RNA–Protein interactions for RNA: ENST00000538783.1

LINC02439-201, Transcript of long intergenic non-protein coding RNA 2439, humanhuman

TSL 3 BASIC

Gene LINC02439, Length 450 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02439-201ENST00000538783 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
LINC02439-201ENST00000538783 ABCC9O60706 1549 aa21.04■□□□□ 0.96
LINC02439-201ENST00000538783 CCDC180Q9P1Z9 1646 aa20.92■□□□□ 0.94
LINC02439-201ENST00000538783 DCAF8L2P0C7V8 631 aa20■□□□□ 0.79
LINC02439-201ENST00000538783 RB1CC1Q8TDY2 1594 aa20■□□□□ 0.79
LINC02439-201ENST00000538783 NACADO15069 1562 aa19.86■□□□□ 0.77
LINC02439-201ENST00000538783 DNAJC5BQ9UF47 199 aa19.71■□□□□ 0.75
LINC02439-201ENST00000538783 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.74
LINC02439-201ENST00000538783 MYO15BQ96JP2 1530 aa19.57■□□□□ 0.72
LINC02439-201ENST00000538783 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
LINC02439-201ENST00000538783 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
LINC02439-201ENST00000538783 DCAF1Q9Y4B6 1507 aa19.33■□□□□ 0.68
LINC02439-201ENST00000538783 BICRAQ9NZM4 1560 aa19.32■□□□□ 0.68
LINC02439-201ENST00000538783 SHROOM4Q9ULL8 1493 aa19.15■□□□□ 0.66
LINC02439-201ENST00000538783 SCRIBQ14160 1630 aa19.14■□□□□ 0.65
LINC02439-201ENST00000538783 CECR2Q9BXF3 1484 aa18.96■□□□□ 0.63
LINC02439-201ENST00000538783 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
LINC02439-201ENST00000538783 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
LINC02439-201ENST00000538783 NCAPD3P42695 1498 aa18.36■□□□□ 0.53
LINC02439-201ENST00000538783 ATAD2BQ9ULI0 1458 aa18.3■□□□□ 0.52
LINC02439-201ENST00000538783 SMARCA2P51531 1590 aa18.25■□□□□ 0.51
LINC02439-201ENST00000538783 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
LINC02439-201ENST00000538783 ERCC6Q03468 1493 aa18.21■□□□□ 0.51
LINC02439-201ENST00000538783 BAZ1AQ9NRL2 1556 aaPredicted RBP18.2■□□□□ 0.5
LINC02439-201ENST00000538783 HMGXB3Q12766 1538 aa18.17■□□□□ 0.5
LINC02439-201ENST00000538783 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
LINC02439-201ENST00000538783 DNAJC5Q9H3Z4 198 aa18.14■□□□□ 0.49
LINC02439-201ENST00000538783 CUX2O14529 1486 aa18.1■□□□□ 0.49
LINC02439-201ENST00000538783 NESP48681 1621 aa18.04■□□□□ 0.48
LINC02439-201ENST00000538783 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
LINC02439-201ENST00000538783 PEG3Q9GZU2 1588 aa18.04■□□□□ 0.48
LINC02439-201ENST00000538783 PDS5BQ9NTI5 1447 aa17.9■□□□□ 0.46
LINC02439-201ENST00000538783 LAMC3Q9Y6N6 1575 aa17.9■□□□□ 0.46
LINC02439-201ENST00000538783 CADPSQ9ULU8 1353 aa17.85■□□□□ 0.45
LINC02439-201ENST00000538783 WIZO95785 1651 aa17.78■□□□□ 0.44
LINC02439-201ENST00000538783 THOC2Q8NI27 1593 aaKnown RBP17.76■□□□□ 0.43
LINC02439-201ENST00000538783 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
LINC02439-201ENST00000538783 KIF21AQ7Z4S6 1674 aa17.71■□□□□ 0.42
LINC02439-201ENST00000538783 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
LINC02439-201ENST00000538783 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
LINC02439-201ENST00000538783 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
LINC02439-201ENST00000538783 TOP2AP11388 1531 aaKnown RBP17.61■□□□□ 0.41
LINC02439-201ENST00000538783 CFTRP13569 1480 aa17.6■□□□□ 0.41
LINC02439-201ENST00000538783 WDR62O43379 1518 aa17.58■□□□□ 0.41
LINC02439-201ENST00000538783 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
LINC02439-201ENST00000538783 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
LINC02439-201ENST00000538783 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
LINC02439-201ENST00000538783 OSCARQ8IYS5 282 aa17.41■□□□□ 0.38
LINC02439-201ENST00000538783 IFT140Q96RY7 1462 aa17.3■□□□□ 0.36
LINC02439-201ENST00000538783 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
LINC02439-201ENST00000538783 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
LINC02439-201ENST00000538783 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
LINC02439-201ENST00000538783 ZNF608Q9ULD9 1512 aaPredicted RBP17.22■□□□□ 0.35
LINC02439-201ENST00000538783 DNMBPQ6XZF7 1577 aa17.18■□□□□ 0.34
LINC02439-201ENST00000538783 FBLN2P98095 1184 aa17.13■□□□□ 0.33
LINC02439-201ENST00000538783 AQRO60306 1485 aaKnown RBP eCLIP17.12■□□□□ 0.33
LINC02439-201ENST00000538783 SUPT5HO00267 1087 aaKnown RBP17.11■□□□□ 0.33
LINC02439-201ENST00000538783 POLA1P09884 1462 aaPredicted RBP17.09■□□□□ 0.33
LINC02439-201ENST00000538783 SOGA1O94964 1423 aa17.08■□□□□ 0.32
LINC02439-201ENST00000538783 EIF4G3O43432 1585 aaKnown RBP17.07■□□□□ 0.32
LINC02439-201ENST00000538783 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
LINC02439-201ENST00000538783 TDRD9Q8NDG6 1382 aaKnown RBP17.04■□□□□ 0.32
LINC02439-201ENST00000538783 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
LINC02439-201ENST00000538783 CYB5RLQ6IPT4 315 aa17■□□□□ 0.31
LINC02439-201ENST00000538783 RIMBP3CA6NJZ7 1639 aa16.99■□□□□ 0.31
LINC02439-201ENST00000538783 RIMBP3BA6NNM3 1639 aa16.99■□□□□ 0.31
LINC02439-201ENST00000538783 RIMBP3Q9UFD9 1639 aa16.99■□□□□ 0.31
LINC02439-201ENST00000538783 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
LINC02439-201ENST00000538783 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
LINC02439-201ENST00000538783 ARHGEF11O15085 1522 aa16.98■□□□□ 0.31
LINC02439-201ENST00000538783 CUX1P39880 1505 aa16.94■□□□□ 0.3
LINC02439-201ENST00000538783 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
LINC02439-201ENST00000538783 GRIN2BQ13224 1484 aa16.91■□□□□ 0.3
LINC02439-201ENST00000538783 WDR97A6NE52 1622 aa16.89■□□□□ 0.29
LINC02439-201ENST00000538783 CHD1O14646 1710 aa16.89■□□□□ 0.29
LINC02439-201ENST00000538783 MAGI1Q96QZ7 1491 aaPredicted RBP16.87■□□□□ 0.29
LINC02439-201ENST00000538783 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
LINC02439-201ENST00000538783 GAPVD1Q14C86 1478 aa16.84■□□□□ 0.29
LINC02439-201ENST00000538783 SYNJ2O15056 1496 aa16.82■□□□□ 0.28
LINC02439-201ENST00000538783 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
LINC02439-201ENST00000538783 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
LINC02439-201ENST00000538783 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
LINC02439-201ENST00000538783 ABCA10Q8WWZ4 1543 aa16.79■□□□□ 0.28
LINC02439-201ENST00000538783 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
LINC02439-201ENST00000538783 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
LINC02439-201ENST00000538783 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
LINC02439-201ENST00000538783 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
LINC02439-201ENST00000538783 GRIN2AQ12879 1464 aa16.66■□□□□ 0.26
LINC02439-201ENST00000538783 FHAD1B1AJZ9 1412 aa16.64■□□□□ 0.25
LINC02439-201ENST00000538783 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
LINC02439-201ENST00000538783 NUP160Q12769 1436 aa16.58■□□□□ 0.24
LINC02439-201ENST00000538783 ERICH3Q5RHP9 1530 aa16.58■□□□□ 0.24
LINC02439-201ENST00000538783 ADAMTS12P58397 1594 aa16.58■□□□□ 0.24
LINC02439-201ENST00000538783 CEP170Q5SW79 1584 aa16.53■□□□□ 0.24
LINC02439-201ENST00000538783 JPH4Q96JJ6 628 aa16.52■□□□□ 0.24
LINC02439-201ENST00000538783 ERCC6L2Q5T890 1561 aa16.49■□□□□ 0.23
LINC02439-201ENST00000538783 PRG4Q92954 1404 aaPredicted RBP16.49■□□□□ 0.23
LINC02439-201ENST00000538783 KIF27Q86VH2 1401 aa16.47■□□□□ 0.23
LINC02439-201ENST00000538783 IGF1RP08069 1367 aa16.44■□□□□ 0.22
LINC02439-201ENST00000538783 NPM1P06748 294 aaKnown RBP eCLIP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms