RNA–Protein interactions for RNA: ENST00000538772.1

AP001880.1-201, humanhuman

BASIC

Gene AP001880.1, Length 421 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001880.1-201ENST00000538772 NISCHQ9Y2I1 1504 aa24.9■■□□□ 1.58
AP001880.1-201ENST00000538772 CCDC180Q9P1Z9 1646 aa22.4■■□□□ 1.18
AP001880.1-201ENST00000538772 ABCC9O60706 1549 aa21.93■■□□□ 1.1
AP001880.1-201ENST00000538772 RB1CC1Q8TDY2 1594 aa21.11■□□□□ 0.97
AP001880.1-201ENST00000538772 NACADO15069 1562 aa21.03■□□□□ 0.96
AP001880.1-201ENST00000538772 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
AP001880.1-201ENST00000538772 UNC13AQ9UPW8 1703 aa20.79■□□□□ 0.92
AP001880.1-201ENST00000538772 DCAF8L2P0C7V8 631 aa20.7■□□□□ 0.9
AP001880.1-201ENST00000538772 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
AP001880.1-201ENST00000538772 DCAF1Q9Y4B6 1507 aa20.66■□□□□ 0.9
AP001880.1-201ENST00000538772 BICRAQ9NZM4 1560 aa20.5■□□□□ 0.87
AP001880.1-201ENST00000538772 PABPN1Q86U42 306 aaKnown RBP eCLIP20.37■□□□□ 0.85
AP001880.1-201ENST00000538772 DNAJC5BQ9UF47 199 aa20.34■□□□□ 0.85
AP001880.1-201ENST00000538772 SHROOM4Q9ULL8 1493 aa20.29■□□□□ 0.84
AP001880.1-201ENST00000538772 SCRIBQ14160 1630 aa20.25■□□□□ 0.83
AP001880.1-201ENST00000538772 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
AP001880.1-201ENST00000538772 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
AP001880.1-201ENST00000538772 CECR2Q9BXF3 1484 aa19.76■□□□□ 0.75
AP001880.1-201ENST00000538772 SMARCA4P51532 1647 aa19.42■□□□□ 0.7
AP001880.1-201ENST00000538772 NCAPD3P42695 1498 aa19.36■□□□□ 0.69
AP001880.1-201ENST00000538772 SMARCA2P51531 1590 aa19.33■□□□□ 0.69
AP001880.1-201ENST00000538772 BAZ1AQ9NRL2 1556 aaPredicted RBP19.33■□□□□ 0.69
AP001880.1-201ENST00000538772 ATAD2BQ9ULI0 1458 aa19.3■□□□□ 0.68
AP001880.1-201ENST00000538772 HMGXB3Q12766 1538 aa19.3■□□□□ 0.68
AP001880.1-201ENST00000538772 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.68
AP001880.1-201ENST00000538772 MROH2BQ7Z745 1585 aa19.15■□□□□ 0.66
AP001880.1-201ENST00000538772 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
AP001880.1-201ENST00000538772 WIZO95785 1651 aa18.99■□□□□ 0.63
AP001880.1-201ENST00000538772 LAMC3Q9Y6N6 1575 aa18.96■□□□□ 0.63
AP001880.1-201ENST00000538772 NESP48681 1621 aa18.92■□□□□ 0.62
AP001880.1-201ENST00000538772 ERCC6Q03468 1493 aa18.92■□□□□ 0.62
AP001880.1-201ENST00000538772 CUX2O14529 1486 aa18.91■□□□□ 0.62
AP001880.1-201ENST00000538772 KIF21AQ7Z4S6 1674 aa18.85■□□□□ 0.61
AP001880.1-201ENST00000538772 RSF1Q96T23 1441 aaPredicted RBP18.82■□□□□ 0.6
AP001880.1-201ENST00000538772 THOC2Q8NI27 1593 aaKnown RBP18.81■□□□□ 0.6
AP001880.1-201ENST00000538772 TOP2AP11388 1531 aaKnown RBP18.75■□□□□ 0.59
AP001880.1-201ENST00000538772 PDS5BQ9NTI5 1447 aa18.74■□□□□ 0.59
AP001880.1-201ENST00000538772 CADPSQ9ULU8 1353 aa18.73■□□□□ 0.59
AP001880.1-201ENST00000538772 PRDM2Q13029 1718 aa18.69■□□□□ 0.58
AP001880.1-201ENST00000538772 CFTRP13569 1480 aa18.61■□□□□ 0.57
AP001880.1-201ENST00000538772 MRC2Q9UBG0 1479 aa18.58■□□□□ 0.56
AP001880.1-201ENST00000538772 DNAJC5Q9H3Z4 198 aa18.57■□□□□ 0.56
AP001880.1-201ENST00000538772 WDR62O43379 1518 aa18.57■□□□□ 0.56
AP001880.1-201ENST00000538772 CEP164Q9UPV0 1460 aa18.55■□□□□ 0.56
AP001880.1-201ENST00000538772 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.56
AP001880.1-201ENST00000538772 CCDC88BA6NC98 1476 aa18.49■□□□□ 0.55
AP001880.1-201ENST00000538772 URB2Q14146 1524 aaKnown RBP18.38■□□□□ 0.53
AP001880.1-201ENST00000538772 ABCC8Q09428 1581 aa18.26■□□□□ 0.51
AP001880.1-201ENST00000538772 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
AP001880.1-201ENST00000538772 DNMBPQ6XZF7 1577 aa18.22■□□□□ 0.51
AP001880.1-201ENST00000538772 IFT140Q96RY7 1462 aa18.17■□□□□ 0.5
AP001880.1-201ENST00000538772 TARBP1Q13395 1621 aaKnown RBP18.12■□□□□ 0.49
AP001880.1-201ENST00000538772 EIF4G3O43432 1585 aaKnown RBP18.08■□□□□ 0.49
AP001880.1-201ENST00000538772 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.48
AP001880.1-201ENST00000538772 POLA1P09884 1462 aaPredicted RBP18.04■□□□□ 0.48
AP001880.1-201ENST00000538772 WDR97A6NE52 1622 aa18.02■□□□□ 0.48
AP001880.1-201ENST00000538772 SUPT5HO00267 1087 aaKnown RBP18■□□□□ 0.47
AP001880.1-201ENST00000538772 CUX1P39880 1505 aa17.99■□□□□ 0.47
AP001880.1-201ENST00000538772 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
AP001880.1-201ENST00000538772 CHD1O14646 1710 aa17.98■□□□□ 0.47
AP001880.1-201ENST00000538772 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
AP001880.1-201ENST00000538772 SOGA1O94964 1423 aa17.93■□□□□ 0.46
AP001880.1-201ENST00000538772 AQRO60306 1485 aaKnown RBP eCLIP17.92■□□□□ 0.46
AP001880.1-201ENST00000538772 RAD54L2Q9Y4B4 1467 aa17.92■□□□□ 0.46
AP001880.1-201ENST00000538772 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
AP001880.1-201ENST00000538772 PBRM1Q86U86 1689 aa17.87■□□□□ 0.45
AP001880.1-201ENST00000538772 RIMBP3CA6NJZ7 1639 aa17.84■□□□□ 0.45
AP001880.1-201ENST00000538772 RIMBP3BA6NNM3 1639 aa17.84■□□□□ 0.45
AP001880.1-201ENST00000538772 RIMBP3Q9UFD9 1639 aa17.84■□□□□ 0.45
AP001880.1-201ENST00000538772 TOP2BQ02880 1626 aa17.83■□□□□ 0.45
AP001880.1-201ENST00000538772 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
AP001880.1-201ENST00000538772 ABCA5Q8WWZ7 1642 aa17.81■□□□□ 0.44
AP001880.1-201ENST00000538772 ABCA10Q8WWZ4 1543 aa17.8■□□□□ 0.44
AP001880.1-201ENST00000538772 MAGI1Q96QZ7 1491 aaPredicted RBP17.8■□□□□ 0.44
AP001880.1-201ENST00000538772 GRIN2BQ13224 1484 aa17.79■□□□□ 0.44
AP001880.1-201ENST00000538772 SNAPC4Q5SXM2 1469 aa17.77■□□□□ 0.44
AP001880.1-201ENST00000538772 SYNJ1O43426 1573 aa17.77■□□□□ 0.44
AP001880.1-201ENST00000538772 ARHGEF11O15085 1522 aa17.76■□□□□ 0.43
AP001880.1-201ENST00000538772 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
AP001880.1-201ENST00000538772 WRNQ14191 1432 aaPredicted RBP eCLIP17.74■□□□□ 0.43
AP001880.1-201ENST00000538772 TRIM41Q8WV44 630 aa17.73■□□□□ 0.43
AP001880.1-201ENST00000538772 SYNJ2O15056 1496 aa17.71■□□□□ 0.43
AP001880.1-201ENST00000538772 CLASP1Q7Z460 1538 aa17.71■□□□□ 0.43
AP001880.1-201ENST00000538772 FBLN2P98095 1184 aa17.67■□□□□ 0.42
AP001880.1-201ENST00000538772 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
AP001880.1-201ENST00000538772 ADAMTS12P58397 1594 aa17.62■□□□□ 0.41
AP001880.1-201ENST00000538772 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
AP001880.1-201ENST00000538772 ARAP1Q96P48 1450 aa17.57■□□□□ 0.4
AP001880.1-201ENST00000538772 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
AP001880.1-201ENST00000538772 FHAD1B1AJZ9 1412 aa17.53■□□□□ 0.4
AP001880.1-201ENST00000538772 CEP170Q5SW79 1584 aa17.51■□□□□ 0.39
AP001880.1-201ENST00000538772 NUP160Q12769 1436 aa17.5■□□□□ 0.39
AP001880.1-201ENST00000538772 CYB5RLQ6IPT4 315 aa17.5■□□□□ 0.39
AP001880.1-201ENST00000538772 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
AP001880.1-201ENST00000538772 CUL7Q14999 1698 aa17.45■□□□□ 0.38
AP001880.1-201ENST00000538772 KIF27Q86VH2 1401 aa17.39■□□□□ 0.38
AP001880.1-201ENST00000538772 RUSC2Q8N2Y8 1516 aa17.38■□□□□ 0.37
AP001880.1-201ENST00000538772 ERCC6L2Q5T890 1561 aa17.38■□□□□ 0.37
AP001880.1-201ENST00000538772 IGF1RP08069 1367 aa17.34■□□□□ 0.37
AP001880.1-201ENST00000538772 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms