00000538800 MROH2BQ7Z745 1585 aa32.92■■■□□ 2.86
LRRC43-205ENST00000538800 DNAJC5Q9H3Z4 198 aa32.88■■■□□ 2.85
LRRC43-205ENST00000538800 NESP48681 1621 aa32.84■■■□□ 2.85
LRRC43-205ENST00000538800 LAMC3Q9Y6N6 1575 aa32.63■■■□□ 2.81
LRRC43-205ENST00000538800 PDS5BQ9NTI5 1447 aa32.53■■■□□ 2.8
LRRC43-205ENST00000538800 CADPSQ9ULU8 1353 aa32.48■■■□□ 2.79
LRRC43-205ENST00000538800 WIZO95785 1651 aa32.48■■■□□ 2.79
LRRC43-205ENST00000538800 THOC2Q8NI27 1593 aaKnown RBP32.43■■■□□ 2.78
LRRC43-205ENST00000538800 RSF1Q96T23 1441 aaPredicted RBP32.34■■■□□ 2.77
LRRC43-205ENST00000538800 KIF21AQ7Z4S6 1674 aa32.31■■■□□ 2.76
LRRC43-205ENST00000538800 MRC2Q9UBG0 1479 aa32.18■■■□□ 2.74
LRRC43-205ENST00000538800 TOP2AP11388 1531 aaKnown RBP32.12■■■□□ 2.73
LRRC43-205ENST00000538800 CFTRP13569 1480 aa32.1■■■□□ 2.73
LRRC43-205ENST00000538800 CEP164Q9UPV0 1460 aa32.07■■■□□ 2.72
LRRC43-205ENST00000538800 WDR62O43379 1518 aa32.06■■■□□ 2.72
LRRC43-205ENST00000538800 FANCD2Q9BXW9 1451 aa32.06■■■□□ 2.72
LRRC43-205ENST00000538800 CCDC88BA6NC98 1476 aa31.81■■■□□ 2.68
LRRC43-205ENST00000538800 URB2Q14146 1524 aaKnown RBP31.76■■■□□ 2.68
LRRC43-205ENST00000538800 PRDM2Q13029 1718 aa31.57■■■□□ 2.64
LRRC43-205ENST00000538800 OSCARQ8IYS5 282 aa31.54■■■□□ 2.64
LRRC43-205ENST00000538800 IFT140Q96RY7 1462 aa31.46■■■□□ 2.63
LRRC43-205ENST00000538800 TOPBP1Q92547 1522 aa31.44■■■□□ 2.62
LRRC43-205ENST00000538800 ABCC8Q09428 1581 aa31.44■■■□□ 2.62
LRRC43-205ENST00000538800 TRIM41Q8WV44 630 aa31.44■■■□□ 2.62
LRRC43-205ENST00000538800 ZNF608Q9ULD9 1512 aaPredicted RBP31.36■■■□□ 2.61
LRRC43-205ENST00000538800 DNMBPQ6XZF7 1577 aa31.31■■■□□ 2.6
LRRC43-205ENST00000538800 AQRO60306 1485 aaKnown RBP eCLIP31.13■■■□□ 2.57
LRRC43-205ENST00000538800 POLA1P09884 1462 aaPredicted RBP31.13■■■□□ 2.57
LRRC43-205ENST00000538800 EIF4G3O43432 1585 aaKnown RBP31.12■■■□□ 2.57
LRRC43-205ENST00000538800 TARBP1Q13395 1621 aaKnown RBP31.11■■■□□ 2.57
LRRC43-205ENST00000538800 SOGA1O94964 1423 aa31.06■■■□□ 2.56
LRRC43-205ENST00000538800 RAD54L2Q9Y4B4 1467 aa31.03■■■□□ 2.56
LRRC43-205ENST00000538800 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
LRRC43-205ENST00000538800 TDRD9Q8NDG6 1382 aaKnown RBP30.98■■■□□ 2.55
LRRC43-205ENST00000538800 FBLN2P98095 1184 aa30.96■■■□□ 2.55
LRRC43-205ENST00000538800 FGD5Q6ZNL6 1462 aa30.95■■■□□ 2.54
LRRC43-205ENST00000538800 RIMBP3CA6NJZ7 1639 aa30.94■■■□□ 2.54
LRRC43-205ENST00000538800 RIMBP3BA6NNM3 1639 aa30.94■■■□□ 2.54
LRRC43-205ENST00000538800 RIMBP3Q9UFD9 1639 aa30.94■■■□□ 2.54
LRRC43-205ENST00000538800 CUX1P39880 1505 aa30.92■■■□□ 2.54
LRRC43-205ENST00000538800 ARHGEF11O15085 1522 aa30.89■■■□□ 2.54
LRRC43-205ENST00000538800 WDR97A6NE52 1622 aa30.83■■■□□ 2.53
LRRC43-205ENST00000538800 CHD1O14646 1710 aa30.81■■■□□ 2.52
LRRC43-205ENST00000538800 SNAPC4Q5SXM2 1469 aa30.77■■■□□ 2.52
LRRC43-205ENST00000538800 CYB5RLQ6IPT4 315 aa30.77■■■□□ 2.52
LRRC43-205ENST00000538800 CHMP7Q8WUX9 453 aaPredicted RBP30.77■■■□□ 2.52
LRRC43-205ENST00000538800 GRIN2BQ13224 1484 aa30.75■■■□□ 2.51
LRRC43-205ENST00000538800 MAGI1Q96QZ7 1491 aaPredicted RBP30.72■■■□□ 2.51
LRRC43-205ENST00000538800 GAPVD1Q14C86 1478 aa30.64■■■□□ 2.5
LRRC43-205ENST00000538800 SYNJ2O15056 1496 aa30.63■■■□□ 2.49
LRRC43-205ENST00000538800 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
LRRC43-205ENST00000538800 ARAP1Q96P48 1450 aa30.6■■■□□ 2.49
LRRC43-205ENST00000538800 SYNJ1O43426 1573 aa30.57■■■□□ 2.48
LRRC43-205ENST00000538800 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
LRRC43-205ENST00000538800 CLASP1Q7Z460 1538 aa30.56■■■□□ 2.48
LRRC43-205ENST00000538800 ABCA5Q8WWZ7 1642 aa30.49■■■□□ 2.47
LRRC43-205ENST00000538800 PBRM1Q86U86 1689 aa30.47■■■□□ 2.47
LRRC43-205ENST00000538800 TOP2BQ02880 1626 aa30.44■■■□□ 2.46
LRRC43-205ENST00000538800 BIVM-ERCC5R4GMW8 1640 aa30.4■■■□□ 2.46
LRRC43-205ENST00000538800 TRHP20396 242 aaPredicted RBP30.4■■■□□ 2.46
LRRC43-205ENST00000538800 GRIN2AQ12879 1464 aa30.32■■■□□ 2.44
LRRC43-205ENST00000538800 FHAD1B1AJZ9 1412 aa30.29■■■□□ 2.44
LRRC43-205ENST00000538800 ADAMTS12P58397 1594 aa30.26■■■□□ 2.43
LRRC43-205ENST00000538800 NUP160Q12769 1436 aa30.23■■■□□ 2.43
LRRC43-205ENST00000538800 ERICH3Q5RHP9 1530 aa30.23■■■□□ 2.43
LRRC43-205ENST00000538800 CEP170Q5SW79 1584 aa30.16■■■□□ 2.42
LRRC43-205ENST00000538800 ERCC6L2Q5T890 1561 aa30.07■■■□□ 2.4
LRRC43-205ENST00000538800 JPH4Q96JJ6 628 aa30.02■■■□□ 2.4
LRRC43-205ENST00000538800 SHROOM2Q13796 1616 aa30.01■■■□□ 2.39
LRRC43-205ENST00000538800 PRG4Q92954 1404 aaPredicted RBP29.96■■■□□ 2.39
LRRC43-205ENST00000538800 IGF1RP08069 1367 aa29.95■■■□□ 2.39
LRRC43-205ENST00000538800 KIF27Q86VH2 1401 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms